Related references
Note: Only part of the references are listed.Qki activates Srebp2-mediated cholesterol biosynthesis for maintenance of eye lens transparency
Seula Shin et al.
NATURE COMMUNICATIONS (2021)
A global screening identifies chromatin-enriched RNA-binding proteins and the transcriptional regulatory activity of QKI5 during monocytic differentiation
Yue Ren et al.
GENOME BIOLOGY (2021)
Inhibition of Osteoclastogenesis by the RNA-Binding Protein QKI5: a Novel Approach to Protect from Bone Resorption
Benjamin Rauwel et al.
JOURNAL OF BONE AND MINERAL RESEARCH (2020)
Mature myelin maintenance requires Qki to coactivate PPAR beta-RXR alpha-mediated lipid metabolism
Xin Zhou et al.
JOURNAL OF CLINICAL INVESTIGATION (2020)
A large-scale binding and functional map of human RNA-binding proteins
Eric L. Van Nostrand et al.
NATURE (2020)
Post-transcriptional regulation in hematopoiesis: RNA binding proteins take control
Laura P. M. H. de Rooij et al.
BIOCHEMISTRY AND CELL BIOLOGY (2019)
An RNA Switch of a Large Exon of Ninein Is Regulated by the Neural Stem Cell Specific-RNA Binding Protein, Qki5
Yoshika Hayakawa-Yano et al.
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES (2019)
RNA-binding proteins in hematopoiesis and hematological malignancy
Daniel J. Hodson et al.
BLOOD (2019)
RNA Targets Ribogenesis Factor WDR43 to Chromatin for Transcription and Pluripotency Control
Xianju Bi et al.
MOLECULAR CELL (2019)
Pervasive Chromatin-RNA Binding Protein Interactions Enable RNA-Based Regulation of Transcription
Rui Xiao et al.
CELL (2019)
Translational regulation and deregulation in erythropoiesis
Alexandra Vatikioti et al.
EXPERIMENTAL HEMATOLOGY (2019)
UniProt: a worldwide hub of protein knowledge
Alex Bateman et al.
NUCLEIC ACIDS RESEARCH (2019)
NextPBM: a platform to study cell-specific transcription factor binding and cooperativity
Nima Mohaghegh et al.
NUCLEIC ACIDS RESEARCH (2019)
The nuclear matrix protein HNRNPU maintains 3D genome architecture globally in mouse hepatocytes
Hui Fan et al.
GENOME RESEARCH (2018)
HOCOMOCO: towards a complete collection of transcription factor binding models for human and mouse via large-scale ChIP-Seq analysis
Ivan V. Kulakovskiy et al.
NUCLEIC ACIDS RESEARCH (2018)
JASPAR 2018: update of the open-access database of transcription factor binding profiles and its web framework (vol 46, pg 260, 2017)
Aziz Khan et al.
NUCLEIC ACIDS RESEARCH (2018)
Partners in crime: neutrophils and monocytes/macrophages in inflammation and disease
Kathryn Prame Kumar et al.
CELL AND TISSUE RESEARCH (2018)
Arabidopsis ARGONAUTE 1 Binds Chromatin to Promote Gene Transcription in Response to Hormones and Stresses
Chang Liu et al.
DEVELOPMENTAL CELL (2018)
The RNA binding protein Ars2 supports hematopoiesis at multiple levels
Seerat Elahi et al.
EXPERIMENTAL HEMATOLOGY (2018)
RNA-binding proteins control gene expression and cell fate in the immune system
Martin Turner et al.
NATURE IMMUNOLOGY (2018)
Quaking Inhibits Doxorubicin-Mediated Cardiotoxicity Through Regulation of Cardiac Circular RNA Expression
Shashi Kumar Gupta et al.
CIRCULATION RESEARCH (2018)
Strap associates with Csde1 and affects expression of select Csde1-bound transcripts
Kat S. Moore et al.
PLOS ONE (2018)
RNA Binding Proteins and Regulation of mRNA Translation in Erythropoiesis
Kat S. Moore et al.
FRONTIERS IN PHYSIOLOGY (2018)
Impaired hematopoiesis and leukemia development in mice with a conditional knock-in allele of a mutant splicing factor gene U2af1
Dennis Liang Fei et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2018)
An RNA-binding protein, Qki5, regulates embryonic neural stem cells through pre-mRNA processing in cell adhesion signaling
Yoshika Hayakawa-Yano et al.
GENES & DEVELOPMENT (2017)
Neonatal expression of RNA-binding protein IGF2BP3 regulates the human fetal-adult megakaryocyte transition
Kamaleldin E. Elagib et al.
JOURNAL OF CLINICAL INVESTIGATION (2017)
Promoter-bound METTL3 maintains myeloid leukaemia by m6A-dependent translation control
Isaia Barbieri et al.
NATURE (2017)
PAF1 regulation of promoter-proximal pause release via enhancer activation
Fei Xavier Chen et al.
SCIENCE (2017)
KSRP specifies monocytic and granulocytic differentiation through regulating miR-129 biogenesis and RUNX1 expression
Hongmei Zhao et al.
NATURE COMMUNICATIONS (2017)
Identification of high-confidence RNA regulatory elements by combinatorial classification of RNA-protein binding sites
Yang Eric Li et al.
GENOME BIOLOGY (2017)
The Mammalian Ribo-interactome Reveals Ribosome Functional Diversity and Heterogeneity
Deniz Simsek et al.
CELL (2017)
The RNA-binding protein QKI5 regulates primary miR-124-1 processing via a distal RNA motif during erythropoiesis
Fang Wang et al.
CELL RESEARCH (2017)
Lin28A Binds Active Promoters and Recruits Tet1 to Regulate Gene Expression
Yaxue Zeng et al.
MOLECULAR CELL (2016)
Robust transcriptome-wide discovery of RNA-binding protein binding sites with enhanced CLIP (eCLIP)
Eric L. Van Nostrand et al.
NATURE METHODS (2016)
deepTools2: a next generation web server for deep-sequencing data analysis
Fidel Ramirez et al.
NUCLEIC ACIDS RESEARCH (2016)
Quaking promotes monocyte differentiation into pro-atherogenic macrophages by controlling pre-mRNA splicing and gene expression
Ruben G. de Bruin et al.
NATURE COMMUNICATIONS (2016)
ATtRACT-a database of RNA-binding proteins and associated motifs
Girolamo Giudice et al.
DATABASE-THE JOURNAL OF BIOLOGICAL DATABASES AND CURATION (2016)
WDR5 high expression and its effect on tumorigenesis in leukemia
Zheng Ge et al.
ONCOTARGET (2016)
ChIPseeker: an R/Bioconductor package for ChIP peak annotation, comparison and visualization
Guangchuang Yu et al.
BIOINFORMATICS (2015)
Regulatory Roles of Rpl22 in Hematopoiesis: An Old Dog with New Tricks
Shawn P. Fahl et al.
CRITICAL REVIEWS IN IMMUNOLOGY (2015)
SRSF2 Is Essential for Hematopoiesis, and Its Myelodysplastic Syndrome-Related Mutations Dysregulate Alternative Pre-mRNA Splicing
Yukiko Komeno et al.
MOLECULAR AND CELLULAR BIOLOGY (2015)
Quantification of nascent transcription by bromouridine immunocapture nuclear run-on RT-qPCR
Thomas C. Roberts et al.
NATURE PROTOCOLS (2015)
MicroRNA-124 Targets Tip110 Expression and Regulates Hematopoiesis
Ying Liu et al.
STEM CELLS AND DEVELOPMENT (2015)
Genomic analysis of ADAR1 binding and its involvement in multiple RNA processing pathways
Jae Hoon Bahn et al.
NATURE COMMUNICATIONS (2015)
ZFP36L1 promotes monocyte/macrophage differentiation by repressing CDK6
Ming-Tai Chen et al.
SCIENTIFIC REPORTS (2015)
HTSeq-a Python framework to work with high-throughput sequencing data
Simon Anders et al.
BIOINFORMATICS (2015)
Muscleblind-like 1 (Mbnl1) regulates pre-mRNA alternative splicing during terminal erythropoiesis
Albert W. Cheng et al.
BLOOD (2014)
Cpeb4-Mediated Translational Regulatory Circuitry Controls Terminal Erythroid Differentiation
Wenqian Hu et al.
DEVELOPMENTAL CELL (2014)
Knockdown of Hnrnpa0, a del(5q) gene, alters myeloid cell fate in murine cells through regulation of AU-rich transcripts
David J. Young et al.
HAEMATOLOGICA (2014)
Coupling mRNA processing with transcription in time and space
David L. Bentley
NATURE REVIEWS GENETICS (2014)
Olive (Olea europaea) Leaf Extract Induces Apoptosis and Monocyte/Macrophage Differentiation in Human Chronic Myelogenous Leukemia K562 Cells: Insight into the Underlying Mechanism
Imen Samet et al.
OXIDATIVE MEDICINE AND CELLULAR LONGEVITY (2014)
Ubiquitous Expression of MAKORIN-2 in Normal and Malignant Hematopoietic Cells and Its Growth Promoting Activity
King Yiu Lee et al.
PLOS ONE (2014)
Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2
Michael I. Love et al.
GENOME BIOLOGY (2014)
STAR: ultrafast universal RNA-seq aligner
Alexander Dobin et al.
BIOINFORMATICS (2013)
Integrative Genomics Viewer (IGV): high-performance genomics data visualization and exploration
Helga Thorvaldsdottir et al.
BRIEFINGS IN BIOINFORMATICS (2013)
In vivo mutation of pre-mRNA processing factor 8 (Prpf8) affects transcript splicing, cell survival and myeloid differentiation
Maria-Cristina Keightley et al.
FEBS LETTERS (2013)
Rbfox proteins regulate alternative mRNA splicing through evolutionarily conserved RNA bridges
Michael T. Lovci et al.
NATURE STRUCTURAL & MOLECULAR BIOLOGY (2013)
Precision Mechanics with Multifunctional Tools: How HnRNP K and HnRNPs E1/E2 Contribute to Post-Transcriptional Control of Gene Expression in Hematopoiesis
Antje Ostareck-Lederer et al.
CURRENT PROTEIN & PEPTIDE SCIENCE (2012)
The RNA-binding protein QKI5 is a direct target of C/EBPα and delays macrophage differentiation
Haiyan Fu et al.
MOLECULAR BIOLOGY OF THE CELL (2012)
Modular regulatory principles of large non-coding RNAs
Mitchell Guttman et al.
NATURE (2012)
An integrated encyclopedia of DNA elements in the human genome
Ian Dunham et al.
NATURE (2012)
Fast gapped-read alignment with Bowtie 2
Ben Langmead et al.
NATURE METHODS (2012)
clusterProfiler: an R Package for Comparing Biological Themes Among Gene Clusters
Guangchuang Yu et al.
OMICS-A JOURNAL OF INTEGRATIVE BIOLOGY (2012)
Oncomir miR-125b regulates hematopoiesis by targeting the gene Lin28A
Aadel A. Chaudhuri et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2012)
AU-rich RNA binding proteins in hematopoiesis and leukemogenesis
Maria Baou et al.
BLOOD (2011)
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
Pascale Gaudet et al.
BRIEFINGS IN BIOINFORMATICS (2011)
RNA Binding Protein QKI Inhibits the Ischemia/reperfusion-induced Apoptosis in Neonatal Cardiomyocytes
Wangang Guo et al.
CELLULAR PHYSIOLOGY AND BIOCHEMISTRY (2011)
Mutation in the RNA binding protein TIS11D/ZFP36L2 is associated with the pathogenesis of acute leukemia
Eisaku Iwanaga et al.
INTERNATIONAL JOURNAL OF ONCOLOGY (2011)
Transcriptome-wide Analysis of Regulatory Interactions of the RNA-Binding Protein HuR
Svetlana Lebedeva et al.
MOLECULAR CELL (2011)
lincRNAs act in the circuitry controlling pluripotency and differentiation
Mitchell Guttman et al.
NATURE (2011)
RBPDB: a database of RNA-binding specificities
Kate B. Cook et al.
NUCLEIC ACIDS RESEARCH (2011)
Inferring transcription factor complexes from ChIP-seq data
Tom Whitington et al.
NUCLEIC ACIDS RESEARCH (2011)
An ataxia-telangiectasia-mutated (ATM) kinase mediated response to DNA damage down-regulates the mRNA-binding potential of THOC5
Sheetal Ramachandran et al.
RNA (2011)
Predicting sites of ADAR editing in double-stranded RNA
Julie M. Eggington et al.
NATURE COMMUNICATIONS (2011)
Assigning roles to DNA regulatory motifs using comparative genomics
Fabian A. Buske et al.
BIOINFORMATICS (2010)
An RNAi Screen Identifies Msi2 and Prox1 as Having Opposite Roles in the Regulation of Hematopoietic Stem Cell Activity
Kristin J. Hope et al.
CELL STEM CELL (2010)
FET family proto-oncogene Fus contributes to self-renewal of hematopoietic stem cells
Takeaki Sugawara et al.
EXPERIMENTAL HEMATOLOGY (2010)
Simple Combinations of Lineage-Determining Transcription Factors Prime cis-Regulatory Elements Required for Macrophage and B Cell Identities
Sven Heinz et al.
MOLECULAR CELL (2010)
TopHat: discovering splice junctions with RNA-Seq
Cole Trapnell et al.
BIOINFORMATICS (2009)
The Sequence Alignment/Map format and SAMtools
Heng Li et al.
BIOINFORMATICS (2009)
c-Myc is a target of RNA-binding motif protein 15 in the regulation of adult hematopoietic stem cell and megakaryocyte development
Chao Niu et al.
BLOOD (2009)
Profiling the Human Protein-DNA Interactome Reveals ERK2 as a Transcriptional Repressor of Interferon Signaling
Shaohui Hu et al.
CELL (2009)
Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists
Da Wei Huang et al.
NUCLEIC ACIDS RESEARCH (2009)
RNA-binding proteins and post-transcriptional gene regulation
Tina Glisovic et al.
FEBS LETTERS (2008)
RNA-binding proteins: modular design for efficient function
Bradley M. Lunde et al.
NATURE REVIEWS MOLECULAR CELL BIOLOGY (2007)
Knock-down of 25 kDa subunit of cleavage factor Im in Hela cells alters alternative polyadenylation within 3′-UTRs
Tomohiro Kubo et al.
NUCLEIC ACIDS RESEARCH (2006)
QKI binds MAP1B mRNA and enhances MAP1B expression during oligodendrocyte development
Lixia Zhao et al.
MOLECULAR BIOLOGY OF THE CELL (2006)
Noncoding RNAs of trithorax response elements recruit Drosophila Ash1 to ultrabithorax
T Sanchez-Elsner et al.
SCIENCE (2006)
Target RNA motif and target mRNAs of the Quaking STAR protein
A Galarneau et al.
NATURE STRUCTURAL & MOLECULAR BIOLOGY (2005)
Public web-based services from the European Bioinformatics Institute
N Harte et al.
NUCLEIC ACIDS RESEARCH (2004)
A KH domain RNA binding protein, KSRP, promotes ARE-directed mRNA turnover by recruiting the degradation machinery
R Gherzi et al.
MOLECULAR CELL (2004)
mRNA openers and closers:: Modulating AU-rich element-controlled mRNA stability by a molecular switch in mRNA secondary structure
NC Meisner et al.
CHEMBIOCHEM (2004)
A mechanism for the regulation of pre-mRNA 3′ processing by human cleavage factor Im
KM Brown et al.
MOLECULAR CELL (2003)
Human Sin3 deacetylase and trithorax-related Set1/Ash2 histone H3-K4 methyltransferase are tethered together selectively by the cell-proliferation factor HCF-1
J Wysocka et al.
GENES & DEVELOPMENT (2003)
Cytoscape: A software environment for integrated models of biomolecular interaction networks
P Shannon et al.
GENOME RESEARCH (2003)
Identification of unique truncated KC/GROβ chemokines with potent hematopoietic and anti-infective activities
AG King et al.
JOURNAL OF IMMUNOLOGY (2000)