4.8 Article

Genomics and metagenomics of trimethylamine-utilizing Archaea in the human gut microbiome

Related references

Note: Only part of the references are listed.
Article Biochemistry & Molecular Biology

Gut Microbial Metabolite TMAO Enhances Platelet Hyperreactivity and Thrombosis Risk

Weifei Zhu et al.

Review Biochemistry & Molecular Biology

BlastKOALA and GhostKOALA: KEGG Tools for Functional Characterization of Genome and Metagenome Sequences

Minoru Kanehisa et al.

JOURNAL OF MOLECULAR BIOLOGY (2016)

Article Multidisciplinary Sciences

Population-level analysis of gut microbiome variation

Gwen Falony et al.

SCIENCE (2016)

Review Microbiology

Microbiology Meets Big Data: The Case of Gut Microbiota-Derived Trimethylamine

Gwen Falony et al.

ANNUAL REVIEW OF MICROBIOLOGY, VOL 69 (2015)

Article Multidisciplinary Sciences

Disentangling type 2 diabetes and metformin treatment signatures in the human gut microbiota

Kristoffer Forslund et al.

NATURE (2015)

Editorial Material Multidisciplinary Sciences

Gut microbiota and aging

Paul W. O'Toole et al.

SCIENCE (2015)

Article Multidisciplinary Sciences

Reduction of butyrate- and methane-producing microorganisms in patients with Irritable Bowel Syndrome

Marta Pozuelo et al.

SCIENTIFIC REPORTS (2015)

Article Microbiology

Archaea in and on the Human Body: Health Implications and Future Directions

Mor N. Lurie-Weinberger et al.

PLOS PATHOGENS (2015)

Article Microbiology

Rumen microbial communities influence metabolic phenotypes in lambs

Diego P. Morgavi et al.

FRONTIERS IN MICROBIOLOGY (2015)

Article Multidisciplinary Sciences

The microbiome of uncontacted Amerindians

Jose C. Clemente et al.

SCIENCE ADVANCES (2015)

Article Multidisciplinary Sciences

Global prevalence and distribution of genes and microorganisms involved in mercury methylation

Mircea Podar et al.

SCIENCE ADVANCES (2015)

Article Biotechnology & Applied Microbiology

New Mode of Energy Metabolism in the Seventh Order of Methanogens as Revealed by Comparative Genome Analysis of Candidatus Methanoplasma termitum

Kristina Lang et al.

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2015)

Review Microbiology

Archaea associated with human surfaces: not to be underestimated

Corinna Bang et al.

FEMS MICROBIOLOGY REVIEWS (2015)

Article Biochemistry & Molecular Biology

Human Genetics Shape the Gut Microbiome

Julia K. Goodrich et al.

Article Biotechnology & Applied Microbiology

Identification and assembly of genomes and genetic elements in complex metagenomic samples without using reference genomes

H. Bjorn Nielsen et al.

NATURE BIOTECHNOLOGY (2014)

Article Multidisciplinary Sciences

Increased Prevalence of Methanosphaera stadtmanae in Inflammatory Bowel Diseases

Pascale Blais Lecours et al.

PLOS ONE (2014)

Article Multidisciplinary Sciences

Carnitine metabolism to trimethylamine by an unusual Rieske-type oxygenase from human microbiota

Yijun Zhu et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2014)

Article Environmental Sciences

Age dependent breath methane in the German population

Daniela Polag et al.

SCIENCE OF THE TOTAL ENVIRONMENT (2014)

Article Gastroenterology & Hepatology

Archaea and the human gut: New beginning of an old story

Nadia Gaci et al.

WORLD JOURNAL OF GASTROENTEROLOGY (2014)

Article Multidisciplinary Sciences

Richness of human gut microbiome correlates with metabolic markers

Emmanuelle Le Chatelier et al.

NATURE (2013)

Article Biochemistry & Molecular Biology

Intestinal microbiota metabolism of L-carnitine, a nutrient in red meat, promotes atherosclerosis

Robert A. Koeth et al.

NATURE MEDICINE (2013)

Article Multidisciplinary Sciences

Archaea and Fungi of the Human Gut Microbiome: Correlations with Diet and Bacterial Residents

Christian Hoffmann et al.

PLOS ONE (2013)

Review Genetics & Heredity

The Human Microbiome: Our Second Genome

Elizabeth A. Grice et al.

ANNUAL REVIEW OF GENOMICS AND HUMAN GENETICS, VOL 13 (2012)

Article Biotechnology & Applied Microbiology

Methanoplasmatales, Thermoplasmatales-Related Archaea in Termite Guts and Other Environments, Are the Seventh Order of Methanogens

Kristina Paul et al.

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2012)

Article Microbiology

Methanomassiliicoccus luminyensis gen. nov., sp nov., a methanogenic archaeon isolated from human faeces

Bedis Dridi et al.

INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2012)

Article Multidisciplinary Sciences

Gut microbiota composition correlates with diet and health in the elderly

Marcus J. Claesson et al.

NATURE (2012)

Article Multidisciplinary Sciences

Structure, function and diversity of the healthy human microbiome

Curtis Huttenhower et al.

NATURE (2012)

Review Microbiology

Genomic insights into the marine sponge microbiome

Ute Hentschel et al.

NATURE REVIEWS MICROBIOLOGY (2012)

Article Biochemistry & Molecular Biology

IMG: the integrated microbial genomes database and comparative analysis system

Victor M. Markowitz et al.

NUCLEIC ACIDS RESEARCH (2012)

Article Multidisciplinary Sciences

Microbial conversion of choline to trimethylamine requires a glycyl radical enzyme

Smaranda Craciun et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2012)

Article Biochemical Research Methods

Ultra-fast sequence clustering from similarity networks with SiLiX

Vincent Miele et al.

BMC BIOINFORMATICS (2011)

Article Biochemistry & Molecular Biology

Fold and Function of the InlB B-repeat

Maria Ebbes et al.

JOURNAL OF BIOLOGICAL CHEMISTRY (2011)

Article Multidisciplinary Sciences

Gut flora metabolism of phosphatidylcholine promotes cardiovascular disease

Zeneng Wang et al.

NATURE (2011)

Article Multidisciplinary Sciences

Immunogenic Properties of Archaeal Species Found in Bioaerosols

Pascale Blais Lecours et al.

PLOS ONE (2011)

Article Multidisciplinary Sciences

Composition, variability, and temporal stability of the intestinal microbiota of the elderly

Marcus J. Claesson et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2011)

Article Multidisciplinary Sciences

Pan-genome of the dominant human gut-associated archaeon, Methanobrevibacter smithii, studied in twins

Elizabeth E. Hansen et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2011)

Article Biochemical Research Methods

Search and clustering orders of magnitude faster than BLAST

Robert C. Edgar

BIOINFORMATICS (2010)

Article Multidisciplinary Sciences

A human gut microbial gene catalogue established by metagenomic sequencing

Junjie Qin et al.

NATURE (2010)

Article Environmental Sciences

Molecular evaluation of the human gut methanogenic archaeal microbiota reveals an age-associated increase of the diversity

Agnes Mihajlovski et al.

ENVIRONMENTAL MICROBIOLOGY REPORTS (2010)

Article Gastroenterology & Hepatology

Low Counts of Faecalibacterium prausnitzii in Colitis Microbiota

H. Sokol et al.

INFLAMMATORY BOWEL DISEASES (2009)

Article Biotechnology & Applied Microbiology

Community-wide analysis of microbial genome sequence signatures

Gregory J. Dick et al.

GENOME BIOLOGY (2009)

Article Multidisciplinary Sciences

Genomic and metabolic adaptations of Methanobrevibacter smithii to the human gut

Buck S. Samuel et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2007)

Review Cell Biology

Sel1-like repeat proteins in signal transduction

Peer R. E. Mittl et al.

CELLULAR SIGNALLING (2007)

Article Multidisciplinary Sciences

Methanogenic Archaea and human periodontal disease

PW Lepp et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2004)