Related references
Note: Only part of the references are listed.ELM 2016-data update and new functionality of the eukaryotic linear motif resource
Holger Dinkel et al.
NUCLEIC ACIDS RESEARCH (2016)
Proteomic peptide phage display uncovers novel interactions of the PDZ1-2 supramodule of syntenin
Sarah Garrido-Urbani et al.
FEBS LETTERS (2016)
The BioPlex Network: A Systematic Exploration of the Human Interactome
Edward L. Huttlin et al.
CELL (2015)
High-throughput methods for identification of protein-protein interactions involving short linear motifs
Cecilia Blikstad et al.
CELL COMMUNICATION AND SIGNALING (2015)
Experimental detection of short regulatory motifs in eukaryotic proteins: tips for good practice as well as for bad
Toby J. Gibson et al.
CELL COMMUNICATION AND SIGNALING (2015)
Motif co-regulation and co-operativity are common mechanisms in transcriptional, post-transcriptional and post-translational regulation
Kim Van Roey et al.
CELL COMMUNICATION AND SIGNALING (2015)
Short linear motifs - ex nihilo evolution of protein regulation
Norman E. Davey et al.
CELL COMMUNICATION AND SIGNALING (2015)
Convergent evolution and mimicry of protein linear motifs in host-pathogen interactions
Lucia Beatriz Chemes et al.
CURRENT OPINION IN STRUCTURAL BIOLOGY (2015)
How pathogens use linear motifs to perturb host cell networks
Allegra Via et al.
TRENDS IN BIOCHEMICAL SCIENCES (2015)
A Proteome-Scale Map of the Human Interactome Network
Thomas Rolland et al.
CELL (2014)
Short Linear Motifs: Ubiquitous and Functionally Diverse Protein Interaction Modules Directing Cell Regulation
Kim Van Roey et al.
CHEMICAL REVIEWS (2014)
Proteome-wide analysis of human disease mutations in short linear motifs: neglected players in cancer?
Bora Uyar et al.
MOLECULAR BIOSYSTEMS (2014)
The Calcineurin Signaling Network Evolves via Conserved Kinase-Phosphatase Modules that Transcend Substrate Identity
Aaron Goldman et al.
MOLECULAR CELL (2014)
A Million Peptide Motifs for the Molecular Biologist
Peter Tompa et al.
MOLECULAR CELL (2014)
Large-scale interaction profiling of PDZ domains through proteomic peptide-phage display using human and viral phage peptidomes
Ylva Ivarsson et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2014)
Interaction Analysis through Proteomic Phage Display
Gustav N. Sundell et al.
BIOMED RESEARCH INTERNATIONAL (2014)
The CRAPome: a contaminant repository for affinity purification-mass spectrometry data
Dattatreya Mellacheruvu et al.
NATURE METHODS (2013)
Phospho-Ser/Thr-binding domains: navigating the cell cycle and DNA damage response
H. Christian Reinhardt et al.
NATURE REVIEWS MOLECULAR CELL BIOLOGY (2013)
Motif switches: decision-making in cell regulation
Kim Van Roey et al.
CURRENT OPINION IN STRUCTURAL BIOLOGY (2012)
Plasticity of PDZ domains in ligand recognition and signaling
Ylva Ivarsson
FEBS LETTERS (2012)
Attributes of short linear motifs
Norman E. Davey et al.
MOLECULAR BIOSYSTEMS (2012)
ELM-the database of eukaryotic linear motifs
Holger Dinkel et al.
NUCLEIC ACIDS RESEARCH (2012)
HIPPIE: Integrating Protein Interaction Networks with Experiment Based Quality Scores
Martin H. Schaefer et al.
PLOS ONE (2012)
The structural flexibility of the shank1 PDZ domain is important for its binding to different ligands
Jun Hyuck Lee et al.
BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS (2011)
Phage display can select over-hydrophobic sequences that may impair prediction of natural domain-peptide interactions
Katja Luck et al.
BIOINFORMATICS (2011)
Autoantigen discovery with a synthetic human peptidome
H. Benjamin Larman et al.
NATURE BIOTECHNOLOGY (2011)
OpenFreezer: a reagent information management software system
Marina Olhovsky et al.
NATURE METHODS (2011)
How viruses hijack cell regulation
Norman E. Davey et al.
TRENDS IN BIOCHEMICAL SCIENCES (2011)
Binary classification of protein molecules into intrinsically disordered and ordered segments
Satoshi Fukuchi et al.
BMC STRUCTURAL BIOLOGY (2011)
Cytoscape Web: an interactive web-based network browser
Christian T. Lopes et al.
BIOINFORMATICS (2010)
GOrilla: a tool for discovery and visualization of enriched GO terms in ranked gene lists
Eran Eden et al.
BMC BIOINFORMATICS (2009)
Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources
Da Wei Huang et al.
NATURE PROTOCOLS (2009)
Cell Signaling in Space and Time: Where Proteins Come Together and When They're Apart
John D. Scott et al.
SCIENCE (2009)
Ultrafast and memory-efficient alignment of short DNA sequences to the human genome
Ben Langmead et al.
GENOME BIOLOGY (2009)
Function and structure of inherently disordered proteins
A. Keith Dunker et al.
CURRENT OPINION IN STRUCTURAL BIOLOGY (2008)
A specificity map for the PDZ domain family
Raffi Tonikian et al.
PLOS BIOLOGY (2008)
SLiMFinder: A Probabilistic Method for Identifying Over-Represented, Convergently Evolved, Short Linear Motifs in Proteins
Richard J. Edwards et al.
PLOS ONE (2007)
GYF domain proteomics reveals interaction sites in known and novel target proteins
M Kofler et al.
MOLECULAR & CELLULAR PROTEOMICS (2005)
The LxxLL motif: a multifunctional binding sequence in transcriptional regulation
MJ Plevin et al.
TRENDS IN BIOCHEMICAL SCIENCES (2005)
The GGA proteins: Adaptors on the move
JS Bonifacino
NATURE REVIEWS MOLECULAR CELL BIOLOGY (2004)
Direct interaction of GluRδ2 with Shank scaffold proteins in cerebellar Purkinje cells
T Uemura et al.
MOLECULAR AND CELLULAR NEUROSCIENCE (2004)
Insights into the phosphoregulation of β-secretase sorting signal by the VHS domain of GGA1
T Shiba et al.
TRAFFIC (2004)
Palladin is a novel binding partner for Ena/VASP family members
M Boukhelifa et al.
CELL MOTILITY AND THE CYTOSKELETON (2004)
Assembly of cell regulatory systems through protein interaction domains
T Pawson et al.
SCIENCE (2003)
Morphology and dynamics of clathrin/GGA1-coated carriers budding from the trans-Golgi network
R Puertollano et al.
MOLECULAR BIOLOGY OF THE CELL (2003)
Structural basis for recognition of acidic-cluster dileucine sequence by GGA1
T Shiba et al.
NATURE (2002)
EVH 1 domains: structure, function and interactions
LJ Ball et al.
FEBS LETTERS (2002)
The sorLA cytoplasmic domain interacts with GGA1 and-2 and defines minimum requirements for GGA binding
L Jacobsen et al.
FEBS LETTERS (2002)
Phosphotyrosine-binding domains in signal transduction
MB Yaffe
NATURE REVIEWS MOLECULAR CELL BIOLOGY (2002)
Core LXXLL motif sequences in CREB-binding protein, SRC1, and RIP140 define affinity and selectivity for steroid and retinoid receptors
DM Heery et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2001)
Phage display in pharmaceutical biotechnology
SS Sidhu
CURRENT OPINION IN BIOTECHNOLOGY (2000)