Soil Fungal Diversity and Ecology Assessed Using DNA Metabarcoding along a Deglaciated Chronosequence at Clearwater Mesa, James Ross Island, Antarctic Peninsula

Simple Summary We characterized the fungal organisms present in soils at James Ross Island, north-east Antarctic Peninsula, using DNA metabarcoding. Taxa detected included members of the widespread phyla Ascomycota, Basidiomycota and Mortierellomycota. Additionally, the uncommon phyla Chytridiomycota, Rozellomycota, Monoblepharomycota, Zoopagomycota and Basidiobolomycota were detected. Unknown fungi and taxa identified at generic and specific levels dominated the assemblages. The fungal sequence assemblages displayed high diversity and richness, and moderate dominance, and included taxa known to play saprophytic, pathogenic and symbiotic functions. Soils of Clearwater Mesa contain a complex fungal community, including fungal groups considered rare in Antarctica, dominated by cold-adapted cosmopolitan, endemic, saprotrophic and phytopathogenic taxa. We studied the fungal diversity present in soils sampled along a deglaciated chronosequence from para- to periglacial conditions on James Ross Island, north-east Antarctic Peninsula, using DNA metabarcoding. A total of 88 amplicon sequence variants (ASVs) were detected, dominated by the phyla Ascomycota, Basidiomycota and Mortierellomycota. The uncommon phyla Chytridiomycota, Rozellomycota, Monoblepharomycota, Zoopagomycota and Basidiobolomycota were detected. Unknown fungi identified at higher hierarchical taxonomic levels (Fungal sp. 1, Fungal sp. 2, Spizellomycetales sp. and Rozellomycotina sp.) and taxa identified at generic and specific levels (Mortierella sp., Pseudogymnoascus sp., Mortierella alpina, M. turficola, Neoascochyta paspali, Penicillium sp. and Betamyces sp.) dominated the assemblages. In general, the assemblages displayed high diversity and richness, and moderate dominance. Only 12 of the fungal ASVs were detected in all chronosequence soils sampled. Sequences representing saprophytic, pathogenic and symbiotic fungi were detected. Based on the sequence diversity obtained, Clearwater Mesa soils contain a complex fungal community, including the presence of fungal groups generally considered rare in Antarctica, with dominant taxa recognized as cold-adapted cosmopolitan, endemic, saprotrophic and phytopathogenic fungi. Clearwater Mesa ecosystems are impacted by the effects of regional climatic changes, and may provide a natural observatory to understand climate change effects over time.

Automated summary

In this study, the fungal organisms present in soils at James Ross Island, north-east Antarctic Peninsula, were characterized using DNA metabarcoding. The detected taxa included widely-distributed phyla such as Ascomycota, Basidiomycota, and Mortierellomycota, as well as uncommon phyla such as Chytridiomycota, Rozellomycota, Monoblepharomycota, Zoopagomycota, and Basidiobolomycota. Unknown fungi and taxa identified at different taxonomic levels dominated the assemblages. The fungal sequence assemblages exhibited high diversity and richness, and moderate dominance, with the presence of saprophytic, pathogenic, and symbiotic fungi.