Establishment and validation of individualized clinical prognostic markers for LUAD patients based on autophagy-related genes

There is considerable heterogeneity in the genomic drivers of lung adenocarcinoma, which has a dismal prognosis. Bioinformatics analysis was performed on lung adenocarcinoma (LUAD) datasets to establish a multi-autophagy gene model to predict patient prognosis. LUAD data were downloaded from The Cancer Genome Atlas (TCGA) database as a training set to construct a LUAD prognostic model. According to the risk score, a Kaplan-Meier cumulative curve was plotted to evaluate the prognostic value. Furthermore, a nomogram was established to predict the three-year and five-year survival of patients with LUAD based on their prognostic characteristics. Two genes (ITGB1 and EIF2AK3) were identified in the autophagy-related prognostic model, and the multivariate Cox proportional risk model showed that risk score was an independent predictor of prognosis in LUAD patients (HR=3.3, 95%CI= 2.3 to 4.6, P < 0.0001). The Kaplan-Meier cumulative curve showed that low-risk patients had significantly better overall (P < 0.0001). The validation dataset GSE68465 further confirmed the nomogram's robust ability to assess the prognosis of LUAD patients. A prognosis model of autophagy-related genes based on a LUAD dataset was constructed and exhibited diagnostic value in the prognosis of LUAD patients. Moreover, real-time qPCR confirmed the expression patterns of EIF2AK3 and ITGB1 in LUAD cell lines. Two key autophagy-related genes have been suggested as prognostic markers for lung adenocarcinoma.

Automated summary

A bioinformatics analysis established a prognostic model for LUAD based on multiple autophagy-related genes, with ITGB1 and EIF2AK3 identified as key genes associated with prognosis. The risk score was shown to be an independent predictor of prognosis in LUAD patients, with low-risk patients having significantly better outcomes. Real-time qPCR confirmed the expression patterns of EIF2AK3 and ITGB1 in LUAD cell lines, supporting their potential as prognostic markers.