3.9 Article

Biallelic variants in TAMM41 are associated with low muscle cardiolipin levels, leading to neonatal mitochondrial disease

Journal

HUMAN GENETICS AND GENOMICS ADVANCES
Volume 3, Issue 2, Pages -

Publisher

ELSEVIER
DOI: 10.1016/j.xhgg.2022.100097

Keywords

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Funding

  1. Agence Nationale de la Recherche through the Investissements d'Avenir program [ANR-10-IAHU-01]
  2. E-Rare project GENOMIT [01GM1207]
  3. French National Agency for Research [ANR-16-CE16-0025-04]
  4. Association Francaise contre les Myopathies [AFM -MITOSCREEN, 17122, BB-033-00065]
  5. Wellcome Trust Centre for Mitochondrial Research [203105/Z/16/Z]
  6. Medical Research Council (MRC) International Center for Genomic Medicine in Neuromuscular Disease [MR/S005021/1]
  7. Mitochondrial Disease Patient Cohort (UK) [G0800674]
  8. UK NIHR Biomedical Research Center for Aging and Age-Related Disease Award
  9. Newcastle upon Tyne Foundation Hospitals NHS Trust
  10. Lily Foundation
  11. UK NHS Specialist Commissioners
  12. Rare Mitochondrial Disorders of Adults and Children Diagnostic Service in Newcastle upon Tyne
  13. Pathology Society
  14. NIH National Institute of Neurological Disorders and Stroke
  15. Broad Institute of MIT and Harvard Center for Mendelian Genomics - National Human Genome Research Institute
  16. National Eye Institute
  17. National Heart, Lung, and Blood Institute [UM1 HG008900]
  18. Agence Nationale de la Recherche (ANR) [ANR-16-CE16-0025] Funding Source: Agence Nationale de la Recherche (ANR)

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Mitochondrial disorders are characterized by clinical and genetic heterogeneity. This study identified compound heterozygous variants in the TAMM41 gene in three unrelated individuals with mitochondrial disease. Functional analyses confirmed the pathogenicity of these variants, which resulted in mitochondrial dysfunction and impaired phospholipid biosynthesis.
Mitochondrial disorders are clinically and genetically heterogeneous, with variants in mitochondrial or nuclear genes leading to varied clinical phenotypes. TAMM41 encodes a mitochondrial protein with cytidine diphosphate-diacylglycerol synthase activity: an essential early step in the biosynthesis of phosphatidylglycerol and cardiolipin. Cardiolipin is a mitochondria-specific phospholipid that is important for many mitochondrial processes. We report three unrelated individuals with mitochondrial disease that share clinical features, including lethargy at birth, hypotonia, developmental delay, myopathy, and ptosis. Whole exome and genome sequencing identified compound heterozygous variants in TAMM41 in each proband. Western blot analysis in fibroblasts showed a mild oxidative phosphorylation (OXPHOS) defect in only one of the three affected individuals. In skeletal muscle samples, however, there was severe loss of sub-units of complexes I-IV and a decrease in fully assembled OXPHOS complexes I-V in two subjects as well as decreased TAMM41 protein levels. Similar to the tissue-specific observations on OXPHOS, cardiolipin levels were unchanged in subject fibroblasts but significantly decreased in the skeletal muscle of affected individuals. To assess the functional impact of the TAMM41 missense variants, the equivalent mutations were modeled in yeast. All three mutants failed to rescue the growth defect of the Delta tam41 strains on non-fermentable (respiratory) medium compared with wild-type TAM41, confirming the pathogenicity of the variants. We establish that TAMM41 is an additional gene involved in mitochondrial phospholipid biosynthesis and modification and that its deficiency results in a mitochondrial disorder, though unlike families with pathogenic AGK (Sengers syndrome) and TAFAZZIN (Barth syndrome) variants, there was no evidence of cardiomyopathy.

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