Related references
Note: Only part of the references are listed.Entropy sorting of single-cell RNA sequencing data reveals the inner cell mass in the human pre-implantation embryo
Arthur Radley et al.
STEM CELL REPORTS (2023)
Mosaic cis-regulatory evolution drives transcriptional partitioning of HERVH endogenous retrovirus in the human embryo
Thomas A. Carter et al.
ELIFE (2022)
The essential but enigmatic regulatory role of HERVH in pluripotency
Corinne E. Sexton et al.
TRENDS IN GENETICS (2022)
Taming transposable elements in vertebrates: from epigenetic silencing to domestication
Miguel Vasconcelos Almeida et al.
TRENDS IN GENETICS (2022)
Inherent mosaicism and extensive mutation of human placentas
Tim H. H. Coorens et al.
NATURE (2021)
Integrated pseudotime analysis of human pre-implantation embryo single-cell transcriptomes reveals the dynamics of lineage specification
Dimitri Meistermann et al.
CELL STEM CELL (2021)
Cleavage-embryo genes and transposable elements are regulated by histone variant H2A.X
Kai-yi Sun et al.
JOURNAL OF REPRODUCTION AND DEVELOPMENT (2021)
Evolutionary entanglement of mobile genetic elements and host defence systems: guns for hire
Eugene V. Koonin et al.
NATURE REVIEWS GENETICS (2020)
Maximizing the ovarian reserve in mice by evading LINE-1 genotoxicity
Marla E. Tharp et al.
NATURE COMMUNICATIONS (2020)
Single-cell sequencing of primate preimplantation embryos reveals chromosome elimination via cellular fragmentation and blastomere exclusion
Brittany L. Daughtry et al.
GENOME RESEARCH (2019)
Hominoid-Specific Transposable Elements and KZFPs Facilitate Human Embryonic Genome Activation and Control Transcription in Naive Human ESCs
Julien Pontis et al.
CELL STEM CELL (2019)
The architecture of intra-organism mutation rate variation in plants
Long Wang et al.
PLOS BIOLOGY (2019)
PGC1β Regulates Breast Tumor Growth and Metastasis by SREBP1-Mediated HKDC1 Expression
Xiaoli Chen et al.
FRONTIERS IN ONCOLOGY (2019)
RNA-seq as a tool for evaluating human embryo competence
Abigail F. Groff et al.
GENOME RESEARCH (2019)
Transcriptionally active HERV-H retrotransposons demarcate topologically associating domains in human pluripotent stem cells
Yanxiao Zhang et al.
NATURE GENETICS (2019)
A LINE1-Nucleolin Partnership Regulates Early Development and ESC Identity
Michelle Percharde et al.
CELL (2018)
Functional Dissection of the Enhancer Repertoire in Human Embryonic Stem Cells
Tahsin Stefan Barakat et al.
CELL STEM CELL (2018)
Integrating single-cell transcriptomic data across different conditions, technologies, and species
Andrew Butler et al.
NATURE BIOTECHNOLOGY (2018)
Chromatin analysis in human early development reveals epigenetic transition during ZGA
Jingyi Wu et al.
NATURE (2018)
Inhibition of LINE-1 Retrotransposition by Capsaicin
Yuki Nishikawa et al.
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES (2018)
The transcription factors TFE3 and TFEB amplify p53 dependent transcriptional programs in response to DNA damage
Eutteum Jeong et al.
ELIFE (2018)
Engineered LINE-1 retrotransposition in nondividing human neurons
Angela Macia et al.
GENOME RESEARCH (2017)
LINE-1 activation after fertilization regulates global chromatin accessibility in the early mouse embryo
Joanna W. Jachowicz et al.
NATURE GENETICS (2017)
Reversed graph embedding resolves complex single-cell trajectories
Xiaojie Qiu et al.
NATURE METHODS (2017)
Differences between germline and somatic mutation rates in humans and mice
Brandon Milholland et al.
NATURE COMMUNICATIONS (2017)
IFITM1 suppresses expression of human endogenous retroviruses in human embryonic stem cells
Yudong Fu et al.
FEBS OPEN BIO (2017)
Pluripotency and the endogenous retrovirus HERVH: Conflict or serendipity?
Zsuzsanna Izsvak et al.
BIOESSAYS (2016)
destiny: diffusion maps for large-scale single cell data in R
Philipp Angerer et al.
BIOINFORMATICS (2016)
Transcriptome Encyclopedia of Early Human Development
Anna Sahakyan et al.
CELL (2016)
Single-Cell RNA-Seq Reveals Lineage and X Chromosome Dynamics in Human Preimplantation Embryos
Sophie Petropoulos et al.
CELL (2016)
3D Chromosome Regulatory Landscape of Human Pluripotent Cells
Xiong Ji et al.
CELL STEM CELL (2016)
Naive Human Pluripotent Cells Feature a Methylation Landscape Devoid of Blastocyst or Germline Memory
William A. Pastor et al.
CELL STEM CELL (2016)
Molecular Criteria for Defining the Naive Human Pluripotent State
Thorold W. Theunissen et al.
Cell Stem Cell (2016)
A developmental coordinate of pluripotency among mice, monkeys and humans
Tomonori Nakamura et al.
NATURE (2016)
Isolation and cultivation of naive-like human pluripotent stem cells based on HERVH expression
Jichang Wang et al.
NATURE PROTOCOLS (2016)
The Paradox of p53: What, How, and Why?
Yael Aylon et al.
COLD SPRING HARBOR PERSPECTIVES IN MEDICINE (2016)
A Single-Cell Transcriptomic Map of the Human and Mouse Pancreas Reveals Inter- and Intra-cell Population Structure
Maayan Baron et al.
CELL SYSTEMS (2016)
Highly Parallel Genome-wide Expression Profiling of Individual Cells Using Nanoliter Droplets
Evan Z. Macosko et al.
CELL (2015)
Dynamic Transcription of Distinct Classes of Endogenous Retroviral Elements Marks Specific Populations of Early Human Embryonic Cells
Jonathan Goeke et al.
CELL STEM CELL (2015)
A global reference for human genetic variation
David M. Altshuler et al.
NATURE (2015)
Spatial reconstruction of single-cell gene expression data
Rahul Satija et al.
NATURE BIOTECHNOLOGY (2015)
Association between p53 Arg72Pro polymorphism and recurrent pregnancy loss: an updated systematic review and meta-analysis
Hui Chen et al.
REPRODUCTIVE BIOMEDICINE ONLINE (2015)
Resetting Transcription Factor Control Circuitry toward Ground-State Pluripotency in Human
Yasuhiro Takashima et al.
CELL (2014)
A Role for Retrotransposon LINE-1 in Fetal Oocyte Attrition in Mice
Safia Malki et al.
DEVELOPMENTAL CELL (2014)
Topologically associating domains are stable units of replication-timing regulation
Benjamin D. Pope et al.
NATURE (2014)
Primate-specific endogenous retrovirus-driven transcription defines naive-like stem cells
Jichang Wang et al.
NATURE (2014)
The retrovirus HERVH is a long noncoding RNA required for human embryonic stem cell identity
Xinyi Lu et al.
NATURE STRUCTURAL & MOLECULAR BIOLOGY (2014)
Dynamic regulation of human endogenous retroviruses mediates factor-induced reprogramming and differentiation potential
Mari Ohnuki et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2014)
Single-Cell RNA-Seq Reveals Dynamic, Random Monoallelic Gene Expression in Mammalian Cells
Qiaolin Deng et al.
SCIENCE (2014)
8.2% of the Human Genome Is Constrained: Variation in Rates of Turnover across Functional Element Classes in the Human Lineage
Chris M. Rands et al.
PLOS GENETICS (2014)
Myc-driven endogenous cell competition in the early mammalian embryo
Cristina Claveria et al.
NATURE (2013)
Single-cell RNA-Seq profiling of human preimplantation embryos and embryonic stem cells
Liying Yan et al.
NATURE STRUCTURAL & MOLECULAR BIOLOGY (2013)
Active human retrotransposons: variation and disease
Dustin C. Hancks et al.
CURRENT OPINION IN GENETICS & DEVELOPMENT (2012)
Modeling the evolution of ETV6-RUNX1-induced B-cell precursor acute lymphoblastic leukemia in mice
Louise van der Weyden et al.
BLOOD (2011)
Zscan4 regulates telomere elongation and genomic stability in ES cells
Michal Zalzman et al.
NATURE (2010)
Transposable elements have rewired the core regulatory network of human embryonic stem cells
Galih Kunarso et al.
NATURE GENETICS (2010)
Somatic expression of LINE-1 elements in human tissues
Victoria P. Belancio et al.
NUCLEIC ACIDS RESEARCH (2010)
Rapid, low-input, low-bias construction of shotgun fragment libraries by high-density in vitro transposition
Andrew Adey et al.
GENOME BIOLOGY (2010)
L1 retrotransposition occurs mainly in embryogenesis and creates somatic mosaicism
Hiroki Kano et al.
GENES & DEVELOPMENT (2009)
p53 responsive elements in human retrotransposons
C. R. Harris et al.
ONCOGENE (2009)
Evolution of the mammalian transcription factor binding repertoire via transposable elements
Guillaume Bourque et al.
GENOME RESEARCH (2008)
Aneuploidy and early human embryo development
Gayane Ambartsumyan et al.
HUMAN MOLECULAR GENETICS (2008)
L1 retrotransposition can occur early in human embryonic development
Jose A. J. M. van den Hurk et al.
HUMAN MOLECULAR GENETICS (2007)
Adjusting batch effects in microarray expression data using empirical Bayes methods
W. Evan Johnson et al.
BIOSTATISTICS (2007)
Which transposable elements are active in the human genome?
Ryan E. Mills et al.
TRENDS IN GENETICS (2007)
Antiviral potency of APOBEC proteins does not correlate with cytidine deamination
Kate N. Bishop et al.
JOURNAL OF VIROLOGY (2006)
Early lineage segregation between epiblast and primitive endoderm in mouse blastocysts through the Grb2-MAPK pathway
Claire Chazaud et al.
DEVELOPMENTAL CELL (2006)
The human LINE-1 retrotransposon creates DNA double-strand breaks
SL Gasior et al.
JOURNAL OF MOLECULAR BIOLOGY (2006)
Apoptotic processes during mammalian preimplantation development
D Fabian et al.
THERIOGENOLOGY (2005)
Somatic mosaicism in neuronal precursor cells mediated by L1 retrotransposition
AR Muotri et al.
NATURE (2005)
Retrotransposition-competent human LINE-1 induces apoptosis in cancer cells with intact p53
A Haoudi et al.
JOURNAL OF BIOMEDICINE AND BIOTECHNOLOGY (2004)
DNA determination mediates innate immunity to retroviral infection
RS Harris et al.
CELL (2003)
Hot L1s account for the bulk of retrotransposition in the human population
B Brouha et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2003)
The codon 72 polymorphic variants of p53 have markedly different apoptotic potential
P Dumont et al.
NATURE GENETICS (2003)
Viruses and apoptosis
BJ Thomson
INTERNATIONAL JOURNAL OF EXPERIMENTAL PATHOLOGY (2001)
Initial sequencing and analysis of the human genome
ES Lander et al.
NATURE (2001)