4.4 Article

Diversity of antimicrobial resistance, stress resistance, and virulence factors of Salmonella, Shiga toxin-producing Escherichia coli, and Listeria monocytogenes from produce, spices, and tree nuts by whole genome sequencing

Related references

Note: Only part of the references are listed.
Article Multidisciplinary Sciences

AMRFinderPlus and the Reference Gene Catalog facilitate examination of the genomic links among antimicrobial resistance, stress response, and virulence

Michael Feldgarden et al.

Summary: With the advancement of technology, in silico approaches to assessing AMR gene content have become possible. NCBI has developed a comprehensive AMR gene database and AMR gene detection tool, expanding the Reference Gene Catalog and releasing AMRFinderPlus to provide a more accurate means of identifying AMR genes and determining their relationship with phenotypes.

SCIENTIFIC REPORTS (2021)

Review Microbiology

Transcriptional Regulation of the Multiple Resistance Mechanisms in Salmonella-A Review

Michal Wojcicki et al.

Summary: The widespread use of antibiotics has led to the development of multidrug resistance in many bacterial strains, including Salmonella. Salmonella, a common pathogen causing intoxication from contaminated food and water, is pharmacologically treated with antibiotics like fluoroquinolones, ceftriaxone, and azithromycin. Understanding the molecular mechanisms behind antibiotic resistance in Salmonella is essential for choosing effective treatment and addressing the significant global concern of increasing antibiotic resistance.

PATHOGENS (2021)

Article Microbiology

Whole-Genome Sequencing for Drug Resistance Profile Prediction in Mycobacterium tuberculosis

Sebastian M. Gygli et al.

ANTIMICROBIAL AGENTS AND CHEMOTHERAPY (2019)

Article Infectious Diseases

Molecular Detection Of Multidrug-Resistant Salmonella Isolated From Livestock Production Systems In South Africa

Thobeka P. Mthembu et al.

INFECTION AND DRUG RESISTANCE (2019)

Article Environmental Sciences

Effect of Dairy Manure Storage Conditions on the Survival of E-coli O157:H7 and Listeria

S. Biswas et al.

JOURNAL OF ENVIRONMENTAL QUALITY (2018)

Article Public, Environmental & Occupational Health

The role of whole genome sequencing in monitoring antimicrobial resistance: A biosafety and public health priority in the Arabian Peninsula

Majed F. Alghoribi et al.

JOURNAL OF INFECTION AND PUBLIC HEALTH (2018)

Article Food Science & Technology

Survival of Listeria monocytogenes with different antibiotic resistance patterns to food-associated stresses

Norton Komora et al.

INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY (2017)

Article Immunology

High Prevalence of Virulence Genes in Specific Genotypes of Atypical Enteropathogenic Escherichia coli

Yanmei Xu et al.

FRONTIERS IN CELLULAR AND INFECTION MICROBIOLOGY (2017)

Review Food Science & Technology

Influence of Water Activity on Thermal Resistance of Microorganisms in Low-Moisture Foods: A Review

Roopesh M. Syamaladevi et al.

COMPREHENSIVE REVIEWS IN FOOD SCIENCE AND FOOD SAFETY (2016)

Article Medicine, Research & Experimental

β-Lactams and β-Lactamase Inhibitors: An Overview

Karen Bush et al.

COLD SPRING HARBOR PERSPECTIVES IN MEDICINE (2016)

Article Infectious Diseases

OXY-2-15, a novel variant showing increased ceftazidime hydrolytic activity

R. H. T. Nijhuis et al.

JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY (2015)

Review Biotechnology & Applied Microbiology

Quaternary Ammonium Biocides: Efficacy in Application

Charles P. Gerba

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2015)

Article Biochemistry & Molecular Biology

PAIDB v2.0: exploration and analysis of pathogenicity and resistance islands

Sung Ho Yoon et al.

NUCLEIC ACIDS RESEARCH (2015)

Review Genetics & Heredity

Whole-genome sequencing targets drug-resistant bacterial infections

N. V. Punina et al.

HUMAN GENOMICS (2015)

Article Computer Science, Artificial Intelligence

CFSAN SNP Pipeline: an automated method for constructing SNP matrices from next-generation sequence data

Steve Davis et al.

PEERJ COMPUTER SCIENCE (2015)

Article Biochemistry & Molecular Biology

Predicting the virulence of MRSA from its genome sequence

Maisem Laabei et al.

GENOME RESEARCH (2014)

Article Multidisciplinary Sciences

The Shared Antibiotic Resistome of Soil Bacteria and Human Pathogens

Kevin J. Forsberg et al.

SCIENCE (2012)

Editorial Material Microbiology

Routine Use of Microbial Whole Genome Sequencing in Diagnostic and Public Health Microbiology

Claudio U. Koeser et al.

PLOS PATHOGENS (2012)

Article Multidisciplinary Sciences

Global trends in emerging infectious diseases

Kate E. Jones et al.

NATURE (2008)

Review Microbiology

Regulation of virulence genes in Listeria

J Kreft et al.

INTERNATIONAL JOURNAL OF MEDICAL MICROBIOLOGY (2001)

Article Biotechnology & Applied Microbiology

Survival of Salmonella in peanut butter and peanut butter spread

SL Burnett et al.

JOURNAL OF APPLIED MICROBIOLOGY (2000)