Related references
Note: Only part of the references are listed.STEM CELLS AND THE DIFFERENTIATION HIERARCHY IN MAMMARY GLAND DEVELOPMENT
Nai Yang Fu et al.
PHYSIOLOGICAL REVIEWS (2020)
Chromatin interaction analyses elucidate the roles of PRC2-bound silencers in mouse development
Chew Yee Ngan et al.
NATURE GENETICS (2020)
Candidate silencer elements for the human and mouse genomes
Naresh Doni Jayavelu et al.
NATURE COMMUNICATIONS (2020)
Integrated Single-Cell Transcriptomics and Chromatin Accessibility Analysis Reveals Regulators of Mammary Epithelial Cell Identity
Nicholas Pervolarakis et al.
CELL REPORTS (2020)
Aging-Associated Alterations in Mammary Epithelia and Stroma Revealed by Single-Cell RNA Sequencing
Carman Man-Chung Li et al.
CELL REPORTS (2020)
The R package Rsubread is easier, faster, cheaper and better for alignment and quantification of RNA sequencing reads
Yang Liao et al.
NUCLEIC ACIDS RESEARCH (2019)
Comprehensive Integration of Single-Cell Data
Tim Stuart et al.
CELL (2019)
Morphogenesis of extra-embryonic tissues directs the remodelling of the mouse embryo at implantation
Neophytos Christodoulou et al.
NATURE COMMUNICATIONS (2019)
Single-Cell Chromatin Analysis of Mammary Gland Development Reveals Cell-State Transcriptional Regulators and Lineage Relationships
Chi-Yeh Chung et al.
CELL REPORTS (2019)
Single-cell RNA-sequencing analysis of estrogen-and endocrine-disrupting chemical-induced reorganization of mouse mammary gland
Noriko Kanaya et al.
COMMUNICATIONS BIOLOGY (2019)
Single-cell landscape in mammary epithelium reveals bipotent-like cells associated with breast cancer risk and outcome
Weiyan Chen et al.
COMMUNICATIONS BIOLOGY (2019)
Mapping the Mouse Cell Atlas by Microwell-Seq
Xiaoping Han et al.
CELL (2018)
Integrating single-cell transcriptomic data across different conditions, technologies, and species
Andrew Butler et al.
NATURE BIOTECHNOLOGY (2018)
Clonal analysis of Notch1-expressing cells reveals the existence of unipotent stem cells that retain long-term plasticity in the embryonic mammary gland
Anna M. Lilja et al.
NATURE CELL BIOLOGY (2018)
Early lineage segregation of multipotent embryonic mammary gland progenitors
Aline Wuidart et al.
NATURE CELL BIOLOGY (2018)
Profiling human breast epithelial cells using single cell RNA sequencing identifies cell diversity
Quy H. Nguyen et al.
NATURE COMMUNICATIONS (2018)
Epigenetic and Transcriptomic Profiling of Mammary Gland Development and Tumor Models Disclose Regulators of Cell State Plasticity
Christopher Dravis et al.
CANCER CELL (2018)
Single-Cell Transcriptomes Distinguish Stem Cell State Changes and Lineage Specification Programs in Early Mammary Gland Development
Rajshekhar R. Giraddi et al.
CELL REPORTS (2018)
Foxp1 Is Indispensable for Ductal Morphogenesis and Controls the Exit of Mammary Stem Cells from Quiescence
Nai Yang Fu et al.
DEVELOPMENTAL CELL (2018)
Identity and dynamics of mammary stem cells during branching morphogenesis
Colinda L. G. J. Scheele et al.
NATURE (2017)
Identification of quiescent and spatially restricted mammary stem cells that are hormone responsive
Nai Yang Fu et al.
NATURE CELL BIOLOGY (2017)
Construction of developmental lineage relationships in the mouse mammary gland by single-cell RNA profiling
Bhupinder Pal et al.
NATURE COMMUNICATIONS (2017)
Differentiation dynamics of mammary epithelial cells revealed by single-cell RNA sequencing
Karsten Bach et al.
NATURE COMMUNICATIONS (2017)
Long-lived unipotent Blimp1-positive luminal stem cells drive mammary gland organogenesis throughout adult life
Salah Elias et al.
NATURE COMMUNICATIONS (2017)
De Novo Prediction of Stem Cell Identity using Single-Cell Transcriptome Data
Dominic Grun et al.
CELL STEM CELL (2016)
Single-cell analysis of mixed-lineage states leading to a binary cell fate choice
Andre Olsson et al.
NATURE (2016)
Single-Cell Transcript Profiles Reveal Multilineage Priming in Early Progenitors Derived from Lgr5+ Intestinal Stem Cells
Tae-Hee Kim et al.
CELL REPORTS (2016)
A pooled shRNA screen for regulators of primary mammary stem and progenitor cells identifies roles for Asap1 and Prox1
Julie M. Sheridan et al.
BMC CANCER (2015)
voom: precision weights unlock linear model analysis tools for RNA-seq read counts
Charity W. Law et al.
GENOME BIOLOGY (2014)
Mapping Cellular Hierarchy by Single-Cell Analysis of the Cell Surface Repertoire
Guoji Guo et al.
CELL STEM CELL (2013)
Lgr5-Expressing Cells Are Sufficient and Necessary for Postnatal Mammary Gland Organogenesis
Vicki Plaks et al.
CELL REPORTS (2013)
Fast gapped-read alignment with Bowtie 2
Ben Langmead et al.
NATURE METHODS (2012)
Differential expression analysis of multifactor RNA-Seq experiments with respect to biological variation
Davis J. McCarthy et al.
NUCLEIC ACIDS RESEARCH (2012)
c-Kit is required for growth and survival of the cells of origin of Brca1-mutation-associated breast cancer
J. L. Regan et al.
ONCOGENE (2012)
Mammary gland development
Hector Macias et al.
WILEY INTERDISCIPLINARY REVIEWS-DEVELOPMENTAL BIOLOGY (2012)
Remodeling mechanisms of the mammary gland during involution
Christine J. Watson et al.
INTERNATIONAL JOURNAL OF DEVELOPMENTAL BIOLOGY (2011)
BEDTools: a flexible suite of utilities for comparing genomic features
Aaron R. Quinlan et al.
BIOINFORMATICS (2010)
Phenotypic and molecular characterization of the claudin-low intrinsic subtype of breast cancer
Aleix Prat et al.
BREAST CANCER RESEARCH (2010)
Transcriptome analyses of mouse and human mammary cell subpopulations reveal multiple conserved genes and pathways
Elgene Lim et al.
BREAST CANCER RESEARCH (2010)
Testing significance relative to a fold-change threshold is a TREAT
Davis J. McCarthy et al.
BIOINFORMATICS (2009)
Model-based Analysis of ChIP-Seq (MACS)
Yong Zhang et al.
GENOME BIOLOGY (2008)
Moderated statistical tests for assessing differences in tag abundance
Mark D. Robinson et al.
BIOINFORMATICS (2007)
Identification of stem cells in small intestine and colon by marker gene Lgr5
Nick Barker et al.
NATURE (2007)
Generation of a functional mammary gland from a single stem cell
M Shackleton et al.
NATURE (2006)