☆ 4.7 Review

Research Progress of Nucleic Acid Detection Technology for Genetically Modified Maize

INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES (2023)

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Efficient DNA Extraction Procedures for Processed Food Derivatives-a Critical Step to Ensure Quality for GMO Analysis

Monika Singh et al.

Summary: Extraction of DNA from food derivatives is crucial for detection of genetically modified organisms (GMOs), and suitable procedures are necessary to ensure DNA quality. This study reported procedures to extract detectable DNA from various food products, which can be efficiently employed for GMO testing and food authentication.

FOOD ANALYTICAL METHODS (2021)

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Article Medicine, Legal

Technical note: Polyvinylpyrrolidone (PVP) and proteinase-K improve the efficiency of DNA extraction from Japanese larch wood and PCR success rate

Byeong-Ju Lee et al.

Summary: The study demonstrated that the addition of PVP and proteinase-K significantly improves efficiency of DNA extraction from Japanese larch wood, leading to successful PCR amplification and preventing DNA damage, enabling identification of wood species and origin.

FORENSIC SCIENCE INTERNATIONAL (2021)

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Article Multidisciplinary Sciences

A Comparison of Genomic DNA Extraction Protocols in Artemisia annua L. for Large Scale Genetic Analyses Studies

Negar Valizadeh et al.

Summary: The CTAB method is suitable for extraction of high-quality genomic DNA from Artemisia anuua L., resulting in relatively high purity and clear polymorphic bands.

IRANIAN JOURNAL OF SCIENCE AND TECHNOLOGY TRANSACTION A-SCIENCE (2021)

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Article Chemistry, Analytical

A multiplex and regenerable surface plasmon resonance (MR-SPR) biosensor for DNA detection of genetically modified organisms

Na An et al.

Summary: Researchers have developed a multiplexed, regenerable, and real-time SPR biosensor for detecting GMOs, which has good specificity and sensitivity. The biosensor has a detection limit of 0.1 nM and can be stably regenerated over 100 times with good reproducibility.

TALANTA (2021)

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Article Multidisciplinary Sciences

Optimization of Loop-Mediated Isothermal Amplification (LAMP) reaction mixture for biosensor applications

Sumeyra Vural Kaymaz et al.

Summary: Genetically Modified (GM) foods are seen as the future of agriculture due to their increased production efficiency and improved functional properties for surviving global natural disasters and climate change. However, concerns about their adverse health and environmental effects, as well as evidence of transgene leakage to crops, have raised questions about their benefits and risks. This study developed a closed tube colorimetric GMO detection method based on Loop-Mediated Isothermal Amplification (LAMP) technique, which can be integrated into GMO-detection platforms. The durability of the LAMP mixture in test tubes showed that it could yield DNA amplicons for up to 3 days at room temperature and 6 days at 4 degrees Celsius.

METHODSX (2021)

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Article Biotechnology & Applied Microbiology

Development of stable transgenic maize plants tolerant for drought by manipulating ABA signaling through Agrobacterium-mediated transformation

Sridevi Muppala et al.

Summary: To meet the increasing demand for food, revolutionary crop improvement programs are being implemented to achieve higher yields. Introducing stress-tolerant genes through transgenic technology, such as nced and rpk, into plants can help them cope with abiotic stress. In this study, maize plants were successfully transformed with nced and rpk genes, which play crucial roles in ABA signaling, to develop stress-tolerant plants.

JOURNAL OF GENETIC ENGINEERING AND BIOTECHNOLOGY (2021)

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Review Biochemistry & Molecular Biology

Advancing organelle genome transformation and editing for crop improvement

Shengchun Li et al.

Summary: Plant cells contain three organelles (nucleus, plastids, and mitochondria) with DNA, and plastid transformation is an attractive platform for generating transgenic plants. While plastid genome editing has not been commercialized, progress has been made in modifying mitochondrial genes, though genetic transformation of higher plant mitochondria has not yet been successful.

PLANT COMMUNICATIONS (2021)

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Article Multidisciplinary Sciences

Targeted DNA insertion in plants

Oliver Xiaoou Dong et al.

Summary: This paper reviews approaches of targeted DNA insertion in plant genomes, discusses current technical challenges, and describes promising applications of targeted DNA insertion for crop genetic improvement.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2021)

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Article Food Science & Technology

Identification and quantitation of genetically modified (GM) ingredients in maize, rice, soybean and wheat-containing retail foods and feeds in Turkey

Bihter Avsar et al.

JOURNAL OF FOOD SCIENCE AND TECHNOLOGY-MYSORE (2020)

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Article Biochemical Research Methods

Cross-priming isothermal amplification combined with nucleic acid test strips for detection of meat species

Fangyuan Zheng et al.

ANALYTICAL BIOCHEMISTRY (2020)

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Article Food Science & Technology

Surveying genetically modified maize in foods marketed in Algeria

Zahia Brara et al.

FOOD CONTROL (2020)

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Article Agriculture, Multidisciplinary

Mini-Disk Capillary Array Coupling with LAMP for Visual Detection of Multiple Nucleic Acids using Genetically Modified Organism Analysis as an Example

Rong Li et al.

JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY (2020)

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Review Biotechnology & Applied Microbiology

Novel nucleic acid detection strategies based on CRISPR-Cas systems: From construction to application

Chu-shu Zhu et al.

BIOTECHNOLOGY AND BIOENGINEERING (2020)

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Review Chemistry, Analytical

Application of Microfluidic Chip Technology in Food Safety Sensing

Hongwei Gao et al.

SENSORS (2020)

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Article Chemistry, Analytical

Single universal primer recombinase polymerase amplification-based lateral flow biosensor (SUP-RPA-LFB) for multiplex detection of genetically modified maize

Kai Li et al.

ANALYTICA CHIMICA ACTA (2020)

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Article Food Science & Technology

Validation of a modified CTAB method for DNA extraction from protein-rich maize feedstuffs

Nele Matthes et al.

JOURNAL OF CONSUMER PROTECTION AND FOOD SAFETY (2020)

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Article Engineering, Electrical & Electronic

Portable Low-Cost Fluorescence Reader for LFA Measurements

Arttu Huttunen et al.

IEEE SENSORS JOURNAL (2020)

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Review Biochemical Research Methods

Tutorial: design and fabrication of nanoparticle-based lateral-flow immunoassays

Claudio Parolo et al.

NATURE PROTOCOLS (2020)

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Article Agriculture, Dairy & Animal Science

Rapid on-site detection of Salmonella pullorum based on lateral flow nucleic acid assay combined with recombinase polymerase amplification reaction

Rui Liu et al.

POULTRY SCIENCE (2020)

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Article Multidisciplinary Sciences

Quantification of colorimetric isothermal amplification on the smartphone and its open-source app for point-of-care pathogen detection

Huynh Quoc Nguyen et al.

SCIENTIFIC REPORTS (2020)

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Article Biochemical Research Methods

dPCR vs. qPCR: The role of Poisson statistics at low concentrations

Joel Tellinghuisen

ANALYTICAL BIOCHEMISTRY (2020)

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Article Biochemical Research Methods

Reciprocating flow-assisted nucleic acid purification using a finger-actuated microfluidic device

Juhwan Park et al.

LAB ON A CHIP (2020)

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Article Biochemical Research Methods

Performance assessment of digital PCR for the quantification of GM-maize and GM-soya events

Geoffrey Cottenet et al.

ANALYTICAL AND BIOANALYTICAL CHEMISTRY (2019)

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Article Biochemical Research Methods

Development of an innovative and sustainable one-step method for rapid plant DNA isolation for targeted PCR using magnetic ionic liquids

Arianna Marengo et al.

PLANT METHODS (2019)

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Article Chemistry, Analytical

An Automated and Miniaturized Rotating-Disk Device for Rapid Nucleic Acid Extraction

Rui Tong et al.

MICROMACHINES (2019)

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Article Nanoscience & Nanotechnology

Detection of Nucleic Acids and Prevention of Carryover Contamination Using Cross-Priming Amplification Combined with Nanoparticles-Based Biosensor and Antarctic Thermal Sensitive Uracil-DNA-Glycosylase

Yi Wang et al.

JOURNAL OF BIOMEDICAL NANOTECHNOLOGY (2019)

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Article Chemistry, Multidisciplinary

Label-Free Cross-Priming Amplification Coupled With Endonuclease Restriction and Nanoparticles-Based Biosensor for Simultaneous Detection of Nucleic Acids and Prevention of Carryover Contamination

Yi Wang et al.

FRONTIERS IN CHEMISTRY (2019)

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Article Biochemistry & Molecular Biology

Identification of T-DNA Insertion Site and Flanking Sequence of a Genetically Modified Maize Event IE09S034 Using Next-Generation Sequencing Technology

Kiran Siddique et al.

MOLECULAR BIOTECHNOLOGY (2019)

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Article Biochemical Research Methods

A phenol/chloroform-free method to extract nucleic acids from recalcitrant, woody tropical species for gene expression and sequencing

Francois F. Barbier et al.

PLANT METHODS (2019)

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Article Chemistry, Analytical

A novel electrochemical DNA biosensor for transgenic soybean detection based on triple signal amplification

Dongli Chen et al.

ANALYTICA CHIMICA ACTA (2019)

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Article Chemistry, Applied

Digital PCR as an effective tool for GMO quantification in complex matrices

Alexandra Bogozalec Kosir et al.

FOOD CHEMISTRY (2019)

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Article Biochemical Research Methods

Development of SYBR Green real-time PCR and nested RT-PCR for the detection of Potato Mop-top Virus (PMTV) and viral surveys in Progeny tubers derived from PMTV infected Potato tubers

Hualan Zhou et al.

MOLECULAR AND CELLULAR PROBES (2019)

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Article Biochemistry & Molecular Biology

A modified SDS-based DNA extraction method from raw soybean

Yimiao Xia et al.

BIOSCIENCE REPORTS (2019)

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Review Food Science & Technology

Loop-mediated isothermal amplification assays: Rapid and efficient diagnostics for genetically modified crops

Monika Singh et al.

FOOD CONTROL (2019)

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Article Biochemistry & Molecular Biology

Bio-On-Magnetic-Beads (BOMB): Open platform for high-throughput nucleic acid extraction and manipulation

Phil Oberacker et al.

PLOS BIOLOGY (2019)

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Review Biochemical Research Methods

Critical assessment of digital PCR for the detection and quantification of genetically modified organisms

Tigst Demeke et al.

ANALYTICAL AND BIOANALYTICAL CHEMISTRY (2018)

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Article Chemistry, Analytical

Ferrodrop Dose-Optimized Digital Quantification of Biomolecules in Low-Volume Samples

Soroush Kahkeshani et al.

ANALYTICAL CHEMISTRY (2018)

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Article Food Science & Technology

Detection of DNA in Highly Processed Foods

Masahiro Kishine et al.

FOOD HYGIENE AND SAFETY SCIENCE (2018)

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Article Chemistry, Analytical

A novel biosensor based on DNA hybridization for ultrasensitive detection of NOS terminator gene sequences

Yanhua He et al.

SENSORS AND ACTUATORS B-CHEMICAL (2018)

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Article Chemistry, Analytical

Cross-priming amplification-based lateral flow strip as a novel tool for rapid on-site detection of wild-type pseudorabies virus

Xing-Yu Meng et al.

SENSORS AND ACTUATORS B-CHEMICAL (2018)

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Review Chemistry, Analytical

Recombinase polymerase amplification: Basics, applications and recent advances

Ivan Magrina Lobato et al.

TRAC-TRENDS IN ANALYTICAL CHEMISTRY (2018)

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Article Medicine, General & Internal

Comparison of the PANArray HPV Genotyping Chip Test with the Cobas 4800 HPV and Hybrid Capture 2 Tests for Detection of HPV in ASCUS Women

Eun Young Ki et al.

YONSEI MEDICAL JOURNAL (2018)

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Article Biotechnology & Applied Microbiology

Magnetic beads, a particularly effective novel method for extraction of NGS-ready DNA from macroalgae

Antoine Fort et al.

ALGAL RESEARCH-BIOMASS BIOFUELS AND BIOPRODUCTS (2018)

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Article Food Science & Technology

Detection of DNA in Highly Processed Foods

Masahiro Kishine et al.

FOOD HYGIENE AND SAFETY SCIENCE (2018)

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Article Biotechnology & Applied Microbiology

ARGOS8 variants generated by CRISPR-Cas9 improve maize grain yield under field drought stress conditions

Jinrui Shi et al.

PLANT BIOTECHNOLOGY JOURNAL (2017)

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Review Medical Laboratory Technology

Recombinase Polymerase Amplification for Diagnostic Applications

Rana K. Daher et al.

CLINICAL CHEMISTRY (2016)

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Article Chemistry, Applied

Assessment of a direct hybridization microarray strategy for comprehensive monitoring of genetically modified organisms (GMOs)

Aydin Turkec et al.

FOOD CHEMISTRY (2016)

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Article Biochemical Research Methods

A centrifugal direct recombinase polymerase amplification (direct-RPA) microdevice for multiplex and real-time identification of food poisoning bacteria

Goro Choi et al.

LAB ON A CHIP (2016)

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Article Biotechnology & Applied Microbiology

Development of a Rapid Point-of-Use DNA Test for the Screening of Genuity® Roundup Ready 2 Yield® Soybean in Seed Samples

Dilip Chandu et al.

BIOMED RESEARCH INTERNATIONAL (2016)

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Article Microbiology

A Modified SDS-Based DNA Extraction Method for High Quality Environmental DNA from Seafloor Environments

Vengadesh Perumal Natarajan et al.

FRONTIERS IN MICROBIOLOGY (2016)

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Article Chemistry, Analytical

Isothermal strand displacement amplification (iSDA): a rapid and sensitive method of nucleic acid amplification for point-of-carediagnosis

Bhushan J. Toley et al.

ANALYST (2015)

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Article Food Science & Technology

Event-specific analytical methods for six genetically modified maize events using visual and real-time loop-mediated isothermal amplification

Rajesh K. Bhoge et al.

FOOD CONTROL (2015)

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Article Multidisciplinary Sciences

Comparison of four digital PCR platforms for accurate quantification of DNA copy number of a certified plasmid DNA reference material

Lianhua Dong et al.

SCIENTIFIC REPORTS (2015)

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Article Food Science & Technology

DNA extraction techniques compared for accurate detection of genetically modified organisms (GMOs) in maize food and feed products

Aydin Turkec et al.

JOURNAL OF FOOD SCIENCE AND TECHNOLOGY-MYSORE (2015)

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Review Chemistry, Analytical

Biosensors as 21st Century Technology for Detecting Genetically Modified Organisms in Food and Feed

Mary A. Arugula et al.

ANALYTICAL CHEMISTRY (2014)

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Review Chemistry, Analytical

Extraction, amplification and detection of DNA inmicrofluidic chip-based assays

Jinbo Wu et al.

MICROCHIMICA ACTA (2014)

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Article Food Science & Technology

Comparison of DNA Extraction Methods forSweet Corn and Processed Sweet Corns

Reona TAKABATAKE et al.

Food Hygiene and Safety Science (2013)

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Article Food Science & Technology

Loop-mediated isothermal amplification (LAMP) method for detection of genetically modified maize T25

Junyi Xu et al.

FOOD SCIENCE & NUTRITION (2013)

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Article Multidisciplinary Sciences

Cross Priming Amplification: Mechanism and Optimization for Isothermal DNA Amplification

Gaolian Xu et al.

SCIENTIFIC REPORTS (2012)

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Article Food Science & Technology

Real-time PCR-based detection and quantification of genetically modified maize in processed feeds commercialised in Malaysia

Jasbeer Kaur et al.

FOOD CONTROL (2010)

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Article Food Science & Technology

Applicability of a novel reference molecule suitable for event-specific detections of maize NK603 based on both 5′ and 3′ flanking sequences

Xiang Li et al.

FOOD CONTROL (2010)

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Article Biotechnology & Applied Microbiology

QCM-based DNA biosensor for detection of genetically modified organisms (GMOs)

Irem Karamollaoglu et al.

BIOCHEMICAL ENGINEERING JOURNAL (2009)

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Article Biochemistry & Molecular Biology

Genomic DNA amplification by the multiple displacement amplification (MDA) method

Roger S. Lasken

BIOCHEMICAL SOCIETY TRANSACTIONS (2009)

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Article Agronomy

Development of a seed DNA-based genotyping system for marker-assisted selection in maize

Shibin Gao et al.

MOLECULAR BREEDING (2008)

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Article Biochemistry & Molecular Biology

NAIMA: target amplification strategy allowing quantitative on-chip detection of GMOs

Dany Morisset et al.

NUCLEIC ACIDS RESEARCH (2008)

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Article Biochemical Research Methods

Protocol: A high-throughput DNA extraction system suitable for conifers

Stanislav Bashalkhanov et al.

PLANT METHODS (2008)

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Article Biochemical Research Methods

A new PCR-CGE (size and color) method for simultaneous detection of genetically modified maize events

Anna Nadal et al.

ELECTROPHORESIS (2006)

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Article Biochemistry & Molecular Biology

DNA detection using recombination proteins

Olaf Piepenburg et al.

PLOS BIOLOGY (2006)

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Article Biochemical Research Methods

A modified protocol for rapid DNA isolation from plant tissues using cetyltrimethylammonium bromide

G. C. Allen et al.

NATURE PROTOCOLS (2006)

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Article Biochemical Research Methods

Optimization and design of oligonucleotide setup for strand displacement amplification

S Ehses et al.

JOURNAL OF BIOCHEMICAL AND BIOPHYSICAL METHODS (2005)

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Review Toxicology

DNA microarray technology in nutraceutical and food safety

YL Liu-Stratton et al.

TOXICOLOGY LETTERS (2004)

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Article Biochemistry & Molecular Biology

Helicase-dependent isothermal DNA amplification

M Vincent et al.

EMBO REPORTS (2004)

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Article Biophysics

Quartz crystal microbalance (QCM) affinity biosensor for genetically modified organisms (GMOs) detection

I Mannelli et al.

BIOSENSORS & BIOELECTRONICS (2003)

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Article Biochemical Research Methods

Scaling up the ligase chain reaction-based approach to gene synthesis

FM Chalmers et al.

BIOTECHNIQUES (2001)

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Article Biochemical Research Methods

An evaluation of chelex-based DNA purification protocols for the typing of lactic acid bacteria

G Giraffa et al.

JOURNAL OF MICROBIOLOGICAL METHODS (2000)

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Article Biochemistry & Molecular Biology

Loop-mediated isothermal amplification of DNA

Tsugunori Notomi et al.

NUCLEIC ACIDS RESEARCH (2000)

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