4.7 Article

A nanozipper structured efficient FRET probe for ratiometric detection of ATP based on target-induced cycling amplification

Related references

Note: Only part of the references are listed.
Article Biophysics

Electrochemical enzyme-based blood ATP and lactate sensor for a rapid and straightforward evaluation of illness severity

Keine Nishiyama et al.

Summary: This study developed an integrated sensing system for measuring blood ATP and lactate levels, which showed good agreement with conventional methods. The system enables the straightforward measurement of ATP and lactate levels within a short time, making it a useful tool in the management of serious infectious diseases.

BIOSENSORS & BIOELECTRONICS (2022)

Article Biophysics

A genetically encoded fluorescent biosensor for monitoring ATP in living cells with heterobifunctional aptamers

Guoliang Zheng et al.

Summary: A novel label-free fluorescent turn-on biosensor for monitoring ATP in living bacterias and mammalian cells was developed, utilizing heterobifunctional aptamers with high sensitivity. A tandem method combining Broc-ATPs with 3 x F30 three-way junction scaffold was established to construct an intracellular biosensor for sensitive and specific imaging of ATP dynamics in mammalian cells.

BIOSENSORS & BIOELECTRONICS (2022)

Article Biophysics

Self-assembled DNA origami-based duplexed aptasensors combined with centrifugal filters for efficient and rechargeable ATP detection

Xiaojuan Wang et al.

Summary: This study demonstrated the construction of a DNA origami biosensor for precise localization of fluorescent aptamers and quantitative detection of adenosine triphosphate (ATP). The results showed successful synthesis of origami-aptamer arrays with excellent detection sensitivity and linear relationship for ATP quantification.

BIOSENSORS & BIOELECTRONICS (2022)

Article Biophysics

Dual-hairpin ligation amplification enabled ultra-sensitive and selective ATP detection for cancer monitor

Defeng Song et al.

Summary: In this study, an ultra-sensitive and selective ATP detection strategy was developed, which can detect ATP at concentrations as low as nanomolar levels and distinguish ATP from its analogues. The proposed strategy has great potential applications in cell metabolism and cancer diagnosis.

BIOSENSORS & BIOELECTRONICS (2022)

Article Chemistry, Analytical

A self-powered 3D DNA walking machine triggered by triple-helix molecular switch for microRNA imagining in living cells

Mei-Yao Zhou et al.

Summary: A novel self-powered 3D DNA walking machine triggered by triple-helix molecular switch has been developed for imaging miRNA-21 in living cells. This design enables autonomous motion without the need for external fuel DNA strands or protein enzymes, simplifying the experimental steps and improving efficiency. Additionally, this assay provides a new signal amplification strategy for evaluating intracellular miRNA levels.

SENSORS AND ACTUATORS B-CHEMICAL (2022)

Article Biophysics

Dual-hairpin ligation amplification enabled ultra-sensitive and selective ATP detection for cancer monitor

Defeng Song et al.

Summary: This article introduces a new strategy for detecting ATP, which can detect ATP with high sensitivity and selectivity in a wide range of concentrations. The strategy can also distinguish ATP from its analogues, and has potential applications in cell metabolism and cancer diagnosis.

BIOSENSORS & BIOELECTRONICS (2022)

Review Chemistry, Multidisciplinary

ATP-Driven Synthetic Supramolecular Assemblies: From ATP as a Template to Fuel

Ananya Mishra et al.

Summary: The article discusses the potential of ATP in driving the development of bio-inspired supramolecular systems with dynamic characteristics. It highlights the immense potential of ATP-fuelled designs in the synthesis of lifelike temporally programmable soft materials, while also addressing the existing dearth of ATP-driven systems for future challenges.

ANGEWANDTE CHEMIE-INTERNATIONAL EDITION (2021)

Article Chemistry, Multidisciplinary

Boric Acid-Fueled ATP Synthesis by FoF1 ATP Synthase Reconstituted in a Supramolecular Architecture

Xia Xu et al.

Summary: By using boric acid as fuel and choosing polyols to release locked protons, controlled proton gradients are established across the lipid membrane to drive ATP synthesis, enabling tunable ATP production.

ANGEWANDTE CHEMIE-INTERNATIONAL EDITION (2021)

Article Chemistry, Analytical

Enhancing the Sensitivity of DNA and Aptamer Probes in the Dextran/PEG Aqueous Two-Phase System

Qiaoshu Chen et al.

Summary: Increasing the local concentration of DNA-based probes can improve the sensitivity of biosensors. A classic aqueous two-phase system (ATPS) using water soluble polymers is studied as a method to enrich DNA probes, leading to enhanced detection limits in molecular beacon-based DNA detection systems.

ANALYTICAL CHEMISTRY (2021)

Article Chemistry, Applied

An fluorescence resonance energy transfer sensing platform based on signal amplification strategy of hybridization chain reaction and triplex DNA for the detection of Chloramphenicol in milk

Yubin Li et al.

Summary: An enzyme-free fluorescence resonance energy transfer (FRET) strategy based on triplex DNA and hybridization chain reaction amplification was established for sensitive detection of chloramphenicol (CAP) in milk. This method allows for accurate and rapid quantification of CAP, with a wide range of potential applications.

FOOD CHEMISTRY (2021)

Article Chemistry, Multidisciplinary

Effects of Weak Nonspecific Interactions with ATP on Proteins

Mayu Nishizawa et al.

Summary: ATP, a well-studied metabolite in living systems, interacts weakly but measurably with various proteins through noncovalent interactions, altering protein hydration and potentially providing temporary protection to protein surfaces. ATP is proposed to be a general nonspecific binder of proteins at physiological concentrations, forming oligomeric states via magnesium-chelating mechanisms. This metabolite-mediated protein surface protection could play a role in cellular processes.

JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2021)

Article Chemistry, Analytical

DNA nanolantern-based split aptamer probes for in situ ATP imaging in living cells and lighting up mitochondria

Ya-Xin Wang et al.

Summary: The DNA nanolantern-based split aptamer nanoprobes can accurately analyze ATP expression levels in living cells, showing good performance characteristics.

ANALYST (2021)

Article Chemistry, Analytical

Fluorescent Carbon Dots for in Situ Monitoring of Lysosomal ATP Levels

Xin Geng et al.

ANALYTICAL CHEMISTRY (2020)

Article Biochemistry & Molecular Biology

Forster resonance energy transfer for studying nucleic acids denaturation: A chemical and biological sciences laboratory experiment

Josue Carvalho et al.

BIOCHEMISTRY AND MOLECULAR BIOLOGY EDUCATION (2020)

Article Chemistry, Multidisciplinary

Cell-Surface-Anchored Ratiometric DNA Nanoswitch for Extracellular ATP Imaging

Jing Yuan et al.

ACS SENSORS (2019)

Article Chemistry, Analytical

A ratiometric fluorescent biosensor based on cascaded amplification strategy for ultrasensitive detection of kanamycin

Jiankang Deng et al.

SENSORS AND ACTUATORS B-CHEMICAL (2018)

Article Chemistry, Multidisciplinary

Genetically Encoded Fluorescent RNA Sensor for Ratiometric Imaging of MicroRNA in Living Tumor Cells

Zhan-Ming Ying et al.

JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2017)

Article Chemistry, Multidisciplinary

Enhanced Anticancer Efficacy by ATP-Mediated Liposomal Drug Delivery

Ran Mo et al.

ANGEWANDTE CHEMIE-INTERNATIONAL EDITION (2014)

Article Chemistry, Physical

Resonance Energy Transfer in DNA Duplexes Labeled with Localized Dyes

Paul D. Cunningham et al.

JOURNAL OF PHYSICAL CHEMISTRY B (2014)

Article Materials Science, Biomaterials

A novel aptameric nanobiosensor based on the self-assembled DNA-MoS2 nanosheet architecture for biomolecule detection

Jia Ge et al.

JOURNAL OF MATERIALS CHEMISTRY B (2014)

Article Chemistry, Multidisciplinary

Aptamer-Guided Caging for Selective Masking of Protein Domains

Falk Rohrbach et al.

ANGEWANDTE CHEMIE-INTERNATIONAL EDITION (2013)

Article Chemistry, Multidisciplinary

Biomolecular robotics for chemomechanically driven guest delivery fuelled by intracellular ATP

Shuvendu Biswas et al.

NATURE CHEMISTRY (2013)

Article Chemistry, Multidisciplinary

A Phenylboronate-Functionalized Polyion Complex Micelle for ATP-Triggered Release of siRNA

Mitsuru Naito et al.

ANGEWANDTE CHEMIE-INTERNATIONAL EDITION (2012)

Article Chemistry, Multidisciplinary

Amplified Fluorescence Aptamer-Based Sensors Using Exonuclease III for the Regeneration of the Analyte

Xiaoqing Liu et al.

CHEMISTRY-A EUROPEAN JOURNAL (2012)

Review Cell Biology

AMPK: a nutrient and energy sensor that maintains energy homeostasis

D. Grahame Hardie et al.

NATURE REVIEWS MOLECULAR CELL BIOLOGY (2012)

Editorial Material Biochemical Research Methods

A novel kinase-based ATP assay using molecular beacon

Changbei Ma et al.

ANALYTICAL BIOCHEMISTRY (2008)

Article Multidisciplinary Sciences

Orientation dependence in fluorescent energy transfer between Cy3 and Cy5 terminally attached to double-stranded nuclelic acids

Asif Iqbal et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2008)

Review Biochemistry & Molecular Biology

Mitochondria: More than just a powerhouse

Heidi M. McBride et al.

CURRENT BIOLOGY (2006)

Article Chemistry, Multidisciplinary

Orientation control of fluorescence resonance energy transfer using DNA as a helical scaffold

FD Lewis et al.

JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2005)

Article Multidisciplinary Sciences

ATP is a mediator of chemosensory transduction in the central nervous system

AV Gourine et al.

NATURE (2005)

Article Chemistry, Physical

Three-dimensional orientational colocalization of individual donor-acceptor pairs

CG Hübner et al.

JOURNAL OF CHEMICAL PHYSICS (2004)

Article Chemistry, Multidisciplinary

Donor/acceptor interactions in systematically modified RuII-OsII oligonucleotides

DJ Hurley et al.

JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2002)