Related references
Note: Only part of the references are listed.Copper intrauterine device increases vaginal concentrations of inflammatory anaerobes and depletes lactobacilli compared to hormonal options in a randomized trial
Bryan P. Brown et al.
NATURE COMMUNICATIONS (2023)
Microbiota regulation of viral infections through interferon signaling
Nurul I. Wirusanti et al.
TRENDS IN MICROBIOLOGY (2022)
Prevalent human papillomavirus infection increases the risk of HIV acquisition in African women: advancing the argument for human papillomavirus immunization
Gui Liu et al.
AIDS (2022)
HPV infection alters vaginal microbiome through down-regulating host mucosal innate peptides used by Lactobacilli as amino acid sources
Alizee Lebeau et al.
NATURE COMMUNICATIONS (2022)
The gut virome: A new microbiome component in health and disease
Zhirui Cao et al.
EBIOMEDICINE (2022)
Association between Cervical Microbiota and HPV: Could This Be the Key to Complete Cervical Cancer Eradication?
Eliano Cascardi et al.
BIOLOGY-BASEL (2022)
Lactobacillus crispatus M247 oral administration: Is it really an effective strategy in the management of papillomavirus-infected women?
Miriam Dellino et al.
INFECTIOUS AGENTS AND CANCER (2022)
Communications Is Time for Care: An Italian Monocentric Survey on Human Papillomavirus (HPV) Risk Information as Part of Cervical Cancer Screening
Miriam Dellino et al.
JOURNAL OF PERSONALIZED MEDICINE (2022)
Cenote-Taker 2 democratizes virus discovery and sequence annotation
Michael J. Tisza et al.
VIRUS EVOLUTION (2021)
Presence and Persistence of Putative Lytic and Temperate Bacteriophages in Vaginal Metagenomes from South African Adolescents
Anna-Ursula Happel et al.
VIRUSES-BASEL (2021)
Interactive Tree Of Life (iTOL) v5: an online tool for phylogenetic tree display and annotation
Ivica Letunic et al.
NUCLEIC ACIDS RESEARCH (2021)
The vaginal microbiota, human papillomavirus and cervical dysplasia: a systematic review and network meta-analysis
J. Norenhag et al.
BJOG-AN INTERNATIONAL JOURNAL OF OBSTETRICS AND GYNAECOLOGY (2020)
Association of the eukaryotic vaginal virome with prophylactic antibiotic exposure and reproductive outcomes in a subfertile population undergoing in vitro fertilisation: a prospective exploratory study
A. M. Eskew et al.
BJOG-AN INTERNATIONAL JOURNAL OF OBSTETRICS AND GYNAECOLOGY (2020)
Impact of Hormonal Contraceptives on Cervical T-helper 17 Phenotype and Function in Adolescents: Results from a Randomized, Crossover Study Comparing Long-acting Injectable Norethisterone Oenanthate (NET-EN), Combined Oral Contraceptive Pills, and Combined Contraceptive Vaginal Rings
Iyaloo N. Konstantinus et al.
CLINICAL INFECTIOUS DISEASES (2020)
Association of HPV35 with cervical carcinogenesis among women of African ancestry: Evidence of viral-host interaction with implications for disease intervention
Maisa Pinheiro et al.
INTERNATIONAL JOURNAL OF CANCER (2020)
Multi-Infection Patterns and Co-infection Preference of 27 Human Papillomavirus Types Among 137,943 Gynecological Outpatients Across China
Guangdong Liao et al.
FRONTIERS IN ONCOLOGY (2020)
Characterization of the Vaginal DNA Virome in Health and Dysbiosis
Rasmus Riemer Jakobsen et al.
VIRUSES-BASEL (2020)
An open‐label, randomized crossover study to evaluate the acceptability and preference for contraceptive options in female adolescents, 15 to 19 years of age in Cape Town, as a proxy for HIV prevention methods (UChoose)
Katherine Gill et al.
Journal of the International AIDS Society (2020)
Molecular epidemiology of human papillomavirus among HIV infected women in developing countries: systematic review and meta-analysis
Agajie Likie Bogale et al.
VIROLOGY JOURNAL (2020)
Hormonal contraception alters vaginal microbiota and cytokines in South African adolescents in a randomized trial
Christina Balle et al.
NATURE COMMUNICATIONS (2020)
HPV infection and the genital cytokine milieu in women at high risk of HIV acquisition
Lenine J. P. Liebenberg et al.
NATURE COMMUNICATIONS (2019)
The Evolving Facets of Bacterial Vaginosis: Implications for HIV Transmission
Lyle R. McKinnon et al.
AIDS RESEARCH AND HUMAN RETROVIRUSES (2019)
Vaginal dysbiosis and the risk of human papillomavirus and cervical cancer: systematic review and meta-analysis
Nele Brusselaers et al.
AMERICAN JOURNAL OF OBSTETRICS AND GYNECOLOGY (2019)
HIV incidence rates in adolescent girls and young women in sub-Saharan Africa
Salim S. Abdool Karim et al.
LANCET GLOBAL HEALTH (2019)
DIABLO: an integrative approach for identifying key molecular drivers from multi-omics assays
Amrit Singh et al.
BIOINFORMATICS (2019)
Discovery, characterisation and genomic variation of six novel Gammapapillomavirus types from penile swabs in South Africa
Alltalents T. Murahwa et al.
PAPILLOMAVIRUS RESEARCH (2019)
The vaginal eukaryotic DNA virome and preterm birth
Kristine M. Wylie et al.
AMERICAN JOURNAL OF OBSTETRICS AND GYNECOLOGY (2018)
The metagenome of the female upper reproductive tract
Fei Li et al.
GIGASCIENCE (2018)
Human Papillomavirus Vaccine Introduction in South Africa: Implementation Lessons From an Evaluation of the National School-Based Vaccination Campaign
Sinead Delany-Moretlwe et al.
GLOBAL HEALTH-SCIENCE AND PRACTICE (2018)
Microbial Composition Predicts Genital Tract Inflammation and Persistent Bacterial Vaginosis in South African Adolescent Females
Katie Lennard et al.
INFECTION AND IMMUNITY (2018)
The Papillomavirus Episteme: a major update to the papillomavirus sequence database
Koenraad Van Doorslaer et al.
NUCLEIC ACIDS RESEARCH (2017)
Lactobacillus-Deficient Cervicovaginal Bacterial Communities Are Associated with Increased HIV Acquisition in Young South African Women
Christina Gosmann et al.
IMMUNITY (2017)
Association of HPV infection and clearance with cervicovaginal immunology and the vaginal microbiota
B. Shannon et al.
MUCOSAL IMMUNOLOGY (2017)
Genital Inflammation and the Risk of HIV Acquisition in Women
Lindi Masson et al.
CLINICAL INFECTIOUS DISEASES (2015)
Prevalence and genotype distribution of HPV infection among women in Ningbo, China
Hang Hong et al.
INTERNATIONAL JOURNAL OF GYNECOLOGY & OBSTETRICS (2015)
Fitting Linear Mixed-Effects Models Using lme4
Douglas Bates et al.
JOURNAL OF STATISTICAL SOFTWARE (2015)
Trimmomatic: a flexible trimmer for Illumina sequence data
Anthony M. Bolger et al.
BIOINFORMATICS (2014)
Metagenomic analysis of double-stranded DNA viruses in healthy adults
Kristine M. Wylie et al.
BMC BIOLOGY (2014)
Human papillomavirus prevalence and type distribution in invasive cervical cancer in sub-Saharan Africa
Lynette Denny et al.
INTERNATIONAL JOURNAL OF CANCER (2014)
SDT: A Virus Classification Tool Based on Pairwise Sequence Alignment and Identity Calculation
Brejnev Muhizi Muhire et al.
PLOS ONE (2014)
Comprehensive profiling of the vaginal microbiome in HIV positive women using massive parallel semiconductor sequencing
Adam Ameur et al.
SCIENTIFIC REPORTS (2014)
Probiotics enhance the clearance of human papillomavirus-related cervical lesions: a prospective controlled pilot study
Veronique Verhoeven et al.
EUROPEAN JOURNAL OF CANCER PREVENTION (2013)
Prevalence and viral load of 51 genital human papillomavirus types and three subtypes
Markus Schmitt et al.
INTERNATIONAL JOURNAL OF CANCER (2013)
MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability
Kazutaka Katoh et al.
MOLECULAR BIOLOGY AND EVOLUTION (2013)
SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing
Anton Bankevich et al.
JOURNAL OF COMPUTATIONAL BIOLOGY (2012)
Prevalence and Associations of Genital Ulcer and Urethral Pathogens in Men Presenting With Genital Ulcer Syndrome to Primary Health Care Clinics in South Africa
David A. Lewis et al.
SEXUALLY TRANSMITTED DISEASES (2012)
ProtTest 3: fast selection of best-fit models of protein evolution
Diego Darriba et al.
BIOINFORMATICS (2011)
New Algorithms and Methods to Estimate Maximum-Likelihood Phylogenies: Assessing the Performance of PhyML 3.0
Stephane Guindon et al.
SYSTEMATIC BIOLOGY (2010)
Classification of papillomaviruses (PVs) based on 189 PV types and proposal of taxonomic amendments
Hans-Ulrich Bernard et al.
VIROLOGY (2010)
Cell-Mediated Immune Responses to Human Papillomavirus 16 E6 and E7 Antigens as Measured by Interferon Gamma Enzyme-Linked Immunospot in Women With Cleared or Persistent Human Papillomavirus Infection
Sepideh Farhat et al.
INTERNATIONAL JOURNAL OF GYNECOLOGICAL CANCER (2009)
Cytoscape: A software environment for integrated models of biomolecular interaction networks
P Shannon et al.
GENOME RESEARCH (2003)