Related references
Note: Only part of the references are listed.Binding of Disordered Peptides to Kelch: Insights from Enhanced Sampling Simulations
Trang Nhu Do et al.
JOURNAL OF CHEMICAL THEORY AND COMPUTATION (2016)
The auto-inhibitory state of Rho guanine nucleotide exchange factor ARHGEF5/TIM can be relieved by targeting its SH3 domain with rationally designed peptide aptamers
Ping He et al.
BIOCHIMIE (2015)
Self-Binding Peptides: Folding or Binding?
Chao Yang et al.
JOURNAL OF CHEMICAL INFORMATION AND MODELING (2015)
Structural and energetic insights into the intermolecular interaction among human leukocyte antigens, clinical hypersensitive drugs and antigenic peptides
Chao Yang et al.
MOLECULAR SIMULATION (2015)
Indirect Readout in Protein-Peptide Recognition: A Different Story from Classical Biomolecular Recognition
Hua Yu et al.
JOURNAL OF CHEMICAL INFORMATION AND MODELING (2014)
Autoinhibitory Structure of the WW Domain of HYPB/SETD2 Regulates Its Interaction with the Proline-Rich Region of Huntingtin
Yong-Guang Gao et al.
STRUCTURE (2014)
Computational Peptidology: A New and Promising Approach to Therapeutic Peptide Design
P. Zhou et al.
CURRENT MEDICINAL CHEMISTRY (2013)
The RCSB Protein Data Bank: new resources for research and education
Peter W. Rose et al.
NUCLEIC ACIDS RESEARCH (2013)
A Unified Conformational Selection and Induced Fit Approach to Protein-Peptide Docking
Mikael Trellet et al.
PLOS ONE (2013)
Structure and Intrinsic Disorder in Protein Autoinhibition
Travis Trudeau et al.
STRUCTURE (2013)
Specific Noncovalent Interactions at Protein-Ligand Interface: Implications for Rational Drug Design
P. Zhou et al.
CURRENT MEDICINAL CHEMISTRY (2012)
A Dynamic View of Domain-Motif Interactions
Eyal Akiva et al.
PLOS COMPUTATIONAL BIOLOGY (2012)
The INAD Scaffold Is a Dynamic, Redox-Regulated Modulator of Signaling in the Drosophila Eye
Wei Liu et al.
CELL (2011)
Druggability assessment of protein-protein interfaces
Jutta Wanner et al.
FUTURE MEDICINAL CHEMISTRY (2011)
Rosetta FlexPepDockab-initio: Simultaneous Folding, Docking and Refinement of Peptides onto Their Receptors
Barak Raveh et al.
PLOS ONE (2011)
Characterization of 14-3-3 Proteins from Cryptosporidium parvum
Stephen J. Brokx et al.
PLOS ONE (2011)
PDZ domains and their binding partners: structure, specificity, and modification
Ho-Jin Lee et al.
CELL COMMUNICATION AND SIGNALING (2010)
The Structural Basis of Peptide-Protein Binding Strategies
Nir London et al.
STRUCTURE (2010)
Configurational Entropy in Protein-Peptide Binding: Computational Study of Tsg101 Ubiquitin E2 Variant Domain with an HIV-Derived PTAP Nonapeptide
Benjamin J. Killian et al.
JOURNAL OF MOLECULAR BIOLOGY (2009)
Binding Mechanism of an SH3 Domain Studied by NMR and ITC
Jean-Philippe Demers et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2009)
Dynamic and Structural Characterization of a Bacterial FHA Protein Reveals a New Autoinhibition Mechanism
Philippe Barthe et al.
STRUCTURE (2009)
Mechanism of fast peptide recognition by SH3 domains
Mazen Ahmad et al.
ANGEWANDTE CHEMIE-INTERNATIONAL EDITION (2008)
Peptide-mediated interactions in biological systems: new discoveries and applications
Evangelia Petsalaki et al.
CURRENT OPINION IN BIOTECHNOLOGY (2008)
Structure of the human voltage-dependent anion channel
Monika Bayrhuber et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2008)
Dynamic scaffolding in a G protein-coupled signaling system
Prashant Mishra et al.
CELL (2007)
Conformational entropy in molecular recognition by proteins
Kendra King Frederick et al.
NATURE (2007)
Peptides mediating interaction networks: new leads at last
Victor Neduva et al.
CURRENT OPINION IN BIOTECHNOLOGY (2006)
Targeting protein-protein interactions by rational design: mimicry of protein surfaces
Steven Fletcher et al.
JOURNAL OF THE ROYAL SOCIETY INTERFACE (2006)
Scalable molecular dynamics with NAMD
JC Phillips et al.
JOURNAL OF COMPUTATIONAL CHEMISTRY (2005)
Systematic discovery of new recognition peptides mediating protein interaction networks
V Neduva et al.
PLOS BIOLOGY (2005)
Specificity and versatility of SH3 and other proline-recognition domains: structural basis and implications for cellular signal transduction
SSC Li
BIOCHEMICAL JOURNAL (2005)
Hydrophobic collapse in multidomain protein folding
RH Zhou et al.
SCIENCE (2004)
Entropy-enthalpy compensation in ionic interactions probed in a zinc finger peptide
CA Blasie et al.
BIOCHEMISTRY (2004)
Development and testing of a general amber force field
JM Wang et al.
JOURNAL OF COMPUTATIONAL CHEMISTRY (2004)
Structure and regulation of Src family kinases
TJ Boggon et al.
ONCOGENE (2004)