Related references
Note: Only part of the references are listed.Evaluation of Megasphaera elsdenii supplementation on rumen fermentation, production performance, carcass traits and health of ruminants: a meta-analysis
Irwan Susanto et al.
ANIMAL BIOSCIENCE (2023)
Gut microbiome is linked to functions of peripheral immune cells in transition cows during excessive lipolysis
Fengfei Gu et al.
MICROBIOME (2023)
Functional gene-guided enrichment plus in situ microsphere cultivation enables isolation of new crucial ureolytic bacteria from the rumen of cattle
Sijia Liu et al.
MICROBIOME (2023)
In Pursuit of Understanding the Rumen Microbiome
Rey Anthony Sanjorjo et al.
FERMENTATION-BASEL (2023)
Fresh Rumen Liquid Inoculant Enhances the Rumen Microbial Community Establishment in Pre-weaned Dairy Calves
Hanna Huuki et al.
FRONTIERS IN MICROBIOLOGY (2022)
Integrated meta-omics reveals new ruminal microbial features associated with feed efficiency in dairy cattle
Ming-Yuan Xue et al.
MICROBIOME (2022)
Fecal Microbiota Dynamics Reveal the Feasibility of Early Weaning of Yak Calves under Conventional Grazing System
Jianbo Zhang et al.
BIOLOGY-BASEL (2022)
A Novel Approach for Monitoring the Volatile Metabolome in Biological Samples from Ruminants through Miniaturized Liquid-Liquid Extraction and Multiclass Gas Chromatography Analysis
Liliana Cordeiro et al.
JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY (2022)
Plant Cell Wall Breakdown by Hindgut Microorganisms: Can We Get Scientific Insights From Rumen Microorganisms?
Zhenwei Zhang et al.
JOURNAL OF EQUINE VETERINARY SCIENCE (2022)
Gut health benefit and application of postbiotics in animal production
Yifan Zhong et al.
JOURNAL OF ANIMAL SCIENCE AND BIOTECHNOLOGY (2022)
Gut microbiota-derived ursodeoxycholic acid from neonatal dairy calves improves intestinal homeostasis and colitis to attenuate extended-spectrum β-lactamase-producing enteroaggregative Escherichia coli infection
Zhiyuan He et al.
MICROBIOME (2022)
Impacts of heat stress on global cattle production during the 21st century: a modelling study
Philip Thornton et al.
Lancet Planetary Health (2022)
Rumen multi-omics addressing diet-host-microbiome interplay in farm animals: a review
Sonam Dixit et al.
ANIMAL BIOTECHNOLOGY (2022)
Evaluating Starter Feeding on Ruminal Function in Yak Calves: Combined 16S rRNA Sequencing and Metabolomics
Yin Wang et al.
FRONTIERS IN MICROBIOLOGY (2022)
Progressive microbial adaptation of the bovine rumen and hindgut in response to a step-wise increase in dietary starch and the influence of phytogenic supplementation
Sara Ricci et al.
FRONTIERS IN MICROBIOLOGY (2022)
The Role of Rumen Microbiota and Its Metabolites in Subacute Ruminal Acidosis (SARA)-Induced Inflammatory Diseases of Ruminants
Yunhe Fu et al.
MICROORGANISMS (2022)
Utilizing the Gastrointestinal Microbiota to Modulate Cattle Health through the Microbiome-Gut-Organ Axes
Christina B. Welch et al.
MICROORGANISMS (2022)
Ecosystem-specific microbiota and microbiome databases in the era of big data
Victor Lobanov et al.
ENVIRONMENTAL MICROBIOME (2022)
Co-Cultures of Lactobacillus acidophilus and Bacillus subtilis Enhance Mucosal Barrier by Modulating Gut Microbiota-Derived Short-Chain Fatty Acids
Zhengjun Xie et al.
NUTRIENTS (2022)
Short Chain Fatty Acids (SCFAs) Are the Potential Immunomodulatory Metabolites in Controlling Staphylococcus aureus-Mediated Mastitis
Muhammad Akhtar et al.
NUTRIENTS (2022)
A buffalo rumen-derived probiotic (SN-6) could effectively increase simmental growth performance by regulating fecal microbiota and metabolism
Shumin Yang et al.
FRONTIERS IN MICROBIOLOGY (2022)
Lactate uptake in the rumen and its contributions to subacute rumen acidosis of goats induced by high-grain diets
Banglin He et al.
FRONTIERS IN VETERINARY SCIENCE (2022)
Gut microbiome-produced metabolites in pigs: a review on their biological functions and the influence of probiotics
Robie Vasquez et al.
JOURNAL OF ANIMAL SCIENCE AND TECHNOLOGY (2022)
Gut Microbiota and Their Role in Health and Metabolic Disease of Dairy Cow
Qingbiao Xu et al.
FRONTIERS IN NUTRITION (2021)
Rumen bacteria influence milk protein yield of yak grazing on the Qinghai-Tibet plateau
Qingshan Fan et al.
ANIMAL BIOSCIENCE (2021)
Impact of selected environmental factors on microbiome of the digestive tract of ruminants
Paulina Cholewinska et al.
BMC VETERINARY RESEARCH (2021)
Metagenomic analysis reveals a dynamic microbiome with diversified adaptive functions to utilize high lignocellulosic forages in the cattle rumen
Javad Gharechahi et al.
ISME JOURNAL (2021)
The potential for mitigation of methane emissions in ruminants through the application of metagenomics, metabolomics, and other -OMICS technologies
Victoria Asselstine et al.
JOURNAL OF ANIMAL SCIENCE (2021)
The Interplay between the Gut Microbiome and the Immune System in the Context of Infectious Diseases throughout Life and the Role of Nutrition in Optimizing Treatment Strategies
Selma P. Wiertsema et al.
NUTRIENTS (2021)
Early life dietary intervention in dairy calves results in a long-term reduction in methane emissions
S. J. Meale et al.
SCIENTIFIC REPORTS (2021)
Rumen microbiome structure and metabolites activity in dairy cows with clinical and subclinical mastitis
Yue Wang et al.
JOURNAL OF ANIMAL SCIENCE AND BIOTECHNOLOGY (2021)
Characterization of the Bacterial Community of Rumen in Dairy Cows with Laminitis
Jian Guo et al.
GENES (2021)
Methane Emissions from Ruminants in Australia: Mitigation Potential and Applicability of Mitigation Strategies
John L. Black et al.
ANIMALS (2021)
Metaproteomics-An Advantageous Option in Studies of Host-Microbiota Interaction
Oleg Karaduta et al.
MICROORGANISMS (2021)
Structural diversity, functional aspects and future therapeutic applications of human gut microbiome
Soma Ghosh et al.
ARCHIVES OF MICROBIOLOGY (2021)
Metagenomics: a path to understanding the gut microbiome
Sandi Yen et al.
MAMMALIAN GENOME (2021)
Peptide profiling in cow urine reveals molecular signature of physiology-driven pathways and in-silico predicted bioactive properties
Rohit Kumar et al.
SCIENTIFIC REPORTS (2021)
Feeding Systems and Host Breeds Influence Ruminal Fermentation, Methane Production, Microbial Diversity and Metagenomic Gene Abundance
Rajaraman Bharanidharan et al.
FRONTIERS IN MICROBIOLOGY (2021)
Characterizing the Cattle Gut Microbiome in Farms with a High and Low Prevalence of Shiga Toxin Producing Escherichia coli
Karla Vasco et al.
MICROORGANISMS (2021)
Gut microbiome colonization and development in neonatal ruminants: Strategies, prospects, and opportunities
Muhammad A. Arshad et al.
ANIMAL NUTRITION (2021)
Ruminal microbiota-host interaction and its effect on nutrient metabolism
Kaizhen Liu et al.
ANIMAL NUTRITION (2021)
Gut microbiota and systemic immunity in health and disease
Bernard C. Lo et al.
INTERNATIONAL IMMUNOLOGY (2021)
Current challenges and best-practice protocols for microbiome analysis
Richa Bharti et al.
BRIEFINGS IN BIOINFORMATICS (2021)
Repeated inoculation with fresh rumen fluid before or during weaning modulates the microbiota composition and co-occurrence of the rumen and colon of lambs
Shaobo Yu et al.
BMC MICROBIOLOGY (2020)
Proteomics fingerprints of systemic mechanisms of adaptation to bile in Lactobacillus fermentum
Syed Azmal Ali et al.
JOURNAL OF PROTEOMICS (2020)
The Role of the Gut Microbiome in Cattle Production and Health: Driver or Passenger?
Eóin O'Hara et al.
Annual Review of Animal Biosciences (2020)
Extending Burk Dehority's Perspectives on the Role of Ciliate Protozoa in the Rumen
Jeffrey L. Firkins et al.
FRONTIERS IN MICROBIOLOGY (2020)
Metatranscriptomic Profiling Reveals the Effect of Breed on Active Rumen Eukaryotic Composition in Beef Cattle With Varied Feed Efficiency
Yawei Zhang et al.
FRONTIERS IN MICROBIOLOGY (2020)
Intestinal Flora and Disease Mutually Shape the Regional Immune System in the Intestinal Tract
Bolun Zhou et al.
FRONTIERS IN IMMUNOLOGY (2020)
Microbiome definition re-visited: old concepts and new challenges
Gabriele Berg et al.
MICROBIOME (2020)
Effect of Feeding Improved Grass Hays and Eragrostis tef Straw Silage on Milk Yield, Nitrogen Utilization, and Methane Emission of Lactating Fogera Dairy Cows in Ethiopia
Shigdaf Mekuriaw et al.
ANIMALS (2020)
Postbiotics-parabiotics: the new horizons in microbial biotherapy and functional foods
Basavaprabhu H. Nataraj et al.
MICROBIAL CELL FACTORIES (2020)
Influence of host genetics in shaping the rumen bacterial community in beef cattle
Waseem Abbas et al.
SCIENTIFIC REPORTS (2020)
High-Resolution Mass Spectrometer-Based Ultra-Deep Profile of Milk Whey Proteome in Indian Zebu (Sahiwal) Cattle
Alka Chopra et al.
FRONTIERS IN NUTRITION (2020)
Draft Genome Sequences of Fructobacillus fructosus DPC 7238 and Leuconostoc mesenteroides DPC 7261, Mannitol-Producing Organisms Isolated from Fructose-Rich Honeybee-Resident Flowers on an Irish Farm
Pradip Behare et al.
MICROBIOLOGY RESOURCE ANNOUNCEMENTS (2020)
Phytogenic Additives Can Modulate Rumen Microbiome to Mediate Fermentation Kinetics and Methanogenesis Through Exploiting Diet-Microbe Interaction
Faiz-ul Hassan et al.
FRONTIERS IN VETERINARY SCIENCE (2020)
Altering the Gut Microbiome of Cattle: Considerations of Host-Microbiome Interactions for Persistent Microbiome Manipulation
Brooke A. Clemmons et al.
MICROBIAL ECOLOGY (2019)
Effects and immune responses of probiotic treatment in ruminants
Sarah Raabis et al.
VETERINARY IMMUNOLOGY AND IMMUNOPATHOLOGY (2019)
Challenges and promise at the interface of metaproteomics and genomics: an overview of recent progress in metaproteogenomic data analysis
Henning Schiebenhoefer et al.
EXPERT REVIEW OF PROTEOMICS (2019)
Invited review: Nitrogen in ruminant nutrition: A review of measurement techniques
A. N. Hristov et al.
JOURNAL OF DAIRY SCIENCE (2019)
Bovine Genome-Microbiome Interactions: Metagenomic Frontier for the Selection of Efficient Productivity in Cattle Systems
Philip R. Myer
MSYSTEMS (2019)
Metaproteomic and Metabolomic Approaches for Characterizing the Gut Microbiome
Danielle L. Peters et al.
PROTEOMICS (2019)
Gut Microbiome: Profound Implications for Diet and Disease
Ronald D. Hills et al.
NUTRIENTS (2019)
Host genetics influence the rumen microbiota and heritable rumen microbial features associate with feed efficiency in cattle
Fuyong Li et al.
MICROBIOME (2019)
Evolutionary and Ecological Consequences of Gut Microbial Communities
Nancy A. Moran et al.
Annual Review of Ecology Evolution and Systematics (2019)
Factors affecting the composition of the gut microbiota, and its modulation
Nihal Hasan et al.
PEERJ (2019)
Western Diet and the Immune System: An Inflammatory Connection
Anette Christ et al.
IMMUNITY (2019)
Taxonomic and Functional Compositions of the Small Intestinal Microbiome in Neonatal Calves Provide a Framework for Understanding Early Life Gut Health
Nilusha Malmuthuge et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2019)
Effect of Heat Stress on Bacterial Composition and Metabolism in the Rumen of Lactating Dairy Cows
Shengguo Zhao et al.
ANIMALS (2019)
Changed Caecal Microbiota and Fermentation Contribute to the Beneficial Effects of Early Weaning with Alfalfa Hay, Starter Feed, and Milk Replacer on the Growth and Organ Development of Yak Calves
Shengru Wu et al.
ANIMALS (2019)
Heat stress risk in European dairy cattle husbandry under different climate change scenarios - uncertainties and potential impacts
Sabrina Hempel et al.
EARTH SYSTEM DYNAMICS (2019)
The rumen microbiome: a crucial consideration when optimising milk and meat production and nitrogen utilisation efficiency
Chloe Matthews et al.
GUT MICROBES (2019)
Histamine activates inflammatory response and depresses casein synthesis in mammary gland of dairy cows during SARA
Guangjun Chang et al.
BMC VETERINARY RESEARCH (2018)
Effects of repeated subacute ruminal acidosis challenges on the adaptation of the rumen bacterial community in Holstein bulls
Rie Nagata et al.
JOURNAL OF DAIRY SCIENCE (2018)
Interrelations between the rumen microbiota and production, behavioral, rumen fermentation, metabolic, and immunological attributes of dairy cows
M. Schaeren et al.
JOURNAL OF DAIRY SCIENCE (2018)
Global proteomic analysis of water buffalo (Bubalus bubalis) saliva at different stages of estrous cycle using high throughput mass spectrometry
N. G. Shashikumar et al.
THERIOGENOLOGY (2018)
RUMINANT NUTRITION SYMPOSIUM: Tiny but mighty: the role of the rumen microbes in livestock production (vol 96, pg 752, 2018)
Kristi M. Cammack et al.
JOURNAL OF ANIMAL SCIENCE (2018)
Synergetic action between the rumen microbiota and bovine health
Mohamed Zeineldin et al.
MICROBIAL PATHOGENESIS (2018)
Host genetics and the rumen microbiome jointly associate with methane emissions in dairy cows
Gareth Frank Difford et al.
PLOS GENETICS (2018)
Gut microbiota: Role in pathogen colonization, immune responses, and inflammatory disease
Joseph M. Pickard et al.
IMMUNOLOGICAL REVIEWS (2017)
Inflammatory mechanisms linking obesity and metabolic disease
Alan R. Saltiel et al.
JOURNAL OF CLINICAL INVESTIGATION (2017)
Label-free quantitative proteomic analysis of Lactobacillus fermenturn NCDC 400 during bile salt exposure
Gurjeet Kaur et al.
JOURNAL OF PROTEOMICS (2017)
High-resolution mass spectrometry-based global proteomic analysis of probiotic strains Lactobacillus fermentum NCDC 400 and RS2
Parijat Pragya et al.
JOURNAL OF PROTEOMICS (2017)
Changes in Microbiota in Rumen Digesta and Feces Due to a Grain-Based Subacute Ruminal Acidosis (SARA) Challenge
Jan C. Plaizier et al.
MICROBIAL ECOLOGY (2017)
Livestock metabolomics and the livestock metabolome: A systematic review
Seyed Ali Goldansaz et al.
PLOS ONE (2017)
Heritable Bovine Rumen Bacteria Are Phylogenetically Related and Correlated with the Cow's Capacity To Harvest Energy from Its Feed
Goor Sasson et al.
MBIO (2017)
Methane Production in Dairy Cows Correlates with Rumen Methanogenic and Bacterial Community Structure
Rebecca Danielsson et al.
FRONTIERS IN MICROBIOLOGY (2017)
A Structural and Functional Elucidation of the Rumen Microbiome Influenced by Various Diets and Microenvironments
Simon Deusch et al.
FRONTIERS IN MICROBIOLOGY (2017)
Understanding host-microbial interactions in rumen: searching the best opportunity for microbiota manipulation
Nilusha Malmuthuge et al.
JOURNAL OF ANIMAL SCIENCE AND BIOTECHNOLOGY (2017)
The Immune System Bridges the Gut Microbiota with Systemic Energy Homeostasis: Focus on TLRs, Mucosal Barrier, and SCFAs
Martina Spiljar et al.
FRONTIERS IN IMMUNOLOGY (2017)
Repeated inoculation of cattle rumen with bison rumen contents alters the rumen microbiome and improves nitrogen digestibility in cattle
Gabriel O. Ribeiro et al.
SCIENTIFIC REPORTS (2017)
Rumen Fluid Metabolomics Analysis Associated with Feed Efficiency on Crossbred Steers
Virginia M. Artegoitia et al.
SCIENTIFIC REPORTS (2017)
Metagenomic investigation of gastrointestinal microbiome in cattle
Minseok Kim et al.
ASIAN-AUSTRALASIAN JOURNAL OF ANIMAL SCIENCES (2017)
Dietary supplementation of Butyrivibrio fibrisolvens alters fatty acids of milk and rumen fluid in lactating goats
Swati Shivani et al.
JOURNAL OF THE SCIENCE OF FOOD AND AGRICULTURE (2016)
Transcriptome analysis reveals regional and temporal differences in mucosal immune system development in the small intestine of neonatal calves
Guanxiang Liang et al.
BMC GENOMICS (2016)
The gut microbiome as a virtual endocrine organ with implications for farm and domestic animal endocrinology
T. F. O'Callaghan et al.
DOMESTIC ANIMAL ENDOCRINOLOGY (2016)
Specific microbiome-dependent mechanisms underlie the energy harvest efficiency of ruminants
Sheerli Kruger Ben Shabat et al.
ISME JOURNAL (2016)
Differences down-under: alcohol-fueled methanogenesis by archaea present in Australian macropodids
Emily C. Hoedt et al.
ISME JOURNAL (2016)
Microbial community profiles of the jejunum from steers differing in feed efficiency
P. R. Myer et al.
JOURNAL OF ANIMAL SCIENCE (2016)
Induction of Subacute Ruminal Acidosis Affects the Ruminal Microbiome and Epithelium
Joshua C. McCann et al.
FRONTIERS IN MICROBIOLOGY (2016)
Gut microbiome and omics: a new definition to ruminant production and health
Nilusha Malmuthuge et al.
ANIMAL FRONTIERS (2016)
Effects of grain feeding on microbiota in the digestive tract of cattle
E. Khafipour et al.
ANIMAL FRONTIERS (2016)
Mucosal immunity to pathogenic intestinal bacteria
Araceli Perez-Lopez et al.
NATURE REVIEWS IMMUNOLOGY (2016)
Dietary impacts on rumen microbiota in beef and dairy production
J. J. Loor et al.
ANIMAL FRONTIERS (2016)
Metabolomics of Four Biofluids from Dairy Cows: Potential Biomarkers for Milk Production and Quality
Hui-Zeng Sun et al.
JOURNAL OF PROTEOME RESEARCH (2015)
Model systems to analyze the role of miRNAs and commensal microflora in bovine mucosal immune system development
Guanxiang Liang et al.
MOLECULAR IMMUNOLOGY (2015)
Programming rumen bacterial communities in newborn Merino lambs
I. De Barbieri et al.
SMALL RUMINANT RESEARCH (2015)
The Role of Ciliate Protozoa in the Rumen
Charles J. Newbold et al.
FRONTIERS IN MICROBIOLOGY (2015)
Microbial community profiles of the colon from steers differing in feed efficiency
Phillip R. Myer et al.
SPRINGERPLUS (2015)
The Role of TCA Cycle Anaplerosis in Ketosis and Fatty Liver in Periparturient Dairy Cows
Heather M. White
ANIMALS (2015)
The gut microbiome and its potential role in the development and function of newborn calf gastrointestinal tract
Nilusha Malmuthuge et al.
FRONTIERS IN VETERINARY SCIENCE (2015)
Establishment of ruminal bacterial community in dairy calves from birth to weaning is sequential
M. Rey et al.
JOURNAL OF APPLIED MICROBIOLOGY (2014)
Genetic and biochemical approaches towards unravelling the degradation of gallotannins by Streptococcus gallolyticus
Natalia Jimenez et al.
MICROBIAL CELL FACTORIES (2014)
Microbiota and neurodevelopmental windows: implications for brain disorders
Yuliya E. Borre et al.
TRENDS IN MOLECULAR MEDICINE (2014)
An Antimethanogenic Nutritional Intervention in Early Life of Ruminants Modifies Ruminal Colonization by Archaea
Leticia Abecia et al.
ARCHAEA-AN INTERNATIONAL MICROBIOLOGICAL JOURNAL (2014)
The Effect of High-Fat Diet-Induced Pathophysiological Changes in the Gut on Obesity: What Should be the Ideal Treatment?
Chooi Y. Lee
CLINICAL AND TRANSLATIONAL GASTROENTEROLOGY (2013)
Effect of Phenotypic Residual Feed Intake and Dietary Forage Content on the Rumen Microbial Community of Beef Cattle
Ciara A. Carberry et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2012)
Characterization of the rumen microbiota of pre-ruminant calves using metagenomic tools
Robert W. Li et al.
ENVIRONMENTAL MICROBIOLOGY (2012)
A metabolomics approach to uncover the effects of grain diets on rumen health in dairy cows
F. Saleem et al.
JOURNAL OF DAIRY SCIENCE (2012)
Changes in Bacterial Diversity Associated with Epithelial Tissue in the Beef Cow Rumen during the Transition to a High-Grain Diet
Yanhong Chen et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2011)
Enterohaemorrhagic Escherichia coli gains a competitive advantage by using ethanolamine as a nitrogen source in the bovine intestinal content
Yolande Bertin et al.
ENVIRONMENTAL MICROBIOLOGY (2011)
Methanogen community structure in the rumens of farmed sheep, cattle and red deer fed different diets
Jeyamalar Jeyanathan et al.
FEMS MICROBIOLOGY ECOLOGY (2011)
Restricting Microbial Exposure in Early Life Negates the Immune Benefits Associated with Gut Colonization in Environments of High Microbial Diversity
Imke E. Mulder et al.
PLOS ONE (2011)
Rumen Microbial Population Dynamics during Adaptation to a High-Grain Diet
S. C. Fernando et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2010)
Gluconeogenesis in Dairy Cows: The Secret of Making Sweet Milk from Sour Dough
Joerg R. Aschenbach et al.
IUBMB LIFE (2010)
Effect of pH and level of concentrate in the diet on the production of biohydrogenation intermediates in a dual-flow continuous culture
M. C. Fuentes et al.
JOURNAL OF DAIRY SCIENCE (2009)
Fermentation of pectin and glucose, and activity of pectin-degrading enzymes in the rumen bacterium Lachnospira multiparus
D Dusková et al.
LETTERS IN APPLIED MICROBIOLOGY (2001)