Related references
Note: Only part of the references are listed.Interactive tree of life (iTOL) v3: an online tool for the display and annotation of phylogenetic and other trees
Ivica Letunic et al.
NUCLEIC ACIDS RESEARCH (2016)
Robust high-throughput prokaryote de novo assembly and improvement pipeline for Illumina data
Andrew J. Page et al.
MICROBIAL GENOMICS (2016)
Roary: rapid large-scale prokaryote pan genome analysis
Andrew J. Page et al.
BIOINFORMATICS (2015)
Genomic analysis of diversity, population structure, virulence, and antimicrobial resistance in Klebsiella pneumoniae, an urgent threat to public health
Kathryn E. Holt et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2015)
ClonalFrameML: Efficient Inference of Recombination in Whole Bacterial Genomes
Xavier Didelot et al.
PLOS COMPUTATIONAL BIOLOGY (2015)
A Year of Infection in the Intensive Care Unit: Prospective Whole Genome Sequencing of Bacterial Clinical Isolates Reveals Cryptic Transmissions and Novel Microbiota
David J. Roach et al.
PLOS GENETICS (2015)
Rapid phylogenetic analysis of large samples of recombinant bacterial whole genome sequences using Gubbins
Nicholas J. Croucher et al.
NUCLEIC ACIDS RESEARCH (2015)
Draft Genome Sequences of Klebsiella oxytoca Isolates Originating from a Highly Contaminated Liquid Hand Soap Product
J. A. Hammerl et al.
GENOME ANNOUNCEMENTS (2015)
Prokka: rapid prokaryotic genome annotation
Torsten Seemann
BIOINFORMATICS (2014)
SRST2: Rapid genomic surveillance for public health and hospital microbiology labs
Michael Inouye et al.
GENOME MEDICINE (2014)
Genomic Definition of Hypervirulent and Multidrug-Resistant Klebsiella pneumoniae Clonal Groups
Suzanne Bialek-Davenet et al.
EMERGING INFECTIOUS DISEASES (2014)
The genetic causes of convergent evolution
David L. Stern
NATURE REVIEWS GENETICS (2013)
Genome Sequence of Klebsiella oxytoca M5al, a Promising Strain for Nitrogen Fixation and Chemical Production
Guanhui Bao et al.
GENOME ANNOUNCEMENTS (2013)
Genome Sequence of Klebsiella oxytoca SA2, an Endophytic Nitrogen-Fixing Bacterium Isolated from the Pioneer Grass Psammochloa villosa
Mingyue Chen et al.
GENOME ANNOUNCEMENTS (2013)
Influence of Blocking of 2,3-Butanediol Pathway on Glycerol Metabolism for 1,3-Propanediol Production by Klebsiella oxytoca
Gang Zhang et al.
APPLIED BIOCHEMISTRY AND BIOTECHNOLOGY (2012)
Complete Genome Sequence of Klebsiella oxytoca KCTC 1686, Used in Production of 2,3-Butanediol
Sang Heum Shin et al.
JOURNAL OF BACTERIOLOGY (2012)
Complete Genome Sequence of Klebsiella oxytoca E718, a New Delhi Metallo-β-Lactamase-1-Producing Nosocomial Strain
Tsai-Lien Liao et al.
JOURNAL OF BACTERIOLOGY (2012)
Dendroscope 3: An Interactive Tool for Rooted Phylogenetic Trees and Networks
Daniel H. Huson et al.
SYSTEMATIC BIOLOGY (2012)
Outbreak of Extended-Spectrum β-Lactamase-producing Klebsiella oxytoca Infections Associated with Contaminated Handwashing Sinks
Christopher Lowe et al.
EMERGING INFECTIOUS DISEASES (2012)
Transmission of Extended-Spectrum β-Lactamase Klebsiella oxytoca via the Breathing Circuit of a Transport Ventilator: Root Cause Analysis and Infection Control Recommendations
S. Schulz-Stuebner et al.
INFECTION CONTROL AND HOSPITAL EPIDEMIOLOGY (2011)
Origins of bacterial diversity through horizontal genetic transfer and adaptation to new ecological niches
Jane Wiedenbeck et al.
FEMS MICROBIOLOGY REVIEWS (2011)
FastTree 2-Approximately Maximum-Likelihood Trees for Large Alignments
Morgan N. Price et al.
PLOS ONE (2010)
Evolution of MRSA During Hospital Transmission and Intercontinental Spread
Simon R. Harris et al.
SCIENCE (2010)
The Sequence Alignment/Map format and SAMtools
Heng Li et al.
BIOINFORMATICS (2009)
Velvet: Algorithms for de novo short read assembly using de Bruijn graphs
Daniel R. Zerbino et al.
GENOME RESEARCH (2008)
Outbreak of OXY-2-producing Klebsiella oxytoca in a renal transplant unit
Mariela Soledad Zarate et al.
JOURNAL OF CLINICAL MICROBIOLOGY (2008)
Recombination speeds adaptation by reducing competition between beneficial mutations in populations of Escherichia coli
Tim F. Cooper
PLOS BIOLOGY (2007)
Yersiniabactin is a virulence factor for Klebsiella pneumoniae during pulmonary infection
Matthew S. Lawlor et al.
INFECTION AND IMMUNITY (2007)
Extended-spectrum β-lactamases:: a clinical update
DL Paterson et al.
CLINICAL MICROBIOLOGY REVIEWS (2005)
Six groups of the OXY β-lactamase evolved over millions of years in Klebsiella oxytoca
C Fevre et al.
ANTIMICROBIAL AGENTS AND CHEMOTHERAPY (2005)
A mutation in Escherichia coli DNA gyrase conferring quinolone resistance results in sensitivity to drugs targeting eukaryotic topoisomerase II
T Gruger et al.
ANTIMICROBIAL AGENTS AND CHEMOTHERAPY (2004)
Isolation of a chromosomal region of Klebsiella pneumoniae associated with allantoin metabolism and liver infection
HC Chou et al.
INFECTION AND IMMUNITY (2004)
Outbreak of multi-resistant Klebsiella oxytoca involving strains with extended-spectrum β-lactamases and strains with extended-spectrum activity of the chromosomal β-lactamase
D Decré et al.
JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY (2004)
Bacteria engineered for fuel ethanol production: current status
BS Dien et al.
APPLIED MICROBIOLOGY AND BIOTECHNOLOGY (2003)
Klebsiella pneumoniae MrkD-mediated biofilm formation on extracellular matrix- and collagencoated surfaces
J Jagnow et al.
MICROBIOLOGY-SGM (2003)
Comparison of BSAC agar dilution and NCCLS broth microdilution MIC methods for in vitro susceptibility testing of Streptococcus pneumoniae, Haemophilus influenzae and Moraxella catarrhalis: the BSAC Respiratory Resistance Surveillance Programme
R Reynolds et al.
JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY (2003)
Determination of minimum inhibitory concentrations
JM Andrews
JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY (2001)
Phylogenetic diversity of Klebsiella pneumoniae and Klebsiella oxytoca clinical isolates revealed by randomly amplified polymorphic DNA, gyrA and parC genes sequencing and automated ribotyping
S Brisse et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2001)
Epidemiology of quinolone resistance of Klebsiella pneumoniae and Klebsiella oxytoca in Europe
S Brisse et al.
EUROPEAN JOURNAL OF CLINICAL MICROBIOLOGY & INFECTIOUS DISEASES (2000)