Related references
Note: Only part of the references are listed.Fast and accurate long-read assembly with wtdbg2
Jue Ruan et al.
NATURE METHODS (2020)
A Giant Genome for a Giant Crayfish (Cherax quadricarinatus) With Insights Into cox1 Pseudogenes in Decapod Genomes
Mun Hua Tan et al.
FRONTIERS IN GENETICS (2020)
Canu: scalable and accurate long-read assembly via adaptive k-mer weighting and repeat separation
Sergey Koren et al.
GENOME RESEARCH (2017)
De novo assembly of the Aedes aegypti genome using Hi-C yields chromosome-length scaffolds
Olga Dudchenko et al.
SCIENCE (2017)
SOAPnuke: a MapReduce acceleration-supported software for integrated quality control and preprocessing of high-throughput sequencing data
Yuxin Chen et al.
GIGASCIENCE (2017)
GenomeScope: fast reference-free genome profiling from short reads
Gregory W. Vurture et al.
BIOINFORMATICS (2017)
Transcript-level expression analysis of RNA-seq experiments with HISAT, StringTie and Ballgown
Mihaela Pertea et al.
NATURE PROTOCOLS (2016)
Juicer Provides a One-Click System for Analyzing Loop-Resolution Hi-C Experiments
Neva C. Durand et al.
CELL SYSTEMS (2016)
Juicebox Provides a Visualization System for Hi-C Contact Maps with Unlimited Zoom
Neva C. Durand et al.
CELL SYSTEMS (2016)
BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs
Felipe A. Simao et al.
BIOINFORMATICS (2015)
HISAT: a fast spliced aligner with low memory requirements
Daehwan Kim et al.
NATURE METHODS (2015)
HiC-Pro: an optimized and flexible pipeline for Hi-C data processing
Nicolas Servant et al.
GENOME BIOLOGY (2015)
Pilon: An Integrated Tool for Comprehensive Microbial Variant Detection and Genome Assembly Improvement
Bruce J. Walker et al.
PLOS ONE (2014)
A Review of the Culture and Diseases of Redclaw Crayfish Cherax quadricarinatus (Von Martens 1868)
Imad P. Saoud et al.
JOURNAL OF THE WORLD AQUACULTURE SOCIETY (2013)
Identification of novel transcripts in annotated genomes using RNA-Seq
Adam Roberts et al.
BIOINFORMATICS (2011)
Full-length transcriptome assembly from RNA-Seq data without a reference genome
Manfred G. Grabherr et al.
NATURE BIOTECHNOLOGY (2011)
The sequence and de novo assembly of the giant panda genome
Ruiqiang Li et al.
NATURE (2010)
Infernal 1.0: inference of RNA alignments
Eric P. Nawrocki et al.
BIOINFORMATICS (2009)
Fast and accurate short read alignment with Burrows-Wheeler transform
Heng Li et al.
BIOINFORMATICS (2009)
A Review of the Primer Approximation Multiplex PCR (PAMP) Technique for Detecting Large Scale Cancer Genomic Lesions
Kedsuda Apichonbancha et al.
Current Bioinformatics (2009)
NOMENCLATURE FOR CENTROMERIC POSITION ON CHROMOSOMES
ALBERT LEVAN et al.
HEREDITAS (2009)
Recent advances in crustacean genomics
Jonathon H. Stillman et al.
INTEGRATIVE AND COMPARATIVE BIOLOGY (2008)
MetaReg: a platform for modeling, analysis and visualization of biological systems using large-scale experimental data
Igor Ulitsky et al.
GENOME BIOLOGY (2008)
AUGUSTUS:: ab initio prediction of alternative transcripts
Mario Stanke et al.
NUCLEIC ACIDS RESEARCH (2006)
The costs of intersexuality: a crustacean perspective
AT Ford et al.
MARINE BIOLOGY (2004)
BLAST: at the core of a powerful and diverse set of sequence analysis tools
S McGinnis et al.
NUCLEIC ACIDS RESEARCH (2004)
TigrScan and GlimmerHMM:: two open source ab initio eukaryotic gene-finders
WH Majoros et al.
BIOINFORMATICS (2004)
GeneWise and genomewise
E Birney et al.
GENOME RESEARCH (2004)
High frequency and large number of polymorphic Microsatellites in cultured shrimp, Penaeus (Litopenaeus) vannamei [Crustacea:Decapoda]
D Meehan et al.
MARINE BIOTECHNOLOGY (2003)
Share Paper
