Related references
Note: Only part of the references are listed.Maternal vaginal microbiome composition does not affect development of the infant gut microbiome in early life
Scott J. J. Dos Santos et al.
FRONTIERS IN CELLULAR AND INFECTION MICROBIOLOGY (2023)
Expanding known viral diversity in the healthy infant gut
Shiraz A. Shah et al.
NATURE MICROBIOLOGY (2023)
cpn60 barcode sequences accurately identify newly defined genera within the Lactobacillaceae
Ishika Shukla et al.
CANADIAN JOURNAL OF MICROBIOLOGY (2022)
Vaginal microbiota associated with oncogenic HPV in a cohort of HPV-vaccinated women living with HIV
Elisabeth McClymont et al.
INTERNATIONAL JOURNAL OF STD & AIDS (2022)
Alkalihalobacterium elongatum gen. nov. sp. nov.: An Antibiotic-Producing Bacterium Isolated From Lonar Lake and Reclassification of the Genus Alkalihalobacillus Into Seven Novel Genera
Amaraja Joshi et al.
FRONTIERS IN MICROBIOLOGY (2021)
CaptureSeq: Hybridization-Based Enrichment of cpn60 Gene Fragments Reveals the Community Structures of Synthetic and Natural Microbial Ecosystems
Matthew G. Links et al.
MICROORGANISMS (2021)
Different and diverse anaerobic microbiota were seen in women living with HIV with unsuppressed HIV viral load and in women with recurrent bacterial vaginosis: a cohort study
C. Elwood et al.
BJOG-AN INTERNATIONAL JOURNAL OF OBSTETRICS AND GYNAECOLOGY (2020)
Evaluation of variant calling for cpn60 barcode sequence-based microbiome profiling
Sarah J. Vancuren et al.
PLOS ONE (2020)
Lentilactobacillus kribbianus sp. nov., isolated from the small intestine of a mini pig
Lu Bai et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2020)
MitoZ: a toolkit for animal mitochondrial genome assembly, annotation and visualization
Guanliang Meng et al.
NUCLEIC ACIDS RESEARCH (2019)
Update on cpnDB: a reference database of chaperonin sequences
Sarah J. Vancuren et al.
DATABASE-THE JOURNAL OF BIOLOGICAL DATABASES AND CURATION (2019)
Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2
Evan Bolyen et al.
NATURE BIOTECHNOLOGY (2019)
Identification of Brachyspira species by cpn60 universal target sequencing is superior to NADH oxidase gene sequencing
Judith Rohde et al.
VETERINARY MICROBIOLOGY (2019)
Automated high throughput animal CO1 metabarcode classification
Teresita M. Porter et al.
SCIENTIFIC REPORTS (2018)
Optimizing taxonomic classification of marker-gene amplicon sequences with QIIME 2′s q2-feature-classifier plugin
Nicholas A. Bokulich et al.
MICROBIOME (2018)
Mesosutterella multiformis gen. nov., sp. nov., a member of the family Sutterellaceae and Sutterella megalosphaeroides sp. nov., isolated from human faeces
Mitsuo Sakamoto et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2018)
Size-variable zone in V3 region of 16S rRNA
Francisco Vargas-Albores et al.
RNA BIOLOGY (2017)
AN RBCL REFERENCE LIBRARY TO AID IN THE IDENTIFICATION OF PLANT SPECIES MIXTURES BY DN A METABARCODING
Karen L. Bell et al.
APPLICATIONS IN PLANT SCIENCES (2017)
Quantitative molecular diagnostic assays of grain washes for Claviceps purpurea are correlated with visual determinations of ergot contamination
Alexia Comte et al.
PLOS ONE (2017)
Comparative Genomics of cpn60-Defined Enterococcus hirae Ecotypes and Relationship of Gene Content Differences to Competitive Fitness
Isha Katyal et al.
MICROBIAL ECOLOGY (2016)
ETE 3: Reconstruction, Analysis, and Visualization of Phylogenomic Data
Jaime Huerta-Cepas et al.
MOLECULAR BIOLOGY AND EVOLUTION (2016)
Gardnerella vaginalis Subgroups Defined by cpn60 Sequencing and Sialidase Activity in Isolates from Canada, Belgium and Kenya
John J. Schellenberg et al.
PLOS ONE (2016)
A Study of the Infant Nasal Microbiome Development over the First Year of Life and in Relation to Their Primary Adult Caregivers Using cpn60 Universal Target (UT) as a Phylogenetic Marker
Shelley W. Peterson et al.
PLOS ONE (2016)
DNA Barcoding for Efficient Species- and Pathovar-Level Identification of the Quarantine Plant Pathogen Xanthomonas
Qian Tian et al.
PLOS ONE (2016)
Molecular characterization of anaerobic digester microbial communities identifies microorganisms that correlate to reactor performance
Jennifer R. Town et al.
BIORESOURCE TECHNOLOGY (2014)
Fecal microbial diversity and putative function in captive western lowland gorillas (Gorilla gorilla gorilla), common chimpanzees (Pan troglodytes), Hamadryas baboons (Papio hamadryas) and binturongs (Arctictis binturong)
Erin A. McKenney et al.
INTEGRATIVE ZOOLOGY (2014)
Simultaneous profiling of seed-associated bacteria and fungi reveals antagonistic interactions between microorganisms within a shared epiphytic microbiome on Triticum and Brassica seeds
Matthew G. Links et al.
NEW PHYTOLOGIST (2014)
Characterization of the Fecal Microbiota of Pigs before and after Inoculation with Brachyspira hampsonii''
Matheus O. Costa et al.
PLOS ONE (2014)
Characterization of the Upper Respiratory Tract Microbiomes of Patients with Pandemic H1N1 Influenza
Bonnie Chaban et al.
PLOS ONE (2013)
Accurate, Rapid Taxonomic Classification of Fungal Large-Subunit rRNA Genes
Kuan-Liang Liu et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2012)
Impact of training sets on classification of high-throughput bacterial 16s rRNA gene surveys
Jeffrey J. Werner et al.
ISME JOURNAL (2012)
Resolution and Characterization of Distinct cpn60-Based Subgroups of Gardnerella vaginalis in the Vaginal Microbiota
Teenus Paramel Jayaprakash et al.
PLOS ONE (2012)
The Chaperonin-60 Universal Target Is a Barcode for Bacteria That Enables De Novo Assembly of Metagenomic Sequence Data
Matthew G. Links et al.
PLOS ONE (2012)
Predicting relatedness of bacterial genomes using the chaperonin-60 universal target (cpn60 UT): Application to Thermoanaerobacter species
Tobin J. Verbeke et al.
SYSTEMATIC AND APPLIED MICROBIOLOGY (2011)
Pyrosequencing of the Chaperonin-60 Universal Target as a Tool for Determining Microbial Community Composition
John Schellenberg et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2009)
Development of cpn60-Based Real-Time Quantitative PCR Assays for the Detection of 14 Campylobacter Species and Application to Screening of Canine Fecal Samples
Bonnie Chaban et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2009)
Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy
Qiong Wang et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2007)
Molecular characterization of microbial communities in Canadian pulp and paper activated sludge and quantification of a novel Thiothrix eikelboomii-like bulking filament
Tim J. Dumonceaux et al.
CANADIAN JOURNAL OF MICROBIOLOGY (2006)
Improved template representation in cpn60 polymerase chain reaction (PCR) product libraries generated from complex templates by application of a specific mixture of PCR primers
JE Hill et al.
ENVIRONMENTAL MICROBIOLOGY (2006)
Biochemical analysis, cpn60 and 16S rDNA sequence data indicate that Streptococcus suis serotypes 32 and 34, isolated from pigs, are Streptococcus orisratti
JE Hill et al.
VETERINARY MICROBIOLOGY (2005)