4.7 Article

Weak supervision as an efficient approach for automated seizure detection in electroencephalography

Journal

NPJ DIGITAL MEDICINE
Volume 3, Issue 1, Pages -

Publisher

NATURE PORTFOLIO
DOI: 10.1038/s41746-020-0264-0

Keywords

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Funding

  1. DARPA [FA87501720095, FA86501827865, FA86501827882]
  2. NIH [U54EB020405]
  3. NSF [CCF1763315, CCF1563078]
  4. ONR [N000141712266]
  5. Moore Foundation
  6. NXP
  7. Xilinx
  8. LETI-CEA
  9. Intel
  10. Microsoft
  11. NEC
  12. Toshiba
  13. TSMC
  14. ARM
  15. Hitachi
  16. BASF
  17. Accenture
  18. Ericsson
  19. Qualcomm
  20. Analog Devices
  21. Okawa Foundation
  22. American Family Insurance
  23. Google Cloud
  24. Swiss Re
  25. Teradata
  26. Facebook
  27. Google
  28. Ant Financial
  29. SAP
  30. VMWare
  31. Infosys
  32. Wu Tsai Neurotranslate Grant
  33. LVIS LLC

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Automated seizure detection from electroencephalography (EEG) would improve the quality of patient care while reducing medical costs, but achieving reliably high performance across patients has proven difficult. Convolutional Neural Networks (CNNs) show promise in addressing this problem, but they are limited by a lack of large labeled training datasets. We propose using imperfect but plentiful archived annotations to train CNNs for automated, real-time EEG seizure detection across patients. While these weak annotations indicate possible seizures with precision scores as low as 0.37, they are commonly produced in large volumes within existing clinical workflows by a mixed group of technicians, fellows, students, and board-certified epileptologists. We find that CNNs trained using such weak annotations achieve Area Under the Receiver Operating Characteristic curve (AUROC) values of 0.93 and 0.94 for pediatric and adult seizure onset detection, respectively. Compared to currently deployed clinical software, our model provides a 31% increase (18 points) in F1-score for pediatric patients and a 17% increase (11 points) for adult patients. These results demonstrate that weak annotations, which are sustainably collected via existing clinical workflows, can be leveraged to produce clinically useful seizure detection models.

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