Related references
Note: Only part of the references are listed.Dynamic Gene Regulatory Networks Drive Hematopoietic Specification and Differentiation
Debbie K. Goode et al.
DEVELOPMENTAL CELL (2016)
Hoxb5 marks long-term haematopoietic stem cells and reveals a homogenous perivascular niche
James Y. Chen et al.
NATURE (2016)
Diffusion maps for high-dimensional single-cell analysis of differentiation data
Laleh Haghverdi et al.
BIOINFORMATICS (2015)
Scl binds to primed enhancers in mesoderm to regulate hematopoietic and cardiac fate divergence
Tonis Org et al.
EMBO JOURNAL (2015)
Computational analysis of cell-to-cell heterogeneity in single-cell RNA-sequencing data reveals hidden subpopulations of cells
Florian Buettner et al.
NATURE BIOTECHNOLOGY (2015)
Decoding the regulatory network of early blood development from single-cell gene expression measurements
Victoria Moignard et al.
NATURE BIOTECHNOLOGY (2015)
Spatial reconstruction of single-cell gene expression data
Rahul Satija et al.
NATURE BIOTECHNOLOGY (2015)
High-throughput spatial mapping of single-cell RNA-seq data to tissue of origin
Kaia Achim et al.
NATURE BIOTECHNOLOGY (2015)
Myosin-II-mediated cell shape changes and cell intercalation contribute to primitive streak formation
Emil Rozbicki et al.
NATURE CELL BIOLOGY (2015)
Computational and analytical challenges in single-cell transcriptomics
Oliver Stegle et al.
NATURE REVIEWS GENETICS (2015)
Selective expression of sense and antisense transcripts of the sushi-ichi-related retrotransposon - derived family during mouse placentogenesis
Christine Henke et al.
RETROVIROLOGY (2015)
HTSeq-a Python framework to work with high-throughput sequencing data
Simon Anders et al.
BIOINFORMATICS (2015)
CODEX: a next-generation sequencing experiment database for the haematopoietic and embryonic stem cell communities
Manuel Sanchez-Castillo et al.
NUCLEIC ACIDS RESEARCH (2015)
TBX1 Represses Vegfr2 Gene Expression and Enhances the Cardiac Fate of VEGFR2+Cells
Gabriella Lania et al.
PLOS ONE (2015)
Clonal analysis identifies hemogenic endothelium as the source of the blood-endothelial common lineage in the mouse embryo
Laura Padron-Barthe et al.
BLOOD (2014)
Prdml functions in the mesoderm of the second heart field, where it interacts genetically with Tbxl, during outflow tract morphogenesis in the mouse embryo
Stephane D. Vincent et al.
HUMAN MOLECULAR GENETICS (2014)
Full-length RNA-seq from single cells using Smart-seq2
Simone Picelli et al.
NATURE PROTOCOLS (2014)
PolyaPeak: Detecting Transcription Factor Binding Sites from ChIP-seq Using Peak Shape Information
Hao Wu et al.
PLOS ONE (2014)
Dose-dependent Nodal/Smad signals pattern the early mouse embryo
Elizabeth J. Robertson
SEMINARS IN CELL & DEVELOPMENTAL BIOLOGY (2014)
Expression of Podocalyxin Separates the Hematopoietic and Vascular Potentials of Mouse Embryonic Stem Cell-Derived Mesoderm
Hailan Zhang et al.
STEM CELLS (2014)
Epigenetics reloaded: the single-cell revolution
Poonam Bheda et al.
TRENDS IN CELL BIOLOGY (2014)
Direct Reprogramming of Murine Fibroblasts to Hematopoietic Progenitor Cells
Kiran Batta et al.
CELL REPORTS (2014)
Circulation-Independent Differentiation Pathway from Extraembryonic Mesoderm toward Hematopoietic Stem Cells via Hemogenic Angioblasts
Yosuke Tanaka et al.
CELL REPORTS (2014)
A carrier-assisted ChIP-seq method for estrogen receptor-chromatin interactions from breast cancer core needle biopsy samples
Wilbert Zwart et al.
BMC GENOMICS (2013)
Gene set control analysis predicts hematopoietic control mechanisms from genome-wide transcription factor binding data
Anagha Joshi et al.
EXPERIMENTAL HEMATOLOGY (2013)
Accounting for technical noise in single-cell RNA-seq experiments
Philip Brennecke et al.
NATURE METHODS (2013)
Single site-specific integration targeting coupled with embryonic stem cell differentiation provides a high-throughput alternative to in vivo enhancer analyses
Adam C. Wilkinson et al.
BIOLOGY OPEN (2013)
TBX3 Directs Cell-Fate Decision toward Mesendoderm
Clair E. Weidgang et al.
STEM CELL REPORTS (2013)
Gastrulation: Making and Shaping Germ Layers
Lila Solnica-Krezel et al.
ANNUAL REVIEW OF CELL AND DEVELOPMENTAL BIOLOGY, VOL 28 (2012)
Scl Represses Cardiomyogenesis in Prospective Hemogenic Endothelium and Endocardium
Ben Van Handel et al.
CELL (2012)
The transcriptional programme controlled by Runx1 during early embryonic blood development
Yosuke Tanaka et al.
DEVELOPMENTAL BIOLOGY (2012)
Single-lineage transcriptome analysis reveals key regulatory pathways in primitive erythroid progenitors in the mouse embryo
Joan Isern et al.
BLOOD (2011)
Identity and Fate of Tbx4-Expressing Cells Reveal Developmental Cell Fate Decisions in the Allantois, Limb, and External Genitalia
L. A. Naiche et al.
DEVELOPMENTAL DYNAMICS (2011)
edgeR: a Bioconductor package for differential expression analysis of digital gene expression data
Mark D. Robinson et al.
BIOINFORMATICS (2010)
Combinatorial Transcriptional Control In Blood Stem/Progenitor Cells: Genome-wide Analysis of Ten Major Transcriptional Regulators
Nicola K. Wilson et al.
CELL STEM CELL (2010)
O-fucosylation of thrombospondin type 1 repeats restricts epithelial to mesenchymal transition (EMT) and maintains epiblast pluripotency during mouse gastrulation
Jianguang Du et al.
DEVELOPMENTAL BIOLOGY (2010)
Differential expression analysis for sequence count data
Simon Anders et al.
GENOME BIOLOGY (2010)
Foxa2 regulates polarity and epithelialization in the endoderm germ layer of the mouse embryo
Ingo Burtscher et al.
DEVELOPMENT (2009)
The haemangioblast generates haematopoietic cells through a haemogenic endothelium stage
Christophe Lancrin et al.
NATURE (2009)
Microarray analysis of Foxa2 mutant mouse embryos reveals novel gene expression and inductive roles for the gastrula organizer and its derivatives
Owen J. Tamplin et al.
BMC GENOMICS (2008)
ER71 acts downstream of BMP, Notch, and Wnt signaling in blood and vessel progenitor specification
Dongjun Lee et al.
CELL STEM CELL (2008)
Mesp2 and Tbx6 cooperatively create periodic patterns coupled with the clock machinery during mouse somitogenesis
Masayuki Oginuma et al.
DEVELOPMENT (2008)
Expression of the hyaluronan receptor LYVE-1 is not restricted to the lymphatic vasculature; LYVE-1 is also expressed on embryonic blood vessels
Emma J. Gordon et al.
DEVELOPMENTAL DYNAMICS (2008)
Model-based Analysis of ChIP-Seq (MACS)
Yong Zhang et al.
GENOME BIOLOGY (2008)
Defining clusters from a hierarchical cluster tree: the Dynamic Tree Cut package for R
Peter Langfelder et al.
BIOINFORMATICS (2008)
Segmental border is defined by the key transcription factor Mesp2, by means of the suppression of Notch activity
Yumiko Saga
DEVELOPMENTAL DYNAMICS (2007)
The Slc35d3 gene, encoding an orphan nucleotide sugar transporter, regulates platelet-dense granules
Sreenivasulu Chintala et al.
BLOOD (2007)
Primitive erythropoiesis from mesodermal precursors expressing VE-cadherin, PECAM-1, Tie2, endoglin, and CD34 in the mouse embryo
Masatsugu Ema et al.
BLOOD (2006)
The allantois and chorion, when isolated before circulation or chorio-allantoic fusion, have hematopoietic potential
Brandon M. Zeigler et al.
DEVELOPMENT (2006)
A global role for EKLF in definitive and primitive erythropoiesis
D Hodge et al.
BLOOD (2006)
The Cdx4 mutation affects axial development and reveals an essential role of Cdx genes in the ontogenesis of the placental labyrinth in mice
J van Nes et al.
DEVELOPMENT (2006)
Derivation of mouse embryonic stem cells
Vitezslav Bryja et al.
NATURE PROTOCOLS (2006)
Hox genes specify vertebral types in the presomitic mesoderm
M Carapuço et al.
GENES & DEVELOPMENT (2005)
The erythroid phenotype of EKLF-null mice: Defects in hemoglobin metabolism and membrane stability
R Drissen et al.
MOLECULAR AND CELLULAR BIOLOGY (2005)
Loss of the extraembryonic ectoderm in Elf5 mutants leads to defects in embryonic patterning
M Donnison et al.
DEVELOPMENT (2005)
Cre-mediated excision of Fgf8 in the Tbx1 expression domain reveals a critical role for Fgf8 in cardiovascular development in the mouse
CB Brown et al.
DEVELOPMENTAL BIOLOGY (2004)
Loss of PGC-specific expression of the orphan nuclear receptor ERR-β results in reduction of germ cell number in mouse embryos
K Mitsunaga et al.
MECHANISMS OF DEVELOPMENT (2004)
Yolk sac-derived primitive erythroblasts enucleate during mammalian embryogenesis
PD Kingsley et al.
BLOOD (2004)
Investigation into a role for the primitive streak in development of the murine allantois
KM Downs et al.
DEVELOPMENT (2004)
Acquisition of Hox codes during gastrulation and axial elongation in the mouse embryo
S Forlani et al.
DEVELOPMENT (2003)
Expression of CD41 marks the initiation of definitive hematopoiesis in the mouse embryo
HKA Mikkola et al.
BLOOD (2003)
beta-Catenin regulates Cripto- and Wnt3-dependent gene expression programs in mouse axis and mesoderm formation
M Morkel et al.
DEVELOPMENT (2003)
Dynamic expression and essential functions of Hes7 in somite segmentation
Y Bessho et al.
GENES & DEVELOPMENT (2001)
Nodal signalling in the epiblast patterns the early mouse embryo
J Brennan et al.
NATURE (2001)
Mutations in Sox18 underlie cardiovascular and hair follicle defects in ragged mice
D Pennisi et al.
NATURE GENETICS (2000)
Quantitative expression of Oct-3/4 defines differentiation, dedifferentiation or self-renewal of ES cells
H Niwa et al.
NATURE GENETICS (2000)