4.8 Article

Quantitative assessment of ribosome drop-off in E. coli

Related references

Note: Only part of the references are listed.
Article Multidisciplinary Sciences

Bacteria differently regulate mRNA abundance to specifically respond to various stresses

Alexander Bartholomaeus et al.

PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY A-MATHEMATICAL PHYSICAL AND ENGINEERING SCIENCES (2016)

Review Microbiology

Mechanisms of ribosome rescue in bacteria

Kenneth C. Keiler

NATURE REVIEWS MICROBIOLOGY (2015)

Article Biochemistry & Molecular Biology

An Integrated Approach Reveals Regulatory Controls on Bacterial Translation Elongation

Arvind R. Subramaniam et al.

Article Biochemistry & Molecular Biology

Ensembl Genomes 2013: scaling up access to genome-wide data

Paul Julian Kersey et al.

NUCLEIC ACIDS RESEARCH (2014)

Article Multidisciplinary Sciences

Correcting direct effects of ethanol on translation and transcription machinery confers ethanol tolerance in bacteria

Rembrandt J. F. Haft et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2014)

Article Biochemical Research Methods

Fast gapped-read alignment with Bowtie 2

Ben Langmead et al.

NATURE METHODS (2012)

Article Biochemistry & Molecular Biology

Escherichia coli YaeJ protein mediates a novel ribosome-rescue pathway distinct from SsrA- and ArfA-mediated pathways

Yuhei Chadani et al.

MOLECULAR MICROBIOLOGY (2011)

Article Physics, Fluids & Plasmas

Length-dependent translation of messenger RNA by ribosomes

Angelo Valleriani et al.

PHYSICAL REVIEW E (2011)

Article Biochemical Research Methods

Genome-Scale Analysis of Translation Elongation with a Ribosome Flow Model

Shlomi Reuveni et al.

PLOS COMPUTATIONAL BIOLOGY (2011)

Article Biochemistry & Molecular Biology

An Evolutionarily Conserved Mechanism for Controlling the Efficiency of Protein Translation

Tamir Tuller et al.

Article Physics, Multidisciplinary

Turnover of messenger RNA: Polysome statistics beyond the steady state

A. Valleriani et al.

Article Biochemistry & Molecular Biology

Ribosome rescue by Escherichia coli ArfA (YhdL) in the absence of trans-translation system

Yuhei Chadani et al.

MOLECULAR MICROBIOLOGY (2010)

Article Biochemistry & Molecular Biology

The Sanger FASTQ file format for sequences with quality scores, and the Solexa/Illumina FASTQ variants

Peter J. A. Cock et al.

NUCLEIC ACIDS RESEARCH (2010)

Article Biochemistry & Molecular Biology

Global and local depletion of ternary complex limits translational elongation

Gong Zhang et al.

NUCLEIC ACIDS RESEARCH (2010)

Article Multidisciplinary Sciences

Quality control by the ribosome following peptide bond formation

Hani S. Zaher et al.

NATURE (2009)

Article Biology

A model of protein translation including codon bias, nonsense errors, and ribosome recycling

MA Gilchrist et al.

JOURNAL OF THEORETICAL BIOLOGY (2006)

Review Biochemistry & Molecular Biology

Ribosome structure and the mechanism of translation

V Ramakrishnan

Article Biochemistry & Molecular Biology

Gene Expression Omnibus: NCBI gene expression and hybridization array data repository

R Edgar et al.

NUCLEIC ACIDS RESEARCH (2002)

Article Biochemistry & Molecular Biology

Gradients in nucleotide and codon usage along Escherichia coli genes

SD Hooper et al.

NUCLEIC ACIDS RESEARCH (2000)