Related references
Note: Only part of the references are listed.Rumen Epithelial Communities Share a Core Bacterial Microbiota: A Meta-Analysis of 16S rRNA Gene Illumina MiSeq Sequencing Datasets
Chiron J. Anderson et al.
FRONTIERS IN MICROBIOLOGY (2021)
Total RNA sequencing reveals multilevel microbial community changes and functional responses to wood ash application in agricultural and forest soil
Toke Bang-Andreasen et al.
FEMS MICROBIOLOGY ECOLOGY (2020)
Feed Additives Differentially Impact the Epimural Microbiota and Host Epithelial Gene Expression of the Bovine Rumen Fed Diets Rich in Concentrates
Renee Maxine Petri et al.
FRONTIERS IN MICROBIOLOGY (2020)
Metatranscriptome Sequencing Reveals Insights into the Gene Expression and Functional Potential of Rumen Wall Bacteria
Evelyne Mann et al.
FRONTIERS IN MICROBIOLOGY (2018)
Transcriptome analysis in whole blood reveals increased microbial diversity in schizophrenia
Loes M. Olde Loohuis et al.
TRANSLATIONAL PSYCHIATRY (2018)
The ruminal microbiome associated with methane emissions from ruminant livestock
Ilma Tapio et al.
JOURNAL OF ANIMAL SCIENCE AND BIOTECHNOLOGY (2017)
Metatranscriptomic Profiling Reveals Linkages between the Active Rumen Microbiome and Feed Efficiency in Beef Cattle
Fuyong Li et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2017)
Transcriptome profiling of the rumen epithelium of beef cattle differing in residual feed intake
Rebecca S. G. Kong et al.
BMC GENOMICS (2016)
Few Highly Abundant Operational Taxonomic Units Dominate within Rumen Methanogenic Archaeal Species in New Zealand Sheep and Cattle
Henning Seedorf et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2015)
RIM-DB: a taxonomic framework for community structure analysis of methanogenic archaea from the rumen and other intestinal environments
Henning Seedorf et al.
PEERJ (2014)
Changes in the Rumen Epimural Bacterial Diversity of Beef Cattle as Affected by Diet and Induced Ruminal Acidosis
R. M. Petri et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2013)
Identification of metabolically active proteobacterial and archaeal communities in the rumen by DNA- and RNA-derived 16S rRNA gene
S. H. Kang et al.
JOURNAL OF APPLIED MICROBIOLOGY (2013)
TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions
Daehwan Kim et al.
GENOME BIOLOGY (2013)
Impact of Feed Efficiency and Diet on Adaptive Variations in the Bacterial Community in the Rumen Fluid of Cattle
Emma Hernandez-Sanabria et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2012)
SortMeRNA: fast and accurate filtering of ribosomal RNAs in metatranscriptomic data
Evguenia Kopylova et al.
BIOINFORMATICS (2012)
Fast gapped-read alignment with Bowtie 2
Ben Langmead et al.
NATURE METHODS (2012)
Evaluation of Methods for the Extraction and Purification of DNA from the Human Microbiome
Sanqing Yuan et al.
PLOS ONE (2012)
Characterization of bovine ruminal epithelial bacterial communities using 16S rRNA sequencing, PCR-DGGE, and qRT-PCR analysis
Meiju Li et al.
VETERINARY MICROBIOLOGY (2012)
Changes in Bacterial Diversity Associated with Epithelial Tissue in the Beef Cow Rumen during the Transition to a High-Grain Diet
Yanhong Chen et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2011)
Diversity, abundance and novel 16S rRNA gene sequences of methanogens in rumen liquid, solid and epithelium fractions of Jinnan cattle
Cai-Xia Pei et al.
ANIMAL (2010)
Microbial ecosystem and methanogenesis in ruminants
D. P. Morgavi et al.
ANIMAL (2010)
Characterization of Variation in Rumen Methanogenic Communities under Different Dietary and Host Feed Efficiency Conditions, as Determined by PCR-Denaturing Gradient Gel Electrophoresis Analysis
Mi Zhou et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2010)
Search and clustering orders of magnitude faster than BLAST
Robert C. Edgar
BIOINFORMATICS (2010)
Assessment of the Microbial Ecology of Ruminal Methanogens in Cattle with Different Feed Efficiencies
Mi Zhou et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2009)
Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities
Patrick D. Schloss et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2009)
Structure of the archaeal community of the rumen
Peter H. Janssen et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2008)
Cattle selected for lower residual feed intake have reduced daily methane production
R. S. Hegarty et al.
JOURNAL OF ANIMAL SCIENCE (2007)
Phylogenomic analysis of proteins that are distinctive of Archaea and its main subgroups and the origin of methanogenesis
Beile Gao et al.
BMC GENOMICS (2007)
Phylogenetic analysis of archaea in three fractions of cow rumen based on the 16S rDNA sequence
EC Shin et al.
ANAEROBE (2004)
Residual feed intake and body composition in young growing cattle
JA Basarab et al.
CANADIAN JOURNAL OF ANIMAL SCIENCE (2003)
Characterization of superoxide dismutase in the rumen bacterium Streptococcus bovis
K Holovská et al.
VETERINARNI MEDICINA (2002)
Share Paper
