4.5 Article

Cyclic di-peptide in situ inhibited protein-aggregation

Journal

BIOORGANIC & MEDICINAL CHEMISTRY LETTERS
Volume 91, Issue -, Pages -

Publisher

PERGAMON-ELSEVIER SCIENCE LTD
DOI: 10.1016/j.bmcl.2023.129379

Keywords

Peptide cyclization; Cyclic di -peptide; Inhibitor peptides; Aggregated peptides; Protein aggregation; Amyloid; Acyl migration

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An increasing number of neurodegenerative diseases are caused by protein misfolding and accumulation in the brain. Different diseases result from the deposition of misfolded proteins with a ss-sheet conformation, such as Huntington's disease, transmissible prion encephalopathies, and Alzheimer's disease. A potential therapeutic approach is the use of rationally designed peptide inhibitors to inhibit protein aggregation. The designed inhibitor peptides show promising results in inhibiting the aggregation of related peptides.
An increasing number of neurodegenerative diseases seem to be associated with protein misfolding that often leads to misfolded protein aggregates with a ss-sheet conformation and accumulation in the brain which directly contributes to or modulates the associated pathology. Protein aggregation diseases like Huntington's disease results from the deposition of aggregated huntingtin proteins within the nucleus, transmissible prion encephalopathies occur due to extracellular deposition of pathogenic prion proteins whereas Alzheimer's disease from the accumulation of both extracellular ss-amyloid and intracellular hyperphosphorylated tau protein aggregates. In the generalized purpose, we have taken the core sequence of amyloid-ss (responsible for its aggregation) as the aggregating peptide (AP). Among the various emerging therapeutic approaches against aggregation-related degenerative diseases such as diminishing the monomeric precursor protein, inhibiting aggregation, or blocking aggregation-induced cellular toxicity pathways, we focussed on the strategy based on the inhibition of protein aggregation using rationally designed peptide inhibitors comprising both the recognition and ss-breaking component in the sequence. The O & RARR; N acyl migration concept was used to form cyclic peptide in situ for the generation of a bent unit which may act as disruption moiety for the inhibition process. The kinetics of aggregation was characterized by various biophysical tools (ThT-assay, TEM, CD, and FTIR). Results implied that the designed inhibitor peptides (IP) might be valuable to inhibit all the related aggregated peptides.

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