4.7 Article

Genomewide single nucleotide polymorphism discovery in Atlantic salmon (Salmo salar): validation in wild and farmed American and European populations

Related references

Note: Only part of the references are listed.
Article Evolutionary Biology

Population genomic analyses of early-phase Atlantic Salmon (Salmo salar) domestication/captive breeding

Hannu Makinen et al.

EVOLUTIONARY APPLICATIONS (2015)

Article Biochemistry & Molecular Biology

The development and characterization of a 57K single nucleotide polymorphism array for rainbow trout

Y. Palti et al.

MOLECULAR ECOLOGY RESOURCES (2015)

Article Biotechnology & Applied Microbiology

Development and validation of a high density SNP genotyping array for Atlantic salmon (Salmo salar)

Ross D. Houston et al.

BMC GENOMICS (2014)

Article Biotechnology & Applied Microbiology

Detection of Quantitative Trait Loci (QTL) Related to Grilsing and Late Sexual Maturation in Atlantic Salmon (Salmo salar)

Alejandro P. Gutierrez et al.

MARINE BIOTECHNOLOGY (2014)

Article Biotechnology & Applied Microbiology

Cost-effective genome-wide estimation of allele frequencies from pooled DNA in Atlantic salmon (Salmo salar L.)

Mikhail Ozerov et al.

BMC GENOMICS (2013)

Article Biochemical Research Methods

Fast gapped-read alignment with Bowtie 2

Ben Langmead et al.

NATURE METHODS (2012)

Article Biochemical Research Methods

Genotype calling and mapping of multisite variants using an Atlantic salmon iSelect SNP array

Lars Gidskehaug et al.

BIOINFORMATICS (2011)

Article Biochemical Research Methods

The variant call format and VCFtools

Petr Danecek et al.

BIOINFORMATICS (2011)

Article Biotechnology & Applied Microbiology

The development and characterization of a 60K SNP chip for chicken

Martien A. M. Groenen et al.

BMC GENOMICS (2011)

Article Biochemistry & Molecular Biology

Generic genetic differences between farmed and wild Atlantic salmon identified from a 7K SNP-chip

Sten Karlsson et al.

MOLECULAR ECOLOGY RESOURCES (2011)

Article Mathematical & Computational Biology

SalmonDB: a bioinformatics resource for Salmo salar and Oncorhynchus mykiss

Alex Di Genova et al.

DATABASE-THE JOURNAL OF BIOLOGICAL DATABASES AND CURATION (2011)

Article Multidisciplinary Sciences

Development and Characterization of a High Density SNP Genotyping Assay for Cattle

Lakshmi K. Matukumalli et al.

PLOS ONE (2009)

Article Genetics & Heredity

PLINK: A tool set for whole-genome association and population-based linkage analyses

Shaun Purcell et al.

AMERICAN JOURNAL OF HUMAN GENETICS (2007)

Article Agriculture, Dairy & Animal Science

Genetic variation within and among domesticated Atlantic salmon broodstocks in British Columbia, Canada

RE Withler et al.

ANIMAL GENETICS (2005)

Article Biochemical Research Methods

A strategy for assembling the maize (Zea mays L.) genome

SJ Emrich et al.

BIOINFORMATICS (2004)

Article Biochemical Research Methods

Lucy 2: an interactive DNA sequence quality trimming and vector removal tool

S Li et al.

BIOINFORMATICS (2004)