Journal
NATURE METHODS
Volume 13, Issue 5, Pages 439-+Publisher
NATURE PUBLISHING GROUP
DOI: 10.1038/NMETH.3804
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Funding
- National Institutes of Health (NIH) [1DP20D007292, 1R01EB018659, 5R21HD072481]
- Office of Naval Research (ONR) [N000141110914, N000141010827, N000141310593]
- National Science Foundation (NSF) [CCF1054898, CCF1162459]
- Wyss Institute for Biologically Engineering Faculty Startup Fund
- Pew Scholar Award
- Alexander von Humboldt Foundation through Feodor-Lynen Fellowship
- HHMI International Student Research Fellowships
- Division of Computing and Communication Foundations
- Direct For Computer & Info Scie & Enginr [1317694] Funding Source: National Science Foundation
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Counting molecules in complexes is challenging, even with super-resolution microscopy. Here, we use the programmable and specific binding of dye-labeled DNA probes to count integer numbers of targets. This method, called quantitative points accumulation in nanoscale topography (qPAINT), works independently of dye photophysics for robust counting with high precision and accuracy over a wide dynamic range. qPAINT was benchmarked on DNA nanostructures and demonstrated for cellular applications by quantifying proteins in situ and the number of single-molecule FISH probes bound to an mRNA target.
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