4.8 Article

A scored human protein-protein interaction network to catalyze genomic interpretation

Journal

NATURE METHODS
Volume 14, Issue 1, Pages 61-64

Publisher

NATURE RESEARCH
DOI: 10.1038/nmeth.4083

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Funding

  1. Fund for Medical Discovery Award from the Executive Committee on Research of Massachusetts General Hospital
  2. Stanley Center at the Broad Institute of MIT and Harvard
  3. Broadnext10 Grant from the Broad Institute of MIT and Harvard
  4. NIMH [1R01MH109903]
  5. Lundbeck Foundation
  6. Novo Nordisk Foundation [NNF14CC0001]
  7. [1P01HD068250]
  8. Novo Nordisk Foundation Center for Protein Research [PI S�ren Brunak] Funding Source: researchfish
  9. EUNICE KENNEDY SHRIVER NATIONAL INSTITUTE OF CHILD HEALTH & HUMAN DEVELOPMENT [P01HD068250] Funding Source: NIH RePORTER
  10. NATIONAL INSTITUTE OF MENTAL HEALTH [R01MH109903] Funding Source: NIH RePORTER

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Genome-scale human protein-protein interaction networks are critical to understanding cell biology and interpreting genomic data, but challenging to produce experimentally. Through data integration and quality control, we provide a scored human protein-protein interaction network (InWeb_InBioMap, or InWeb_IM) with severalfold more interactions (>500,000) and better functional biological relevance than comparable resources. We illustrate that InWeb_InBioMap enables functional interpretation of >4,700 cancer genomes and genes involved in autism.

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