4.3 Article

On the release of cppxfel for processing X-ray free-electron laser images

Journal

JOURNAL OF APPLIED CRYSTALLOGRAPHY
Volume 49, Issue -, Pages 1065-1072

Publisher

INT UNION CRYSTALLOGRAPHY
DOI: 10.1107/S1600576716006981

Keywords

X-ray free-electron lasers; XFELS; serial femtosecond crystallography; data analysis; computer programs.

Funding

  1. MRC [MR/N00065X/1] Funding Source: UKRI
  2. Medical Research Council [MR/N00065X/1] Funding Source: Medline
  3. NIGMS NIH HHS [R01 GM095887, R01 GM102520] Funding Source: Medline
  4. Wellcome Trust Funding Source: Medline

Ask authors/readers for more resources

As serial femtosecond crystallography expands towards a variety of delivery methods, including chip-based methods, and smaller collected data sets, the requirement to optimize the data analysis to produce maximum structure quality is becoming increasingly pressing. Here cppxfel, a software package primarily written in C++, which showcases several data analysis techniques, is released. This software package presently indexes images using DIALS (diffraction integration for advanced light sources) and performs an initial orientation matrix refinement, followed by post-refinement of individual images against a reference data set. Cppxfel is released with the hope that the unique and useful elements of this package can be repurposed for existing software packages. However, as released, it produces high-quality crystal structures and is therefore likely to be also useful to experienced users of X-ray free-electron laser (XFEL) software who wish to maximize the information extracted from a limited number of XFEL images.

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