Related references
Note: Only part of the references are listed.Akkermansia muciniphila and its role in regulating host functions
Muriel Derrien et al.
MICROBIAL PATHOGENESIS (2017)
2016 update of the PRIDE database and its related tools
Juan Antonio Vizcaino et al.
NUCLEIC ACIDS RESEARCH (2016)
Architecture of the type IVa pilus machine
Yi-Wei Chang et al.
SCIENCE (2016)
Akkermansia muciniphila Adheres to Enterocytes and Strengthens the Integrity of the Epithelial Cell Layer
Justus Reunanen et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2015)
Surface proteins of Propionibacterium freudenreichii are involved in its anti-inflammatory properties
Caroline Le Marechal et al.
JOURNAL OF PROTEOMICS (2015)
Proteomic Profiling of the Outer Membrane Fraction of the Obligate Intracellular Bacterial Pathogen Ehrlichia ruminantium
Amal Moumene et al.
PLOS ONE (2015)
Discovery of intramolecular trans-sialidases in human gut microbiota suggests novel mechanisms of mucosal adaptation
Louise E. Tailford et al.
NATURE COMMUNICATIONS (2015)
Analysis of the Outer Membrane Proteome and Secretome of Bacteroides fragilis Reveals a Multiplicity of Secretion Mechanisms
Marlena M. Wilson et al.
PLOS ONE (2015)
Exceptionally widespread nanomachines composed of type IV pilins: the prokaryotic Swiss Army knives
Jamie-Lee Berry et al.
FEMS MICROBIOLOGY REVIEWS (2015)
An increase in the Akkermansia spp. population induced by metformin treatment improves glucose homeostasis in diet-induced obese mice
Na-Ri Shin et al.
GUT (2014)
Accurate Proteome-wide Label-free Quantification by Delayed Normalization and Maximal Peptide Ratio Extraction, Termed MaxLFQ
Juergen Cox et al.
MOLECULAR & CELLULAR PROTEOMICS (2014)
Pfam: the protein families database
Robert D. Finn et al.
NUCLEIC ACIDS RESEARCH (2014)
Proteomic analysis of outer membrane vesicles from the probiotic strain Escherichia coli Nissle 1917
Laura Aguilera et al.
PROTEOMICS (2014)
PVC bacteria: variation of, but not exception to, the Gram-negative cell plan
Damien P. Devos
TRENDS IN MICROBIOLOGY (2014)
Preferential Packing of Acidic Glycosidases and Proteases into Bacteroides Outer Membrane Vesicles
Wael Elhenawy et al.
MBIO (2014)
Functional Mapping of PilF and PilQ in the Pseudomonas aeruginosa Type IV Pilus System
Jason Koo et al.
BIOCHEMISTRY (2013)
Phylogenetic Analysis of Dysbiosis in Ulcerative Colitis During Remission
Mirjana Rajilic-Stojanovic et al.
INFLAMMATORY BOWEL DISEASES (2013)
High-level colonisation of the human gut by Verrucomicrobia following broad-spectrum antibiotic treatment
Gregory Dubourg et al.
INTERNATIONAL JOURNAL OF ANTIMICROBIAL AGENTS (2013)
Development of an ecophysiological model for Diplosphaera colotermitum TAV2, a termite hindgut Verrucomicrobium
Jantiya Isanapong et al.
ISME JOURNAL (2013)
Using Recombinant Lactococci as an Approach to Dissect the Immunomodulating Capacity of Surface Piliation in Probiotic Lactobacillus rhamnosus GG
Ingemar von Ossowski et al.
PLOS ONE (2013)
Extracellular Vesicles Derived from Gut Microbiota, Especially Akkermansia muciniphila, Protect the Progression of Dextran Sulfate Sodium-Induced Colitis
Chil-sung Kang et al.
PLOS ONE (2013)
The restricted metabolism of the obligate organohalide respiring bacterium Dehalobacter restrictus: lessons from tiered functional genomics
Aamani Rupakula et al.
PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2013)
Rhs proteins from diverse bacteria mediate intercellular competition
Sanna Koskiniemi et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2013)
Cross-talk between Akkermansia muciniphila and intestinal epithelium controls diet-induced obesity
Amandine Everard et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2013)
Autotransporter secretion: varying on a theme
Jan Grijpstra et al.
RESEARCH IN MICROBIOLOGY (2013)
Characterization of the SpaCBA Pilus Fibers in the Probiotic Lactobacillus rhamnosus GG
Justus Reunanen et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2012)
Moonlighting is mainstream: Paradigm adjustment required
Shelley D. Copley
BIOESSAYS (2012)
Microbe-Host Interactions: Structure and Role of Gram-Negative Bacterial Porins
Stefania Galdiero et al.
CURRENT PROTEIN & PEPTIDE SCIENCE (2012)
Analysis of Genome Content Evolution in PVC Bacterial Super-Phylum: Assessment of Candidate Genes Associated with Cellular Organization and Lifestyle
Olga K. Kamneva et al.
GENOME BIOLOGY AND EVOLUTION (2012)
Archaeosortases and Exosortases Are Widely Distributed Systems Linking Membrane Transit with Posttranslational Modification
Daniel H. Haft et al.
JOURNAL OF BACTERIOLOGY (2012)
Characterizing Kiwifruit Carbohydrate Utilization in vitro and its Consequences for Human Faecal Microbiota
Douglas I. Rosendale et al.
JOURNAL OF PROTEOME RESEARCH (2012)
The Microbiota of the Gut in Preschool Children With Normal and Excessive Body Weight
Caroline L. J. Karlsson et al.
OBESITY (2012)
Molecular signatures for the PVC clade (Planctomycetes, Verrucomicrobia, Chlamydiae, and Lentisphaerae) of bacteria provide insights into their evolutionary relationships
Radhey S. Gupta et al.
FRONTIERS IN MICROBIOLOGY (2012)
Genomic analysis indicates the presence of an asymmetric bilayer outer membrane in Planctomycetes and Verrucomicrobia
Daan R. Speth et al.
FRONTIERS IN MICROBIOLOGY (2012)
Bacterial Virulence in the Moonlight: Multitasking Bacterial Moonlighting Proteins Are Virulence Determinants in Infectious Disease
Brian Henderson et al.
INFECTION AND IMMUNITY (2011)
Structure and Function of PilQ, a Secretin of the DNA Transporter from the Thermophilic Bacterium Thermus thermophilus HB27
Janin Burkhardt et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2011)
Filter-aided sample preparation with dimethyl labeling to identify and quantify milk fat globule membrane proteins
Jing Lu et al.
JOURNAL OF PROTEOMICS (2011)
Outer membrane proteome and its regulation networks in response to glucose concentration changes in Escherichia coli
Jun-Ning Yang et al.
MOLECULAR BIOSYSTEMS (2011)
SignalP 4.0: discriminating signal peptides from transmembrane regions
Thomas Nordahl Petersen et al.
NATURE METHODS (2011)
Characterisation of proteins extracted from the surface of Salmonella Typhimurium grown under SPI-2-inducing conditions by LC-ESI/MS/MS sequencing
Aileen E. Sherry et al.
PROTEOMICS (2011)
Modulation of mucosal immune response, tolerance, and proliferation in mice colonized by the mucin-degrader Akkermansia muciniphila
Muriel Derrien et al.
FRONTIERS IN MICROBIOLOGY (2011)
Mucolytic Bacteria With Increased Prevalence in IBD Mucosa Augment In Vitro Utilization of Mucin by Other Bacteria
Chin Wen Png et al.
AMERICAN JOURNAL OF GASTROENTEROLOGY (2010)
PSORTb 3.0: improved protein subcellular localization prediction with refined localization subcategories and predictive capabilities for all prokaryotes
Nancy Y. Yu et al.
BIOINFORMATICS (2010)
Mapping the Subcellular Proteome of Shewanella oneidensis MR-1 using Sarkosyl-Based Fractionation and LC-MS/MS Protein Identification
Roslyn N. Brown et al.
JOURNAL OF PROTEOME RESEARCH (2010)
The Compartmentalized Bacteria of the Planctomycetes-Verrucomicrobia-Chlamydiae Superphylum Have Membrane Coat-Like Proteins
Rachel Santarella-Mellwig et al.
PLOS BIOLOGY (2010)
Biogenesis of Outer Membranes in Gram-Negative Bacteria
Hajime Tokuda
BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY (2009)
Evolutionary diversification of an ancient gene family (rhs) through C-terminal displacement
Andrew P. Jackson et al.
BMC GENOMICS (2009)
Phylum Verrucomicrobia representatives share a compartmentalized cell plan with members of bacterial phylum Planctomycetes
Kuo-Chang Lee et al.
BMC MICROBIOLOGY (2009)
Protein secretion systems in bacterial-host associations, and their description in the Gene Ontology
Tsai-Tien Tseng et al.
BMC MICROBIOLOGY (2009)
Evaluation of procedures for outer membrane isolation from Campylobacter jejuni
Rhonda I. Hobb et al.
MICROBIOLOGY-SGM (2009)
Physiological adaptation of Corynebacterium glutamicum to benzoate as alternative carbon source - a membrane proteome-centric view
Ute Haussmann et al.
PROTEOMICS (2009)
Type IV pilli: paradoxes in form and function
Lisa Craig et al.
CURRENT OPINION IN STRUCTURAL BIOLOGY (2008)
Comparison of the membrane subproteomes during growth of a new Pseudomonas strain on lysogeny broth medium, glucose, and phenol
Dimitrios G. Papasotiriou et al.
JOURNAL OF PROTEOME RESEARCH (2008)
TIGRFAMs and Genome Properties: tools for the assignment of molecular function and biological process in prokaryotic genomes
Jeremy D. Selengut et al.
NUCLEIC ACIDS RESEARCH (2007)
Exopolysaccharide-associated protein sorting in environmental organisms: the PEP-CTERM/EpsH system. Application of a novel phylogenetic profiling heuristic
Daniel H. Haft et al.
BMC BIOLOGY (2006)
The Planctomycetes, Verrucomicrobia, Chlamydiae and sister phyla comprise a superphylum with biotechnological and medical relevance
Michael Wagner et al.
CURRENT OPINION IN BIOTECHNOLOGY (2006)
Non-classical protein secretion in bacteria
JD Bendtsen et al.
BMC MICROBIOLOGY (2005)
YaeT (Omp85) affects the assembly of lipid-dependent and lipid-independent outer membrane proteins of Escherichia coli
J Werner et al.
MOLECULAR MICROBIOLOGY (2005)
Akkermansia muciniphila gen. nov., sp nov., a human intestinal mucin-degrading bacterium
M Derrien et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2004)
BOMP:: a program to predict integral β-barrel outer membrane proteins encoded within genomes of Gram-negative bacteria
FS Berven et al.
NUCLEIC ACIDS RESEARCH (2004)
Identification of an outer membrane protein required for the transport of lipopolysaccharide to the bacterial cell surface
MP Bos et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2004)
Proteomic analysis of the sarcosine-insoluble outer membrane fraction of the bacterial pathogen Bartonella henselae
TA Rhomberg et al.
PROTEOMICS (2004)
Predicting subcellular localization of proteins for Gram-negative bacteria by support vector machines based on n-peptide compositions
CS Yu et al.
PROTEIN SCIENCE (2004)
The versatile β-barrel membrane protein
WC Wimley
CURRENT OPINION IN STRUCTURAL BIOLOGY (2003)
Prediction of lipoprotein signal peptides in Gram-negative bacteria
AS Juncker et al.
PROTEIN SCIENCE (2003)
Predicting transmembrane protein topology with a hidden Markov model: Application to complete genomes
A Krogh et al.
JOURNAL OF MOLECULAR BIOLOGY (2001)
Requirement of the Pseudomonas aeruginosa tonB gene for high-affinity iron acquisition and infection
H Takase et al.
INFECTION AND IMMUNITY (2000)
Proteomic analysis of the Escherichia coli outer membrane
MP Molloy et al.
EUROPEAN JOURNAL OF BIOCHEMISTRY (2000)