3.9 Article

Complete genome sequence of Methanospirillum hungatei type strain JF1

Journal

STANDARDS IN GENOMIC SCIENCES
Volume 11, Issue -, Pages -

Publisher

BMC
DOI: 10.1186/s40793-015-0124-8

Keywords

Methanomicrobiales; Anaerobic; Motile; Methangenic archaea; Hydrogen; Formate; Syntrophic partnerships

Funding

  1. US Department of Energy Office of Science Biological and Environmental Research Program
  2. US Department of Energy from the Chemical Sciences, Geosciences and Biosciences Division, Office of Basic Energy Sciences [DE-FG02-96ER20214]
  3. Department of Energy [DE-FG03-86ER13498]
  4. UCLA-DOE Institute of Genomics and Proteomics Grant [DE-FC02-02ER63421]
  5. National Science Foundation [NSF 1244566]
  6. Direct For Biological Sciences [1338135] Funding Source: National Science Foundation
  7. Div Of Biological Infrastructure [1338135] Funding Source: National Science Foundation
  8. U.S. Department of Energy (DOE) [DE-FG02-96ER20214] Funding Source: U.S. Department of Energy (DOE)

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Methanospirillum hungatei strain JF1 (DSM 864) is a methane-producing archaeon and is the type species of the genus Methanospirillum, which belongs to the family Methanospirillaceae within the order Methanomicrobiales. Its genome was selected for sequencing due to its ability to utilize hydrogen and carbon dioxide and/or formate as a sole source of energy. Ecologically, M. hungatei functions as the hydrogen- and/or formate-using partner with many species of syntrophic bacteria. Its morphology is distinct from other methanogens with the ability to form long chains of cells (up to 100 mu m in length), which are enclosed within a sheath-like structure, and terminal cells with polar flagella. The genome of M. hungatei strain JF1 is the first completely sequenced genome of the family Methanospirillaceae, and it has a circular genome of 3,544,738 bp containing 3,239 protein coding and 68 RNA genes. The large genome of M. hungatei JF1 suggests the presence of unrecognized biochemical/physiological properties that likely extend to the other Methanospirillaceae and include the ability to form the unusual sheath-like structure and to successfully interact with syntrophic bacteria.

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