Related references
Note: Only part of the references are listed.Prevalence of potential nitrogen-fixing, green sulfur bacteria in the skeleton of reef-building coral Isopora palifera
Shan-Hua Yang et al.
LIMNOLOGY AND OCEANOGRAPHY (2016)
A metabarcoding framework for facilitated survey of endolithic phototrophs with tufA
Thomas Sauvage et al.
BMC ECOLOGY (2016)
The three steps of the carbonate biogenic dissolution process by microborers in coral reefs (New Caledonia)
J. S. Grange et al.
ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH (2015)
The coral core microbiome identifies rare bacterial taxa as ubiquitous endosymbionts
Tracy D. Ainsworth et al.
ISME JOURNAL (2015)
Coral-the world's most diverse symbiotic ecosystem
Linda L. Blackall et al.
MOLECULAR ECOLOGY (2015)
Tag jumps illuminated - reducing sequence-to-sample misidentifications in metabarcoding studies
Ida Baerholm Schnell et al.
MOLECULAR ECOLOGY RESOURCES (2015)
Microbiota of the Major South Atlantic Reef Building Coral Mussismilia
Samodha C. Fernando et al.
MICROBIAL ECOLOGY (2015)
The Earth Microbiome project: successes and aspirations
Jack A. Gilbert et al.
BMC BIOLOGY (2014)
Amplicon pyrosequencing reveals spatial and temporal consistency in diazotroph assemblages of the Acropora millepora microbiome
Kimberley A. Lema et al.
ENVIRONMENTAL MICROBIOLOGY (2014)
MORPHOLOGICAL COMPLEXITY, PLASTICITY, AND SPECIES DIAGNOSABILITY IN THE APPLICATION OF OLD SPECIES NAMES IN DNA-BASED TAXONOMIES
Heroen Verbruggen
JOURNAL OF PHYCOLOGY (2014)
Bacterial dynamics within the mucus, tissue and skeleton of the coral Porites lutea during different seasons
Jie Li et al.
SCIENTIFIC REPORTS (2014)
Ocean acidification and warming scenarios increase microbioerosion of coral skeletons
Catalina Reyes-Nivia et al.
GLOBAL CHANGE BIOLOGY (2013)
Evaluation of general 16S ribosomal RNA gene PCR primers for classical and next-generation sequencing-based diversity studies
Anna Klindworth et al.
NUCLEIC ACIDS RESEARCH (2013)
Simultaneous Amplicon Sequencing to Explore Co-Occurrence Patterns of Bacterial, Archaeal and Eukaryotic Microorganisms in Rumen Microbial Communities
Sandra Kittelmann et al.
PLOS ONE (2013)
Geneious Basic: An integrated and extendable desktop software platform for the organization and analysis of sequence data
Matthew Kearse et al.
BIOINFORMATICS (2012)
Cost-effective, high-throughput DNA sequencing libraries for multiplexed target capture
Nadin Rohland et al.
GENOME RESEARCH (2012)
Towards next-generation biodiversity assessment using DNA metabarcoding
Pierre Taberlet et al.
MOLECULAR ECOLOGY (2012)
phytools: an R package for phylogenetic comparative biology (and other things)
Liam J. Revell
METHODS IN ECOLOGY AND EVOLUTION (2012)
Quality control and preprocessing of metagenomic datasets
Robert Schmieder et al.
BIOINFORMATICS (2011)
FLASH: fast length adjustment of short reads to improve genome assemblies
Tanja Magoc et al.
BIOINFORMATICS (2011)
Genotypic diversity and distribution of Ostreobium quekettii within scleractinian corals
Eldad Gutner-Hoch et al.
CORAL REEFS (2011)
Boring algae
Heroen Verbruggen et al.
CURRENT BIOLOGY (2011)
Basin-scale distribution patterns of photosynthetic picoeukaryotes along an Atlantic Meridional Transect
Amy R. Kirkham et al.
ENVIRONMENTAL MICROBIOLOGY (2011)
Endolithic chlorophyll d-containing phototrophs
Lars Behrendt et al.
ISME JOURNAL (2011)
PyNAST: a flexible tool for aligning sequences to a template alignment
J. Gregory Caporaso et al.
BIOINFORMATICS (2010)
QIIME allows analysis of high-throughput community sequencing data
J. Gregory Caporaso et al.
NATURE METHODS (2010)
PhyloBayes 3: a Bayesian software package for phylogenetic reconstruction and molecular dating
Nicolas Lartillot et al.
BIOINFORMATICS (2009)
PHYLOGENETIC ANALYSIS OF PSEUDOCHLORODESMIS STRAINS REVEALS CRYPTIC DIVERSITY ABOVE THE FAMILY LEVEL IN THE SIPHONOUS GREEN ALGAE (BRYOPSIDALES, CHLOROPHYTA)
Heroen Verbruggen et al.
JOURNAL OF PHYCOLOGY (2009)
Evaluating high-throughput sequencing as a method for metagenomic analysis of nematode diversity
Dorota L. Porazinska et al.
MOLECULAR ECOLOGY RESOURCES (2009)
A multi-locus time-calibrated phylogeny of the siphonous green algae
Heroen Verbruggen et al.
MOLECULAR PHYLOGENETICS AND EVOLUTION (2009)
Record of microendoliths in different facies of the Upper Ordovician in the Cincinnati Arch region USA: The early history of light-related microendolithic zonation
Klaus Vogel et al.
PALAEOGEOGRAPHY PALAEOCLIMATOLOGY PALAEOECOLOGY (2009)
delta C-13 and delta N-15 values in reef corals Porites lutea and P-cylindrica and in their epilithic and endolithic algae
Eduard A. Titlyanov et al.
MARINE BIOLOGY (2008)
Dissolution of dead corals by euendolithic microorganisms across the northern great barrier reef (Australia)
Tribollet Aline
MICROBIAL ECOLOGY (2008)
Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy
Qiong Wang et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2007)
Dissecting biological dark matter with single-cell genetic analysis of rare and uncultivated TM7 microbes from the human mouth
Yann Marcy et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2007)
The role of microorganisms in coral health, disease and evolution
Eugene Rosenberg et al.
NATURE REVIEWS MICROBIOLOGY (2007)
RAxML-VI-HPC: Maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models
Alexandros Stamatakis
BIOINFORMATICS (2006)
The role of zooxanthellae in the thermal tolerance of corals: a 'nugget of hope' for coral reefs in an era of climate change
Ray Berkelmans et al.
PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2006)
Identification of conserved regions in the plastid genome: implications for DNA barcoding and biological function
Gernot G. Presting
CANADIAN JOURNAL OF BOTANY-REVUE CANADIENNE DE BOTANIQUE (2006)
PCR-induced sequence artifacts and bias: Insights from comparison of two 16S rRNA clone libraries constructed from the same sample
SG Acinas et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2005)
Structural characterization of the terminal domains of linear plasmid-like DNA from the green alga Ernodesmis (Chlorophyta)
JW La Claire et al.
JOURNAL OF PHYCOLOGY (2004)
The evolution of modern corals and their early history
GD Stanley
EARTH-SCIENCE REVIEWS (2003)
The uncultured microbial majority
MS Rappe et al.
ANNUAL REVIEW OF MICROBIOLOGY (2003)
MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform
K Katoh et al.
NUCLEIC ACIDS RESEARCH (2002)
Endolithic algae: an alternative source of photoassimilates during coral bleaching
M Fine et al.
PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2002)
The challenge of Siphonous Green Algae
PS Vroom et al.
AMERICAN SCIENTIST (2001)