Related references
Note: Only part of the references are listed.Estimating the Ages of Selection Signals from Different Epochs in Human History
Shigeki Nakagome et al.
MOLECULAR BIOLOGY AND EVOLUTION (2016)
Ancient mitochondrial DNA provides high-resolution time scale of the peopling of the Americas
Bastien Llamas et al.
SCIENCE ADVANCES (2016)
A global reference for human genetic variation
David M. Altshuler et al.
NATURE (2015)
The Genotype-Tissue Expression (GTEx) pilot analysis: Multitissue gene regulation in humans
Kristin G. Ardlie et al.
SCIENCE (2015)
The ins and outs of MHC class II-mediated antigen processing and presentation
Paul A. Roche et al.
NATURE REVIEWS IMMUNOLOGY (2015)
HLA alleles associated with the adaptive immune response to smallpox vaccine: a replication study
Inna G. Ovsyannikova et al.
HUMAN GENETICS (2014)
The genome of a Late Pleistocene human from a Clovis burial site in western Montana
Morten Rasmussen et al.
NATURE (2014)
Patterns of Admixture and Population Structure in Native Populations of Northwest North America
Paul Verdu et al.
PLOS GENETICS (2014)
RFMix: A Discriminative Modeling Approach for Rapid and Robust Local-Ancestry Inference
Brian K. Maples et al.
AMERICAN JOURNAL OF HUMAN GENETICS (2013)
Long Runs of Homozygosity Are Enriched for Deleterious Variation
Zachary A. Szpiech et al.
AMERICAN JOURNAL OF HUMAN GENETICS (2013)
SLiM: Simulating Evolution with Selection and Linkage
Philipp W. Messer
GENETICS (2013)
Genetic Signatures Reveal High-Altitude Adaptation in a Set of Ethiopian Populations
Emilia Huerta-Sanchez et al.
MOLECULAR BIOLOGY AND EVOLUTION (2013)
Ancient DNA Analysis of Mid-Holocene Individuals from the Northwest Coast of North America Reveals Different Evolutionary Paths for Mitogenomes
Yinqiu Cui et al.
PLOS ONE (2013)
Ligation Bias in Illumina Next-Generation DNA Libraries: Implications for Sequencing Ancient Genomes
Andaine Seguin-Orlando et al.
PLOS ONE (2013)
Reconstructing Native American Migrations from Whole-Genome and Whole-Exome Data
Simon Gravel et al.
PLOS GENETICS (2013)
Robust Demographic Inference from Genomic and SNP Data
Laurent Excoffier et al.
PLOS GENETICS (2013)
An integrated map of genetic variation from 1,092 human genomes
David M. Altshuler et al.
NATURE (2012)
SNP Calling, Genotype Calling, and Sample Allele Frequency Estimation from New-Generation Sequencing Data
Rasmus Nielsen et al.
PLOS ONE (2012)
Estimates of Genetic Differentiation Measured by FST Do Not Necessarily Require Large Sample Sizes When Using Many SNP Markers
Eva-Maria Willing et al.
PLOS ONE (2012)
Inference of Population Splits and Mixtures from Genome-Wide Allele Frequency Data
Joseph K. Pickrell et al.
PLOS GENETICS (2012)
ContEst: estimating cross-contamination of human samples in next-generation sequencing data
Kristian Cibulskis et al.
BIOINFORMATICS (2011)
Human Leukocyte Antigen Genotypes in the Genetic Control of Adaptive Immune Responses to Smallpox Vaccine
Inna G. Ovsyannikova et al.
JOURNAL OF INFECTIOUS DISEASES (2011)
Demographic history and rare allele sharing among human populations
Simon Gravel et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2011)
Native Americans experienced a strong population bottleneck coincident with European contact
Brendan D. O'Fallon et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2011)
Signatures of Environmental Genetic Adaptation Pinpoint Pathogens as the Main Selective Pressure through Human Evolution
Matteo Fumagalli et al.
PLOS GENETICS (2011)
Smallpox and American Indians Revisited
James C. Riley
JOURNAL OF THE HISTORY OF MEDICINE AND ALLIED SCIENCES (2010)
Ancient human genome sequence of an extinct Palaeo-Eskimo
Morten Rasmussen et al.
NATURE (2010)
Sequencing of 50 Human Exomes Reveals Adaptation to High Altitude
Xin Yi et al.
SCIENCE (2010)
The Sequence Alignment/Map format and SAMtools
Heng Li et al.
BIOINFORMATICS (2009)
GOrilla: a tool for discovery and visualization of enriched GO terms in ranked gene lists
Eran Eden et al.
BMC BIOINFORMATICS (2009)
Fast model-based estimation of ancestry in unrelated individuals
David H. Alexander et al.
GENOME RESEARCH (2009)
Balancing selection and heterogeneity across the classical human leukocyte antigen loci: A meta-analytic review of 497 population studies
Owen D. Solberg et al.
HUMAN IMMUNOLOGY (2008)
A systematic assessment of MHC class II peptide binding predictions and evaluation of a consensus approach
Peng Wang et al.
PLOS COMPUTATIONAL BIOLOGY (2008)
Population genetics of polymorphism and divergence under fluctuating selection
Emilia Huerta-Sanchez et al.
GENETICS (2008)
Rapid and accurate haplotype phasing and missing-data inference for whole-genome association studies by use of localized haplotype clustering
Sharon R. Browning et al.
AMERICAN JOURNAL OF HUMAN GENETICS (2007)
Patterns of damage in genomic DNA sequences from a Neandertal
Adrian W. Briggs et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2007)
Beringian Standstill and Spread of Native American Founders
Erika Tamm et al.
PLOS ONE (2007)
Ancient polymorphism and functional variation in the primate MHC-DQA1 5′ cis-regulatory region
Dagan A. Loisel et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2006)
Importance of HLA-DQ and HLA-DP polymorphisms in cytokine responses to naturally processed HLA-DR-derived
Inna G. Ovsyannikova et al.
VACCINE (2006)
MHC class II proteins and disease: a structural perspective
EY Jones et al.
NATURE REVIEWS IMMUNOLOGY (2006)
Aspartic acid homozygosity at codon 57 of HLA-DQ β is associated with susceptibility to pulmonary tuberculosis in Cambodia
JC Delgado et al.
JOURNAL OF IMMUNOLOGY (2006)
Association of HLA-DR and HLA-DQ genes with susceptibility to pulmonary tuberculosis in Koreans: Preliminary evidence of associations with drug resistance, disease severity, and disease recurrence
HS Kim et al.
HUMAN IMMUNOLOGY (2005)
A note on exact tests of Hardy-Weinberg equilibrium
JE Wigginton et al.
AMERICAN JOURNAL OF HUMAN GENETICS (2005)
Smallpox and the Native American
KB Patterson et al.
AMERICAN JOURNAL OF THE MEDICAL SCIENCES (2002)