Related references
Note: Only part of the references are listed.Profiling of open chromatin in developing pig (Sus scrofa) muscle to identify regulatory regions
Mazdak Salavati et al.
G3-GENES GENOMES GENETICS (2022)
Dynamic 3D genome reorganization during development and metabolic stress of the porcine liver
Luxi Chen et al.
CELL DISCOVERY (2022)
Differences in liver microRNA profiling in pigs with low and high feed efficiency
Yuanxin Miao et al.
JOURNAL OF ANIMAL SCIENCE AND TECHNOLOGY (2022)
Human apolipoprotein A-II reduces atherosclerosis in knock-in rabbits
Tomonari Koike et al.
ATHEROSCLEROSIS (2021)
Pig genome functional annotation enhances the biological interpretation of complex traits and human disease
Zhangyuan Pan et al.
NATURE COMMUNICATIONS (2021)
Integrative ATAC-seq and RNA-seq Analysis of the Longissimus Muscle of Luchuan and Duroc Pigs
Weiwei Miao et al.
FRONTIERS IN NUTRITION (2021)
The landscape of chromatin accessibility in skeletal muscle during embryonic development in pigs
Jingwei Yue et al.
JOURNAL OF ANIMAL SCIENCE AND BIOTECHNOLOGY (2021)
Molecular Complexes at Euchromatin, Heterochromatin and Centromeric Chromatin
Olivia Morrison et al.
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES (2021)
A pig BodyMap transcriptome reveals diverse tissue physiologies and evolutionary dynamics of transcription
Long Jin et al.
NATURE COMMUNICATIONS (2021)
Regulation of active and quiescent somatic stem cells by Notch signaling
Risa Sueda et al.
DEVELOPMENT GROWTH & DIFFERENTIATION (2020)
Low birth weight influences the postnatal abundance and characteristics of satellite cell subpopulations in pigs
K. Stange et al.
SCIENTIFIC REPORTS (2020)
Chromatin replication and epigenetic cell memory
Kathleen R. Stewart-Morgan et al.
NATURE CELL BIOLOGY (2020)
Multiple Signaling Roles of CD3ε and Its Application in CAR-T Cell Therapy
Wei Wu et al.
CELL (2020)
A comparative analysis of chromatin accessibility in cattle, pig, and mouse tissues
Michelle M. Halstead et al.
BMC GENOMICS (2020)
Comparison of differential accessibility analysis strategies for ATAC-seq data
Paul Gontarz et al.
SCIENTIFIC REPORTS (2020)
RNA-Seq of Liver From Pigs Divergent in Feed Efficiency Highlights Shifts in Macronutrient Metabolism, Hepatic Growth and Immune Response
Justyna Horodyska et al.
FRONTIERS IN GENETICS (2019)
Beyond the Exome: The Non-coding Genome and Enhancers in Neurodevelopmental Disorders and Malformations of Cortical Development
Elena Perenthaler et al.
FRONTIERS IN CELLULAR NEUROSCIENCE (2019)
Metascape provides a biologist-oriented resource for the analysis of systems-level datasets
Yingyao Zhou et al.
NATURE COMMUNICATIONS (2019)
ATAC-seq reveals alterations in open chromatin in pancreatic islets from subjects with type 2 diabetes
Madhusudhan Bysani et al.
SCIENTIFIC REPORTS (2019)
Multi-species annotation of transcriptome and chromatin structure in domesticated animals
Sylvain Foissac et al.
BMC BIOLOGY (2019)
Chromatin accessibility and the regulatory epigenome
Sandy L. Klemm et al.
NATURE REVIEWS GENETICS (2019)
Lipid and glucose metabolism in hepatocyte cell lines and primary mouse hepatocytes: a comprehensive resource for in vitro studies of hepatic metabolism
Shilpa R. Nagarajan et al.
AMERICAN JOURNAL OF PHYSIOLOGY-ENDOCRINOLOGY AND METABOLISM (2019)
Liver proteomics unravel the metabolic pathways related to Feed Efficiency in beef cattle
Leydiana D. Fonseca et al.
SCIENTIFIC REPORTS (2019)
Development of the liver: Insights into organ and tissue morphogenesis
Elke A. Ober et al.
JOURNAL OF HEPATOLOGY (2018)
An improved ATAC-seq protocol reduces background and enables interrogation of frozen tissues
M. Ryan Corces et al.
NATURE METHODS (2017)
Drug Metabolism in the Liver
Omar Abdulhameed Almazroo et al.
CLINICS IN LIVER DISEASE (2017)
Fetal liver hematopoietic stem cell niches associate with portal vessels
Jalal A. Khan et al.
SCIENCE (2016)
Alterations in coagulation following major liver resection
S. V. Mallett et al.
ANAESTHESIA (2016)
Analysis of the porcine APOA2 gene expression in liver, polymorphism identification and association with fatty acid composition traits
M. Ballester et al.
ANIMAL GENETICS (2016)
Near-optimal probabilistic RNA-seq quantification
Nicolas L. Bray et al.
NATURE BIOTECHNOLOGY (2016)
Characterization of sarcoplasmic reticulum Ca2+ ATPase pumps in muscle of patients with myotonic dystrophy and with hypothyroid myopathy
V. Guglielmi et al.
NEUROMUSCULAR DISORDERS (2016)
deepTools2: a next generation web server for deep-sequencing data analysis
Fidel Ramirez et al.
NUCLEIC ACIDS RESEARCH (2016)
SERCA1 overexpression minimizes skeletal muscle damage in dystrophic mouse models
Davi A. G. Mazala et al.
AMERICAN JOURNAL OF PHYSIOLOGY-CELL PHYSIOLOGY (2015)
ChIPseeker: an R/Bioconductor package for ChIP peak annotation, comparison and visualization
Guangchuang Yu et al.
BIOINFORMATICS (2015)
Quadriceps muscle weakness and atrophy are associated with a differential epigenetic profile in advanced COPD
Ester Puig-Vilanova et al.
CLINICAL SCIENCE (2015)
Orchestrating liver development
Miriam Gordillo et al.
DEVELOPMENT (2015)
MEF2D Deficiency in Neonatal Cardiomyocytes Triggers Cell Cycle Re-entry and Programmed Cell Death in Vitro
Nelsa L. Estrella et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2015)
The MEME Suite
Timothy L. Bailey et al.
NUCLEIC ACIDS RESEARCH (2015)
Current status of pig liver xenotransplantation
Burcin Ekser et al.
INTERNATIONAL JOURNAL OF SURGERY (2015)
Global MEF2 target gene analysis in cardiac and skeletal muscle reveals novel regulation of DUSP6 by p38MAPK-MEF2 signaling
Stephanie Wales et al.
NUCLEIC ACIDS RESEARCH (2014)
Do Epigenetic Events Take Place in the Vastus Lateralis of Patients with Mild Chronic Obstructive Pulmonary Disease?
Ester Puig-Vilanova et al.
PLOS ONE (2014)
Epigenetic Mechanisms in Respiratory Muscle Dysfunction of Patients with Chronic Obstructive Pulmonary Disease
Ester Puig-Vilanova et al.
PLOS ONE (2014)
STAR: ultrafast universal RNA-seq aligner
Alexander Dobin et al.
BIOINFORMATICS (2013)
Transcriptional regulation of the Ikzf1 locus
Toshimi Yoshida et al.
BLOOD (2013)
Integrative Genomics Viewer (IGV): high-performance genomics data visualization and exploration
Helga Thorvaldsdottir et al.
BRIEFINGS IN BIOINFORMATICS (2013)
SERCA1 protein expression in muscle of patients with Brody disease and Brody syndrome and in cultured human muscle fibers
Valeria Guglielmi et al.
MOLECULAR GENETICS AND METABOLISM (2013)
Increased skeletal muscle-specific microRNA in the blood of patients with COPD
Anna Donaldson et al.
THORAX (2013)
The accessible chromatin landscape of the human genome
Robert E. Thurman et al.
NATURE (2012)
Fast gapped-read alignment with Bowtie 2
Ben Langmead et al.
NATURE METHODS (2012)
Identifying ChIP-seq enrichment using MACS
Jianxing Feng et al.
NATURE PROTOCOLS (2012)
Downregulation of the serum response factor/miR-1 axis in the quadriceps of patients with COPD
Amy Lewis et al.
THORAX (2012)
The pig: a model for human infectious diseases
Francois Meurens et al.
TRENDS IN MICROBIOLOGY (2012)
MEASURING REPRODUCIBILITY OF HIGH-THROUGHPUT EXPERIMENTS
Qunhua Li et al.
ANNALS OF APPLIED STATISTICS (2011)
Assigning roles to DNA regulatory motifs using comparative genomics
Fabian A. Buske et al.
BIOINFORMATICS (2010)
BEDTools: a flexible suite of utilities for comparing genomic features
Aaron R. Quinlan et al.
BIOINFORMATICS (2010)
Chromatin Remodeling around Nucleosome-Free Regions Leads to Repression of Noncoding RNA Transcription
Adam N. Yadon et al.
MOLECULAR AND CELLULAR BIOLOGY (2010)
Evidence for a new allele at the SERCA1 locus affecting pork meat quality in part through the imbalance of Ca2+ homeostasis
J. Chai et al.
MOLECULAR BIOLOGY REPORTS (2010)
GREAT improves functional interpretation of cis-regulatory regions
Cory Y. McLean et al.
NATURE BIOTECHNOLOGY (2010)
The Sequence Alignment/Map format and SAMtools
Heng Li et al.
BIOINFORMATICS (2009)
Selected physiologic compatibilities and incompatibilities between human and porcine organ systems
Zuhaib Ibrahim et al.
XENOTRANSPLANTATION (2006)
Pigs in sequence space:: A 0.66X coverage pig genome survey based on shotgun sequencing -: art. no. 70
R Wernersson et al.
BMC GENOMICS (2005)
Genome-wide midrange transcription profiles reveal expression level relationships in human tissue specification
I Yanai et al.
BIOINFORMATICS (2005)
Mitochondrial deficiency and cardiac sudden death in mice lacking the MEF2A transcription factor
FJ Naya et al.
NATURE MEDICINE (2002)
Coagulation disorders in liver disease
L Amitrano et al.
SEMINARS IN LIVER DISEASE (2002)