Related references
Note: Only part of the references are listed.Micropollutant biotransformation and bioaccumulation in natural stream biofilms
Werner L. Desiante et al.
WATER RESEARCH (2021)
Mass-Transfer-Limited Biodegradation at Low Concentrations.Evidence from Reactive Transport Modeling of Isotope Profiles in a Bench-Scale Aquifer
Fengchao Sun et al.
ENVIRONMENTAL SCIENCE & TECHNOLOGY (2021)
Machine learning-based prediction of enzyme substrate scope: Application to bacterial nitrilases
Zhongyu Mou et al.
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS (2021)
NanoSIMS: Microscale Quantification of Biogeochemical Activity with Large-Scale Impacts
Xavier Mayali
ANNUAL REVIEW OF MARINE SCIENCE, VOL 12 (2020)
Cyanuric Acid Biodegradation via Biuret: Physiology, Taxonomy, and Geospatial Distribution
Kelly G. Aukema et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2020)
Discovering the Microbial Enzymes Driving Drug Toxicity with Activity-Based Protein Profiling
Parth B. Jariwala et al.
ACS CHEMICAL BIOLOGY (2020)
Relating Metatranscriptomic Profiles to the Micropollutant Biotransformation Potential of Complex Microbial Communities
Stefan Achermann et al.
ENVIRONMENTAL SCIENCE & TECHNOLOGY (2020)
Comparison of Small Molecule Biotransformation Half-Lives between Activated Sludge and Soil: Opportunities for Read-Across?
Kathrin Fenner et al.
ENVIRONMENTAL SCIENCE & TECHNOLOGY (2020)
Next-generation physiology approaches to study microbiome function at single cell level
Roland Hatzenpichler et al.
NATURE REVIEWS MICROBIOLOGY (2020)
Microbial responses to perfluoroalkyl substances and perfluorooctanesulfonate (PFOS) desulfurization in the Antarctic marine environment
Elena Cerro-Galvez et al.
WATER RESEARCH (2020)
The long journey towards standards for engineering biosystems Are the Molecular Biology and the Biotech communities ready to standardise?
Jacob Beal et al.
EMBO REPORTS (2020)
An engineered PET depolymerase to break down and recycle plastic bottles
V. Tournier et al.
NATURE (2020)
Phenotypic heterogeneity as key factor for growth and survival under oligotrophic conditions
Kankana Kundu et al.
ENVIRONMENTAL MICROBIOLOGY (2020)
Understanding the Dependence of Micropollutant Biotransformation Rates on Short-Term Temperature Shifts
Paola Meynet et al.
ENVIRONMENTAL SCIENCE & TECHNOLOGY (2020)
Global analysis of adenylate-forming enzymes reveals β-lactone biosynthesis pathway in pathogenic Nocardia
Serina L. Robinson et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2020)
The key active degrader, metabolic pathway and microbial ecology of triclosan biodegradation in an anoxic/oxic system
Huihui Dai et al.
BIORESOURCE TECHNOLOGY (2020)
Machine learning-based prediction of activity and substrate specificity for OleA enzymes in the thiolase superfamily
Serina L. Robinson et al.
SYNTHETIC BIOLOGY (2020)
Microbial genetic potential for xenobiotic metabolism increases with depth during biofiltration
Dong Li et al.
ENVIRONMENTAL SCIENCE-PROCESSES & IMPACTS (2020)
Exposure to modern, widespread environmental endocrine disrupting chemicals and their effect on the reproductive potential of women: an overview of current epidemiological evidence
Anetta Karwacka et al.
HUMAN FERTILITY (2019)
Biodegradation of Chemicals in Unspiked Surface Waters Downstream of Wastewater Treatment Plants
Zhe Li et al.
ENVIRONMENTAL SCIENCE & TECHNOLOGY (2019)
Oxygen Half-Saturation Constants for Pharmaceuticals in Activated Sludge and Microbial Community Activity under Varied Oxygen Levels
Lauren B. Stadler et al.
ENVIRONMENTAL SCIENCE & TECHNOLOGY (2019)
Mechanistic Dichotomy in Bacterial Trichloroethene Dechlorination Revealed by Carbon and Chlorine Isotope Effects
Christina Lihl et al.
ENVIRONMENTAL SCIENCE & TECHNOLOGY (2019)
Enzyme annotation for orphan and novel reactions using knowledge of substrate reactive sites
Noushin Hadadi et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2019)
An automated Raman-based platform for the sorting of live cells by functional properties
Kang Soo Lee et al.
NATURE MICROBIOLOGY (2019)
Identification of dominant sulfamethoxazole-degraders in pig farm-impacted soil by DNA and protein stable isotope probing
Wei-Ying Ouyang et al.
ENVIRONMENT INTERNATIONAL (2019)
Defining lower limits of biodegradation: atrazine degradation regulated by mass transfer and maintenance demand in Arthrobacter aurescens TC1
Kankana Kundu et al.
ISME JOURNAL (2019)
Biodegradation of the Neonicotinoid Insecticide Acetamiprid by Actinomycetes Streptomyces canus CGMCC 13662 and Characterization of the Novel Nitrile Hydratase Involved
Ling Guo et al.
JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY (2019)
Biotransformation of organic micropollutants by anaerobic sludge enzymes
Lorena Gonzalez-Gil et al.
WATER RESEARCH (2019)
Biotransformation of antibiotics: Exploring the activity of extracellular and intracellular enzymes derived from wastewater microbial communities
Michael T. Zumstein et al.
WATER RESEARCH (2019)
Global diversity and biogeography of bacterial communities in wastewater treatment plants
Linwei Wu et al.
NATURE MICROBIOLOGY (2019)
Metaproteomics: Much More than Measuring Gene Expression in Microbial Communities
Manuel Kleiner
MSYSTEMS (2019)
Implications of microbial adaptation for the assessment of environmental persistence of chemicals
Baptiste A. J. Poursat et al.
CRITICAL REVIEWS IN ENVIRONMENTAL SCIENCE AND TECHNOLOGY (2019)
Mapping human microbiome drug metabolism by gut bacteria and their genes
Michael Zimmermann et al.
NATURE (2019)
Petroleum Hydrocarbon Contamination in Terrestrial Ecosystems-Fate and Microbial Responses
Adam Truskewycz et al.
MOLECULES (2019)
Spatial ecology of a wastewater network defines the antibiotic resistance genes in downstream receiving waters
Marcos Quintela-Baluja et al.
WATER RESEARCH (2019)
Rate-Limiting Mass Transfer in Micropollutant Degradation Revealed by Isotope Fractionation in Chemostat
Benno N. Ehrl et al.
ENVIRONMENTAL SCIENCE & TECHNOLOGY (2019)
PMBD: a Comprehensive Plastics Microbial Biodegradation Database
Zhiqiang Gan et al.
DATABASE-THE JOURNAL OF BIOLOGICAL DATABASES AND CURATION (2019)
Solid-phase extraction method for stable isotope analysis of pesticides from large volume environmental water samples
Clara Torrento et al.
ANALYST (2019)
Establishing sequential managed aquifer recharge technology (SMART) for enhanced removal of trace organic chemicals: Experiences from field studies in Berlin, Germany
Karin Hellauer et al.
JOURNAL OF HYDROLOGY (2018)
Current understanding of the human microbiome
Jack A. Gilbert et al.
NATURE MEDICINE (2018)
Transformation, CO2 formation and uptake of four organic micropollutants by carrier-attached microorganisms
Per Falas et al.
WATER RESEARCH (2018)
Prediction of enzymatic pathways by integrative pathway mapping
Sara Calhoun et al.
ELIFE (2018)
Quantitative structure-activity relationships for primary aerobic biodegradation of organic chemicals in pristine surface waters: starting points for predicting biodegradation under acclimatization
Tom M. Nolte et al.
ENVIRONMENTAL SCIENCE-PROCESSES & IMPACTS (2018)
Identification of Bisphenol A-Assimilating Microorganisms in Mixed Microbial Communities Using 13C-DNA Stable Isotope Probing
Sandeep Sathyamoorthy et al.
ENVIRONMENTAL SCIENCE & TECHNOLOGY (2018)
Trends in Micropollutant Biotransformation along a Solids Retention Time Gradient
Stefan Achermann et al.
ENVIRONMENTAL SCIENCE & TECHNOLOGY (2018)
Structure and function of the global topsoil microbiome
Mohammad Bahram et al.
NATURE (2018)
Screening and Characterization of Novel Polyesterases from Environmental Metagenomes with High Hydrolytic Activity against Synthetic Polyesters
Mahbod Hajighasemi et al.
ENVIRONMENTAL SCIENCE & TECHNOLOGY (2018)
Expanding biological applications using cell-free metabolic engineering: An overview
James R. Swartz
METABOLIC ENGINEERING (2018)
Transcriptome-Stable Isotope Probing Provides Targeted Functional and Taxonomic Insights Into Microaerobic Pollutant-Degrading Aquifer Microbiota
Lauren M. Bradford et al.
FRONTIERS IN MICROBIOLOGY (2018)
Subsurface landfill leachate contamination affects microbial metabolic potential and gene expression in the Banisveld aquifer
Neslihan Tas et al.
FEMS MICROBIOLOGY ECOLOGY (2018)
In Silico Identification of Bioremediation Potential: Carbamazepine and Other Recalcitrant Personal Care Products
Kelly G. Aukema et al.
ENVIRONMENTAL SCIENCE & TECHNOLOGY (2017)
Using Benchmarking To Strengthen the Assessment of Persistence
Michael S. McLachlan et al.
ENVIRONMENTAL SCIENCE & TECHNOLOGY (2017)
Critical decisions in metaproteomics: achieving high confidence protein annotations in a sea of unknowns
Emma Timmins-Schiffman et al.
ISME JOURNAL (2017)
High-Throughput Analysis of Enzymatic Hydrolysis of Biodegradable Polyesters by Monitoring Cohydrolysis of a Polyester-Embedded Fluorogenic Probe
Michael Thomas Zumstein et al.
ENVIRONMENTAL SCIENCE & TECHNOLOGY (2017)
Biocarriers Improve Bioaugmentation Efficiency of a Rapid Sand Filter for the Treatment of 2,6-Dichlorobenzamide-Contaminated Drinking Water
Benjamin Horemans et al.
ENVIRONMENTAL SCIENCE & TECHNOLOGY (2017)
Nontarget Screening with High Resolution Mass Spectrometry in the Environment: Ready to Go?
Juliane Hollender et al.
ENVIRONMENTAL SCIENCE & TECHNOLOGY (2017)
Synthetic chemicals as agents of global change
Emily S. Bernhardt et al.
FRONTIERS IN ECOLOGY AND THE ENVIRONMENT (2017)
Simulation of the Bottleneck Controlling Access into a Rieske Active Site: Predicting Substrates of Naphthalene 1,2-Dioxygenase
Diego E. Escalante et al.
JOURNAL OF CHEMICAL INFORMATION AND MODELING (2017)
Relative contribution of ammonia oxidizing bacteria and other members of nitrifying activated sludge communities to micropollutant biotransformation
Yujie Men et al.
WATER RESEARCH (2017)
Diffusion and sorption of organic micropollutants in biofilms with varying thicknesses
Elena Torresi et al.
WATER RESEARCH (2017)
Groundwater contamination with 2,6-dichlorobenzamide (BAM) and perspectives for its microbial removal
Lea Ellegaard-Jensen et al.
APPLIED MICROBIOLOGY AND BIOTECHNOLOGY (2017)
The ecology of anaerobic degraders of BTEX hydrocarbons in aquifers
Tillmann Lueders
FEMS MICROBIOLOGY ECOLOGY (2017)
The corrinoid cofactor of reductive dehalogenases affects dechlorination rates and extents in organohalide-respiring Dehalococcoides mccartyi
Jun Yan et al.
ISME JOURNAL (2016)
enviPath - The environmental contaminant biotransformation pathway resource
Joerg Wickert et al.
NUCLEIC ACIDS RESEARCH (2016)
Contaminant-Degrading Microorganisms Identified Using Stable Isotope Probing
Alison M. Cupples
CHEMICAL ENGINEERING & TECHNOLOGY (2016)
Introducing sequential managed aquifer recharge technology (SMART) - From laboratory to full-scale application
Julia Regnery et al.
CHEMOSPHERE (2016)
Application of stable isotope tools for evaluating natural and stimulated biodegradation of organic pollutants in field studies
Anko Fischer et al.
CURRENT OPINION IN BIOTECHNOLOGY (2016)
rRNA Gene Expression of Abundant and Rare Activated-Sludge Microorganisms and Growth Rate Induced Micropollutant Removal
David C. Vuono et al.
ENVIRONMENTAL SCIENCE & TECHNOLOGY (2016)
Functional Gene Markers for Fumarate-Adding and Dearomatizing Key Enzymes in Anaerobic Aromatic Hydrocarbon Degradation in Terrestrial Environments
Frederick von Netzer et al.
JOURNAL OF MOLECULAR MICROBIOLOGY AND BIOTECHNOLOGY (2016)
Biofilms: an emergent form of bacterial life
Hans-Curt Flemming et al.
NATURE REVIEWS MICROBIOLOGY (2016)
Micropollutant degradation via extracted native enzymes from activated sludge
Daniel Krah et al.
WATER RESEARCH (2016)
Prioritizing Unknown Transformation Products from Biologically-Treated Wastewater Using High-Resolution Mass Spectrometry, Multivariate Statistics, and Metabolic Logic
Jennifer E. Schollee et al.
ANALYTICAL CHEMISTRY (2015)
Metagenomics for the discovery of pollutant degrading enzymes
Lisa Ufarte et al.
BIOTECHNOLOGY ADVANCES (2015)
Exploring the planetary boundary for chemical pollution
Miriam L. Diamond et al.
ENVIRONMENT INTERNATIONAL (2015)
Beyond User Acceptance: A Legitimacy Framework for Potable Water Reuse in California
Sasha R. Harris-Lovett et al.
ENVIRONMENTAL SCIENCE & TECHNOLOGY (2015)
Biodegradation: Updating the Concepts of Control for Microbial Cleanup in Contaminated Aquifers
Rainer U. Meckenstock et al.
ENVIRONMENTAL SCIENCE & TECHNOLOGY (2015)
Structure and function of the global ocean microbiome
Shinichi Sunagawa et al.
SCIENCE (2015)
Degradation of trace concentrations of the persistent groundwater pollutant 2,6-dichlorobenzamide (BAM) in bioaugmented rapid sand filters
Christian Nyrop Albers et al.
WATER RESEARCH (2015)
Can meta-omics help to establish causality between contaminant biotransformations and genes or gene products?
David R. Johnson et al.
ENVIRONMENTAL SCIENCE-WATER RESEARCH & TECHNOLOGY (2015)
Exploring methane-oxidizing communities for the co-metabolic degradation of organic micropollutants
Jessica Benner et al.
APPLIED MICROBIOLOGY AND BIOTECHNOLOGY (2015)
Water Analysis: Emerging Contaminants and Current Issues
Susan D. Richardson et al.
ANALYTICAL CHEMISTRY (2014)
Role of primary substrate composition on microbial community structure and function and trace organic chemical attenuation in managed aquifer recharge systems
Dong Li et al.
APPLIED MICROBIOLOGY AND BIOTECHNOLOGY (2014)
Identifying Small Molecules via High Resolution Mass Spectrometry: Communicating Confidence
Emma L. Schymanski et al.
ENVIRONMENTAL SCIENCE & TECHNOLOGY (2014)
EC-BLAST: a tool to automatically search and compare enzyme reactions
Syed Asad Rahman et al.
NATURE METHODS (2014)
Functional Characterization of Reductive Dehalogenases by Using Blue Native Polyacrylamide Gel Electrophoresis
Shuiquan Tang et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2013)
Discovery of new enzymes and metabolic pathways by using structure and genome context
Suwen Zhao et al.
NATURE (2013)
Overview of organohalide-respiring bacteria and a proposal for a classification system for reductive dehalogenases
Laura A. Hug et al.
PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2013)
Pesticides reduce regional biodiversity of stream invertebrates
Mikhail A. Beketov et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2013)
Evaluating Pesticide Degradation in the Environment: Blind Spots and Emerging Opportunities
Kathrin Fenner et al.
SCIENCE (2013)
Is biological treatment a viable alternative for micropollutant removal in drinking water treatment processes?
Jessica Benner et al.
WATER RESEARCH (2013)
Current challenges in compound-specific stable isotope analysis of environmental organic contaminants
Martin Elsner et al.
ANALYTICAL AND BIOANALYTICAL CHEMISTRY (2012)
Comparative metagenomics of three Dehalococcoides-containing enrichment cultures: the role of the non-dechlorinating community
Laura A. Hug et al.
BMC GENOMICS (2012)
The Shared Antibiotic Resistome of Soil Bacteria and Human Pathogens
Kevin J. Forsberg et al.
SCIENCE (2012)
Measurement of mRNA abundance using RNA-seq data: RPKM measure is inconsistent among samples
Gunter P. Wagner et al.
THEORY IN BIOSCIENCES (2012)
The University of Minnesota Pathway Prediction System: multi-level prediction and visualization
Junfeng Gao et al.
NUCLEIC ACIDS RESEARCH (2011)
Simulation of chemical metabolism for fate and hazard assessment. II CATALOGIC simulation of abiotic and microbial degradation
S. Dimitrov et al.
SAR AND QSAR IN ENVIRONMENTAL RESEARCH (2011)
High-Throughput Identification of Microbial Transformation Products of Organic Micropollutants
Damian E. Helbling et al.
ENVIRONMENTAL SCIENCE & TECHNOLOGY (2010)
Stable isotope fractionation to investigate natural transformation mechanisms of organic contaminants: principles, prospects and limitations
Martin Elsner
JOURNAL OF ENVIRONMENTAL MONITORING (2010)
The University of Minnesota Biocatalysis/Biodegradation Database: improving public access
Junfeng Gao et al.
NUCLEIC ACIDS RESEARCH (2010)
E-zyme: predicting potential EC numbers from the chemical transformation pattern of substrate-product pairs
Yoshihiro Yamanishi et al.
BIOINFORMATICS (2009)
Computational Framework for Predictive Biodegradation
Stacey D. Finley et al.
BIOTECHNOLOGY AND BIOENGINEERING (2009)
Annotation Error in Public Databases: Misannotation of Molecular Function in Enzyme Superfamilies
Alexandra M. Schnoes et al.
PLOS COMPUTATIONAL BIOLOGY (2009)
Systems biology approaches to bioremediation
Victor de Lorenzo
CURRENT OPINION IN BIOTECHNOLOGY (2008)
Impact of bioavailability restrictions on microbially induced stable isotope fractionation. 2. Experimental evidence
Makeba Kampara et al.
ENVIRONMENTAL SCIENCE & TECHNOLOGY (2008)
Microbial interactions with organic contaminants in soil: Definitions, processes and measurement
Kirk T. Semple et al.
ENVIRONMENTAL POLLUTION (2007)
Application of advanced MS techniques to analysis and identification of human and microbial metabolites of pharmaceuticals in the aquatic environment
Sandra Perez et al.
TRAC-TRENDS IN ANALYTICAL CHEMISTRY (2007)
Growth and yields of dechlorinators, acetogens, and methanogens during reductive dechlorination of chlorinated ethenes and dihaloelimination of 1,2-dichloroethane
Melanie Duhamel et al.
ENVIRONMENTAL SCIENCE & TECHNOLOGY (2007)