Related references
Note: Only part of the references are listed.Efficient ancestry and mutation simulation with msprime 1.0
Franz Baumdicker et al.
GENETICS (2022)
Fast and accurate estimation of multidimensional site frequency spectra from low-coverage high-throughput sequencing data
Alex Mas-Sandoval et al.
GIGASCIENCE (2022)
Sequencing error profiles of Illumina sequencing instruments
Nicholas Stoler et al.
NAR GENOMICS AND BIOINFORMATICS (2021)
Gene flow as a simple cause for an excess of high-frequency-derived alleles
Nina Marchi et al.
EVOLUTIONARY APPLICATIONS (2020)
ngsLD: evaluating linkage disequilibrium using genotype likelihoods
Emma A. Fox et al.
BIOINFORMATICS (2019)
Fast and accurate relatedness estimation from high-throughput sequencing data in the presence of inbreeding
Kristian Hanghoj et al.
GIGASCIENCE (2019)
Improving the estimation of genetic distances from Next-Generation Sequencing data
Filipe G. Vieira et al.
BIOLOGICAL JOURNAL OF THE LINNEAN SOCIETY (2016)
Advancements in Next-Generation Sequencing
Shawn E. Levy et al.
ANNUAL REVIEW OF GENOMICS AND HUMAN GENETICS, VOL 17 (2016)
Estimating IBD tracts from low coverage NGS data
Filipe G. Vieira et al.
BIOINFORMATICS (2016)
The mutation rate in human evolution and demographic inference
Aylwyn Scally
CURRENT OPINION IN GENETICS & DEVELOPMENT (2016)
Can the Site-Frequency Spectrum Distinguish Exponential Population Growth from Multiple-Merger Coalescents?
Bjarki Eldon et al.
GENETICS (2015)
A global reference for human genetic variation
David M. Altshuler et al.
NATURE (2015)
Fast and accurate site frequency spectrum estimation from low coverage sequence data
Eunjung Han et al.
BIOINFORMATICS (2015)
ngsTools: methods for population genetics analyses from next-generation sequencing data
Matteo Fumagalli et al.
BIOINFORMATICS (2014)
ANGSD: Analysis of Next Generation Sequencing Data
Thorfinn Sand Korneliussen et al.
BMC BIOINFORMATICS (2014)
Calculation of Tajima's D and other neutrality test statistics from low depth next-generation sequencing data
Thorfinn Sand Korneliussen et al.
BMC BIOINFORMATICS (2013)
DETECTING RANGE EXPANSIONS FROM GENETIC DATA
Benjamin M. Peter et al.
EVOLUTION (2013)
Quantifying Population Genetic Differentiation from Next-Generation Sequencing Data
Matteo Fumagalli et al.
GENETICS (2013)
Estimating and interpreting FST: The impact of rare variants
Gaurav Bhatia et al.
GENOME RESEARCH (2013)
Assessing the Effect of Sequencing Depth and Sample Size in Population Genetics Inferences
Matteo Fumagalli
PLOS ONE (2013)
A statistical framework for SNP calling, mutation discovery, association mapping and population genetical parameter estimation from sequencing data
Heng Li
BIOINFORMATICS (2011)
Estimation of allele frequency and association mapping using next-generation sequencing data
Su Yeon Kim et al.
BMC BIOINFORMATICS (2011)
Genotype and SNP calling from next-generation sequencing data
Rasmus Nielsen et al.
NATURE REVIEWS GENETICS (2011)
The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data
Aaron McKenna et al.
GENOME RESEARCH (2010)
Sequencing of 50 Human Exomes Reveals Adaptation to High Altitude
Xin Yi et al.
SCIENCE (2010)
SNP detection for massively parallel whole-genome resequencing
Ruiqiang Li et al.
GENOME RESEARCH (2009)
Inferring the Joint Demographic History of Multiple Populations from Multidimensional SNP Frequency Data
Ryan N. Gutenkunst et al.
PLOS GENETICS (2009)
A fine-scale map of recombination rates and hotspots across the human genome
S Myers et al.
SCIENCE (2005)
Molecular signatures of natural selection
R Nielsen
ANNUAL REVIEW OF GENETICS (2005)
Generating samples under a Wright-Fisher neutral model of genetic variation
RR Hudson
BIOINFORMATICS (2002)