4.6 Article

Selection for Protein Kinetic Stability Connects Denaturation Temperatures to Organismal Temperatures and Provides Clues to Archaean Life

Related references

Note: Only part of the references are listed.
Article Biochemistry & Molecular Biology

Phenotypic comparisons of consensus variants versus laboratory resurrections of Precambrian proteins

Valeria A. Risso et al.

PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS (2014)

Article Biochemistry & Molecular Biology

Thermodynamic System Drift in Protein Evolution

Kathryn M. Hart et al.

PLOS BIOLOGY (2014)

Article Biochemistry & Molecular Biology

Structure- and sequence-analysis inspired engineering of proteins for enhanced thermostability

Hein J. Wijma et al.

CURRENT OPINION IN STRUCTURAL BIOLOGY (2013)

Article Biochemistry & Molecular Biology

GroEL/ES Buffering and Compensatory Mutations Promote Protein Evolution by Stabilizing Folding Intermediates

Kirsten T. Wyganowski et al.

JOURNAL OF MOLECULAR BIOLOGY (2013)

Article Chemistry, Multidisciplinary

Membrane Proteins Can Have High Kinetic Stability

Robert E. Jefferson et al.

JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2013)

Article Chemistry, Multidisciplinary

Hyperstability and Substrate Promiscuity in Laboratory Resurrections of Precambrian β-Lactamases

Valeria A. Risso et al.

JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2013)

Article Multidisciplinary Sciences

Mechanism of Protein Kinetic Stabilization by Engineered Disulfide Crosslinks

Inmaculada Sanchez-Romero et al.

PLOS ONE (2013)

Article Multidisciplinary Sciences

Experimental evidence for the thermophilicity of ancestral life

Satoshi Akanuma et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2013)

Editorial Material Multidisciplinary Sciences

How Was Early Earth Kept Warm?

James F. Kasting

SCIENCE (2013)

Article Multidisciplinary Sciences

Hydrogen-Nitrogen Greenhouse Warming in Earth's Early Atmosphere

Robin Wordsworth et al.

SCIENCE (2013)

Article Biochemistry & Molecular Biology

Conservation of Protein Structure over Four Billion Years

Alvaro Ingles-Prieto et al.

STRUCTURE (2013)

Article Biochemistry & Molecular Biology

On the Origin and Evolution of Thermophily: Reconstruction of Functional Precambrian Enzymes from Ancestors of Bacillus

Joanne K. Hobbs et al.

MOLECULAR BIOLOGY AND EVOLUTION (2012)

Review Chemistry, Physical

Cooperativity, Local-Nonlocal Coupling, and Nonnative Interactions: Principles of Protein Folding from Coarse-Grained Models

Hue Sun Chan et al.

ANNUAL REVIEW OF PHYSICAL CHEMISTRY, VOL 62 (2011)

Review Cell Biology

Out with the old, in with the new? Comparing methods for measuring protein degradation

Jonathan W. Yewdell et al.

CELL BIOLOGY INTERNATIONAL (2011)

Article Biochemistry & Molecular Biology

Single-molecule paleoenzymology probes the chemistry of resurrected enzymes

Raul Perez-Jimenez et al.

NATURE STRUCTURAL & MOLECULAR BIOLOGY (2011)

Article Multidisciplinary Sciences

Highly Anomalous Energetics of Protein Cold Denaturation Linked to Folding-Unfolding Kinetics

M. Luisa Romero-Romero et al.

PLOS ONE (2011)

Article Biochemistry & Molecular Biology

Role of conformational sampling in computing mutation-induced changes in protein structure and stability

Elizabeth H. Kellogg et al.

PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS (2011)

Article Multidisciplinary Sciences

Proteome Half-Life Dynamics in Living Human Cells

Eran Eden et al.

SCIENCE (2011)

Review Biochemistry & Molecular Biology

Protein kinetic stability

Jose M. Sanchez-Ruiz

BIOPHYSICAL CHEMISTRY (2010)

Article Multidisciplinary Sciences

Insights into protein folding mechanisms from large scale analysis of mutational effects

Athi N. Naganathan et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2010)

Review Biochemistry & Molecular Biology

Stability effects of mutations and protein evolvability

Nobuhiko Tokuriki et al.

CURRENT OPINION IN STRUCTURAL BIOLOGY (2009)

Review Biochemistry & Molecular Biology

Desolvation Barrier Effects Are a Likely Contributor to the Remarkable Diversity in the Folding Rates of Small Proteins

Allison Ferguson et al.

JOURNAL OF MOLECULAR BIOLOGY (2009)

Article Biochemistry & Molecular Biology

Between-Species Variation in the Kinetic Stability of TIM Proteins Linked to Solvation-Barrier Free Energies

Miguel Costas et al.

JOURNAL OF MOLECULAR BIOLOGY (2009)

Article Biochemical Research Methods

Turnover of the Human Proteome: Determination of Protein Intracellular Stability by Dynamic SILAC

Mary K. Doherty et al.

JOURNAL OF PROTEOME RESEARCH (2009)

Article Multidisciplinary Sciences

Oxygen and hydrogen isotope evidence for a temperate climate 3.42 billion years ago

M. T. Hren et al.

NATURE (2009)

Article Biochemistry & Molecular Biology

Assessing computational methods for predicting protein stability upon mutation: good on average but not in the details

Vladimir Potapov et al.

PROTEIN ENGINEERING DESIGN & SELECTION (2009)

Review Biochemistry & Molecular Biology

The cost of DNA bending

Peter L. Privalov et al.

TRENDS IN BIOCHEMICAL SCIENCES (2009)

Article Biochemistry & Molecular Biology

Intense neutral drifts yield robust and evolvable consensus proteins

Shimon Bershtein et al.

JOURNAL OF MOLECULAR BIOLOGY (2008)

Article Multidisciplinary Sciences

Palaeotemperature trend for Precambrian life inferred from resurrected proteins

Eric A. Gaucher et al.

NATURE (2008)

Article Biochemistry & Molecular Biology

Revisiting the correlation between proteins' thermoresistance and organisms' thermophilicity

Yves Dehouck et al.

PROTEIN ENGINEERING DESIGN & SELECTION (2008)

Article Biochemistry & Molecular Biology

Engineering proteins with tunable thermodynamic and kinetic stabilities

Angel L. Pey et al.

PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS (2008)

Article Multidisciplinary Sciences

Global Protein Stability Profiling in Mammalian Cells

Hsueh-Chi Sherry Yen et al.

SCIENCE (2008)

Article Multidisciplinary Sciences

Identifying the subproteome of kinetically stable proteins via diagonal 2D SDS/PAGE

Ke Xia et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2007)

Article Multidisciplinary Sciences

Protein stability imposes limits on organism complexity and speed of molecular evolution

Konstantin B. Zeldovich et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2007)

Article Biochemistry & Molecular Biology

The stability effects of protein mutations appear to be universally distributed

Nobuhiko Tokuriki et al.

JOURNAL OF MOLECULAR BIOLOGY (2007)

Article Biochemistry & Molecular Biology

Energetics-based protein profiling on a proteomic scale: Identification of proteins resistant to proteolysis

Chiwook Park et al.

JOURNAL OF MOLECULAR BIOLOGY (2007)

Article Biochemistry & Molecular Biology

The conserved active site proline determines the reducing power of Staphylococcus aureus thioredoxin

Goedele Roos et al.

JOURNAL OF MOLECULAR BIOLOGY (2007)

Article Biochemistry & Molecular Biology

Ligand effects on protein thermodynamic stability

Jose M. Sanchez-Ruiz

BIOPHYSICAL CHEMISTRY (2007)

Article Biochemistry & Molecular Biology

Microcalorimetry of biological macromolecules

Peter L. Privalov et al.

BIOPHYSICAL CHEMISTRY (2007)

Article Multidisciplinary Sciences

Robustness-epistasis link shapes the fitness landscape of a randomly drifting protein

Shimon Bershtein et al.

NATURE (2006)

Article Multidisciplinary Sciences

A palaeotemperature curve for the Precambrian oceans based on silicon isotopes in cherts

Francois Robert et al.

NATURE (2006)

Article Biochemistry & Molecular Biology

Point mutations in protein globular domains:: Contributions from function, stability and misfolding

I. E. Sanchez et al.

JOURNAL OF MOLECULAR BIOLOGY (2006)

Article Biochemistry & Molecular Biology

Role of solvation barriers in protein kinetic stability

David Rodriguez-Larrea et al.

JOURNAL OF MOLECULAR BIOLOGY (2006)

Article Biochemical Research Methods

Assessing the accuracy of ancestral protein reconstruction methods

Paul D. Williams et al.

PLOS COMPUTATIONAL BIOLOGY (2006)

Article Biochemistry & Molecular Biology

Protein turnover

Yoshinori Ohsumi

IUBMB LIFE (2006)

Article Multidisciplinary Sciences

Darwinian evolution can follow only very few mutational paths to fitter proteins

DM Weinreich et al.

SCIENCE (2006)

Article Multidisciplinary Sciences

Thermodynamic prediction of protein neutrality

JD Bloom et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2005)

Article Biochemistry & Molecular Biology

Relation between protein stability, evolution and structure, as probed by carboxylic acid mutations

R Godoy-Ruiz et al.

JOURNAL OF MOLECULAR BIOLOGY (2004)

Review Biochemistry & Molecular Biology

Elongation factors in protein biosynthesis

GR Andersen et al.

TRENDS IN BIOCHEMICAL SCIENCES (2003)

Article Biochemistry & Molecular Biology

Human plasma high-density lipoproteins are stabilized by kinetic factors

R Mehta et al.

JOURNAL OF MOLECULAR BIOLOGY (2003)

Article Biochemistry & Molecular Biology

Why are proteins marginally stable?

DM Taverna et al.

PROTEINS-STRUCTURE FUNCTION AND GENETICS (2002)

Review Multidisciplinary Sciences

The habitat and nature of early life

EG Nisbet et al.

NATURE (2001)

Review Biochemistry & Molecular Biology

Ubiquitin in chains

CM Pickart

TRENDS IN BIOCHEMICAL SCIENCES (2000)