4.7 Review

Modern venomics-Current insights, novel methods, and future perspectives in biological and applied animal venom research

Journal

GIGASCIENCE
Volume 11, Issue -, Pages -

Publisher

OXFORD UNIV PRESS
DOI: 10.1093/gigascience/giac048

Keywords

venom; modern venomics; genomics; spatial -omics; evolution; translational research; bioassays; envenomation; antivenom; toxin production

Funding

  1. European Cooperation in Science and Technology (COST)
  2. COST Action - European Venom Network [CA19144]
  3. German Science Foundation [DFG RE3454/6-1]
  4. European Union [896849, 841576, 845674]
  5. TALENTO Program by the Regional Madrid Government [2018-T1/BIO-11262]
  6. DFG [271522021, 413120531]
  7. Danish Council for Independent Research (Technology and Production Sciences) [7017-00288]
  8. Research Fund of Nevsehir Haci Bektas Veli University [ABAP20F28, BAP18F26]
  9. GSRT National Research Infrastructure structural funding project INSPIRED [MIS 5002550]
  10. Slovenian Research Agency [P1-0391, J4-8225, J4-2547]
  11. Institute for Medical Research and Occupational Health, Zagreb, Croatia
  12. Norwegian Research Council FRIPRO-YRT Fellowship [287462]
  13. Marie Curie Actions (MSCA) [896849, 845674, 841576] Funding Source: Marie Curie Actions (MSCA)

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Venoms have evolved multiple times in different animal groups, with their components known as toxins being highly effective biochemical weapons. However, there are still many unanswered questions regarding the evolution of venom arsenals, and these questions have received little attention outside of certain animal groups. The study of venomous animals and their toxins has provided inspiration for translational research, and recent technological advancements have greatly improved venom research. Understanding the genomics and modifications of toxins is important in understanding their evolution and functions during different stages of development. Advanced imaging techniques and computer tomography also provide insights into the distribution and function of toxins in the venom system. The knowledge gained from studying venomous animals contributes to the identification and synthesis of venom compounds, which have potential benefits in various fields such as agriculture, pharmaceuticals, therapeutics, and diagnostics.
Venoms have evolved >100 times in all major animal groups, and their components, known as toxins, have been fine-tuned over millions of years into highly effective biochemical weapons. There are many outstanding questions on the evolution of toxin arsenals, such as how venom genes originate, how venom contributes to the fitness of venomous species, and which modifications at the genomic, transcriptomic, and protein level drive their evolution. These questions have received particularly little attention outside of snakes, cone snails, spiders, and scorpions. Venom compounds have further become a source of inspiration for translational research using their diverse bioactivities for various applications. We highlight here recent advances and new strategies in modern venomics and discuss how recent technological innovations and multi-omic methods dramatically improve research on venomous animals. The study of genomes and their modifications through CRISPR and knockdown technologies will increase our understanding of how toxins evolve and which functions they have in the different ontogenetic stages during the development of venomous animals. Mass spectrometry imaging combined with spatial transcriptomics, in situ hybridization techniques, and modern computer tomography gives us further insights into the spatial distribution of toxins in the venom system and the function of the venom apparatus. All these evolutionary and biological insights contribute to more efficiently identify venom compounds, which can then be synthesized or produced in adapted expression systems to test their bioactivity. Finally, we critically discuss recent agrochemical, pharmaceutical, therapeutic, and diagnostic (so-called translational) aspects of venoms from which humans benefit.

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