Related references
Note: Only part of the references are listed.Identification of key taxa that favor intestinal colonization of Clostridium difficile in an adult Chinese population
Silan Gu et al.
MICROBES AND INFECTION (2016)
Human Clostridium difficile infection: altered mucus production and composition
Melinda A. Engevik et al.
AMERICAN JOURNAL OF PHYSIOLOGY-GASTROINTESTINAL AND LIVER PHYSIOLOGY (2015)
Insight into alteration of gut microbiota in Clostridium difficile infection and asymptomatic C. difficile colonization
Lihua Zhang et al.
ANAEROBE (2015)
Analysis of Bacterial Communities during Clostridium difficile Infection in the Mouse
Ekaterina G. Semenyuk et al.
INFECTION AND IMMUNITY (2015)
Dynamics and Establishment of Clostridium difficile Infection in the Murine Gastrointestinal Tract
Mark J. Koenigsknecht et al.
INFECTION AND IMMUNITY (2015)
An in vitro culture model to study the dynamics of colonic microbiota in Syrian golden hamsters and their susceptibility to infection with Clostridium difficile
Matthew Miezeiewski et al.
ISME JOURNAL (2015)
Prevalence and risk factors of Clostridium difficile infection in patients hospitalized for flare of inflammatory bowel disease: A retrospective assessment
Helene Regnault et al.
DIGESTIVE AND LIVER DISEASE (2014)
Proton pump inhibitors induce changes in colonocyte gene expression that may affect Clostridium difficile infection
John P. Hegarty et al.
SURGERY (2014)
Antibiotic-induced shifts in the mouse gut microbiome and metabolome increase susceptibility to Clostridium difficile infection
Casey M. Theriot et al.
NATURE COMMUNICATIONS (2014)
Structural and functional changes in the gut microbiota associated to Clostridium difficile infection
Ana E. Perez-Cobas et al.
FRONTIERS IN MICROBIOLOGY (2014)
Murine models to study Clostridium difficile infection and transmission
Trevor D. Lawley et al.
ANAEROBE (2013)
Intestinal Dysbiosis and Depletion of Butyrogenic Bacteria in Clostridium difficile Infection and Nosocomial Diarrhea
Vijay C. Antharam et al.
JOURNAL OF CLINICAL MICROBIOLOGY (2013)
Differential abundance analysis for microbial marker-gene surveys
Joseph N. Paulson et al.
NATURE METHODS (2013)
UPARSE: highly accurate OTU sequences from microbial amplicon reads
Robert C. Edgar
NATURE METHODS (2013)
Gut Microbiota Patterns Associated with Colonization of Different Clostridium difficile Ribotypes
Jure Skraban et al.
PLOS ONE (2013)
Clostridium difficile Carriage in Healthy Infants in the Community: A Potential Reservoir for Pathogenic Strains
Clotilde Rousseau et al.
CLINICAL INFECTIOUS DISEASES (2012)
Clostridium difficile Carriage in Elderly Subjects and Associated Changes in the Intestinal Microbiota
Mary C. Rea et al.
JOURNAL OF CLINICAL MICROBIOLOGY (2012)
Succession in the Gut Microbiome following Antibiotic and Antibody Therapies for Clostridium difficile
Gregory L. Peterfreund et al.
PLOS ONE (2012)
Microbial Co-occurrence Relationships in the Human Microbiome
Karoline Faust et al.
PLOS COMPUTATIONAL BIOLOGY (2012)
Mechanisms controlling pathogen colonization of the gut
Baerbel Stecher et al.
CURRENT OPINION IN MICROBIOLOGY (2011)
Clostridium difficile Colonization in Early Infancy Is Accompanied by Changes in Intestinal Microbiota Composition
Clotilde Rousseau et al.
JOURNAL OF CLINICAL MICROBIOLOGY (2011)
The Genome of Akkermansia muciniphila, a Dedicated Intestinal Mucin Degrader, and Its Use in Exploring Intestinal Metagenomes
Mark W. J. van Passel et al.
PLOS ONE (2011)
Global patterns of 16S rRNA diversity at a depth of millions of sequences per sample
J. Gregory Caporaso et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2011)
Metagenomic biomarker discovery and explanation
Nicola Segata et al.
GENOME BIOLOGY (2011)
The interplay between microbiome dynamics and pathogen dynamics in a murine model of Clostridium difficile infection
Angela E. Reeves et al.
GUT MICROBES (2011)
Search and clustering orders of magnitude faster than BLAST
Robert C. Edgar
BIOINFORMATICS (2010)
ITS as an environmental DNA barcode for fungi: an in silico approach reveals potential PCR biases
Eva Bellemain et al.
BMC MICROBIOLOGY (2010)
QIIME allows analysis of high-throughput community sequencing data
J. Gregory Caporaso et al.
NATURE METHODS (2010)
Potential of Penicillium Species in the Bioremediation Field
Ana Lucia Leitao
INTERNATIONAL JOURNAL OF ENVIRONMENTAL RESEARCH AND PUBLIC HEALTH (2009)
The gut microbiota shapes intestinal immune responses during health and disease
June L. Round et al.
NATURE REVIEWS IMMUNOLOGY (2009)
The mucin degrader Akkermansia muciniphila is an abundant resident of the human intestinal tract
Muriel Derrien et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2008)
Bacteroides: the good, the bad, and the nitty-gritty
Hannah M. Wexler
CLINICAL MICROBIOLOGY REVIEWS (2007)
The short chain fatty acid, butyrate, stimulates MUC2 mucin production in the human colon cancer cell line, LS174T
Hajime Hatayama et al.
BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS (2007)
Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB
T. Z. DeSantis et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2006)
Akkermansia muciniphila gen. nov., sp nov., a human intestinal mucin-degrading bacterium
M Derrien et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2004)
Share Paper
