4.7 Article

Ceg1 depletion reveals mechanisms governing degradation of non-capped RNAs in Saccharomyces cerevisiae

Related references

Note: Only part of the references are listed.
Article Biochemistry & Molecular Biology

A guard protein mediated quality control mechanism monitors 5'-capping of pre-mRNAs

Sandra Klama et al.

Summary: Efficient gene expression requires properly matured mRNAs for translation. The guard protein Npl3 monitors the 5' capping of transcripts and plays a role in degrading improperly capped transcripts.

NUCLEIC ACIDS RESEARCH (2022)

Article Biochemistry & Molecular Biology

A novel 5 '-hydroxyl dinucleotide hydrolase activity for the DXO/Rai1 family of enzymes

Selom K. Doamekpor et al.

NUCLEIC ACIDS RESEARCH (2020)

Review Biochemistry & Molecular Biology

Interplay of mRNA capping and transcription machineries

Zaur M. Kachaev et al.

BIOSCIENCE REPORTS (2020)

Article Biochemistry & Molecular Biology

Ribo-Pop: simple, cost-effective, and widely applicable ribosomal RNA depletion

Mary Kay Thompson et al.

Review Genetics & Heredity

Termination of Transcription by RNA Polymerase II: BOOM!

Joshua D. Eaton et al.

TRENDS IN GENETICS (2020)

Review Genetics & Heredity

Small Nucleolar RNAs Tell a Different Tale

Joanna Kufel et al.

TRENDS IN GENETICS (2019)

Article Biology

Transcriptome maps of general eukaryotic RNA degradation factors

Salma Sohrabi-Jahromi et al.

ELIFE (2019)

Article Biochemistry & Molecular Biology

Eukaryotic initiation factor 4E (eIF4E): A recap of the cap-binding protein

Asiya Batool et al.

JOURNAL OF CELLULAR BIOCHEMISTRY (2019)

Article Biology

GC content shapes mRNA storage and decay in human cells

Maite Courel et al.

ELIFE (2019)

Editorial Material Biochemistry & Molecular Biology

Tailing Off: PABP and CNOT Generate Cycles of mRNA Deadenylation

Stefan Bresson et al.

MOLECULAR CELL (2018)

Article Multidisciplinary Sciences

Nuclear fate of yeast snoRNA is determined by co-transcriptional Rnt1 cleavage

Pawel Grzechnik et al.

NATURE COMMUNICATIONS (2018)

Article Biochemistry & Molecular Biology

Structured RNAs that evade or confound exonucleases: function follows form

Benjamin M. Akiyama et al.

CURRENT OPINION IN STRUCTURAL BIOLOGY (2016)

Article Biochemistry & Molecular Biology

mRNA capping: biological functions and applications

Anand Ramanathan et al.

NUCLEIC ACIDS RESEARCH (2016)

Article Biochemistry & Molecular Biology

Molecular Basis of Transcription-Coupled Pre-mRNA Capping

Fuensanta W. Martinez-Rucobo et al.

MOLECULAR CELL (2015)

Review Multidisciplinary Sciences

Discovery of m7G-cap in eukaryotic mRNAs

Yasuhiro Furuichi

PROCEEDINGS OF THE JAPAN ACADEMY SERIES B-PHYSICAL AND BIOLOGICAL SCIENCES (2015)

Article Biochemistry & Molecular Biology

Global Analysis of mRNA Isoform Half-Lives Reveals Stabilizing and Destabilizing Elements in Yeast

Joseph V. Geisberg et al.

Review Microbiology

Calcineurin-Crz1 Signaling in Lower Eukaryotes

S. Thewes

EUKARYOTIC CELL (2014)

Article Biotechnology & Applied Microbiology

Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2

Michael I. Love et al.

GENOME BIOLOGY (2014)

Article Biochemistry & Molecular Biology

Cap Completion and C-Terminal Repeat Domain Kinase Recruitment Underlie the Initiation-Elongation Transition of RNA Polymerase II

Michael Lidschreiber et al.

MOLECULAR AND CELLULAR BIOLOGY (2013)

Article Biochemistry & Molecular Biology

Large FK506-Binding Proteins Shape the Pharmacology of Rapamycin

Andreas M. Maerz et al.

MOLECULAR AND CELLULAR BIOLOGY (2013)

Article Multidisciplinary Sciences

Extensive transcriptional heterogeneity revealed by isoform profiling

Vicent Pelechano et al.

NATURE (2013)

Review Genetics & Heredity

Regulation of cytoplasmic mRNA decay

Daniel R. Schoenberg et al.

NATURE REVIEWS GENETICS (2012)

Review Microbiology

Conventional and unconventional mechanisms for capping viral mRNA

Etienne Decroly et al.

NATURE REVIEWS MICROBIOLOGY (2012)

Article Biochemistry & Molecular Biology

A direct interaction between DCP1 and XRN1 couples mRNA decapping to 5′ exonucleolytic degradation

Joerg E. Braun et al.

NATURE STRUCTURAL & MOLECULAR BIOLOGY (2012)

Article Biochemistry & Molecular Biology

Coupled 5′ Nucleotide Recognition and Processivity in Xrn1-Mediated mRNA Decay

Martin Jinek et al.

MOLECULAR CELL (2011)

Article Biochemistry & Molecular Biology

Distinct RNA degradation pathways and 3' extensions of yeast non-coding RNA species

Sebastian Marquardt et al.

TRANSCRIPTION-AUSTIN (2011)

Article Biochemistry & Molecular Biology

The Yeast 5′-3′ Exonuclease Rat1p Functions during Transcription Elongation by RNA Polymerase II

Silvia Jimeno-Gonzalez et al.

MOLECULAR CELL (2010)

Article Multidisciplinary Sciences

Identification of a quality-control mechanism for mRNA 5′-end capping

Xinfu Jiao et al.

NATURE (2010)

Article Biochemical Research Methods

The Sequence Alignment/Map format and SAMtools

Heng Li et al.

BIOINFORMATICS (2009)

Article Multidisciplinary Sciences

Bidirectional promoters generate pervasive transcription in yeast

Zhenyu Xu et al.

NATURE (2009)

Article Biochemistry & Molecular Biology

Apoptosis and autophagy induction in mammalian cells by small interfering RNA knockdown of mRNA capping enzymes

Chun Chu et al.

MOLECULAR AND CELLULAR BIOLOGY (2008)

Article Biochemistry & Molecular Biology

The anchor-away technique: Rapid, conditional establishment of yeast mutant phenotypes

Hirohito Haruki et al.

MOLECULAR CELL (2008)

Article Biochemistry & Molecular Biology

High guanine and cytosine content increases mRNA levels in mammalian cells

Grzegorz Kudla et al.

PLOS BIOLOGY (2006)

Article Biochemistry & Molecular Biology

Distinction and relationship between elongation rate and processivity of RNA polymerase II in vivo

PB Mason et al.

MOLECULAR CELL (2005)

Article Biochemistry & Molecular Biology

The signature of selection mediated by expression on human genes

AO Urrutia et al.

GENOME RESEARCH (2003)

Review Biochemistry & Molecular Biology

The ends of the affair: Capping and polyadenylation

AJ Shatkin et al.

NATURE STRUCTURAL BIOLOGY (2000)