Related references
Note: Only part of the references are listed.The defense island repertoire of the Escherichia coli pan-genome
Dina H. Hochhauser et al.
PLOS GENETICS (2023)
Novel integrative elements and genomic plasticity in ocean ecosystems
Thomas Hackl et al.
CELL (2023)
Escherichia coli SymE is a DNA-binding protein that can condense the nucleoid
Mary K. Thompson et al.
MOLECULAR MICROBIOLOGY (2022)
Bacterial gasdermins reveal an ancient mechanism of cell death
Alex G. Johnson et al.
SCIENCE (2022)
Phages and their satellites encode hotspots of antiviral systems
Francois Rousset et al.
CELL HOST & MICROBE (2022)
Systematic and quantitative view of the antiviral arsenal of prokaryotes
Florian Tesson et al.
NATURE COMMUNICATIONS (2022)
mobileOG-db: a Manually Curated Database of Protein Families Mediating the Life Cycle of Bacterial Mobile Genetic Elements
Connor L. Brown et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2022)
Bacteriophages benefit from mobilizing pathogenicity islands encoding immune systems against competitors
Alfred Fillol-Salom et al.
CELL (2022)
An expanded arsenal of immune systems that protect bacteria from phages
Adi Millman et al.
CELL HOST & MICROBE (2022)
A functional selection reveals previously undetected anti-phage defence systems in the E. coli pangenome
Christopher N. Vassallo et al.
NATURE MICROBIOLOGY (2022)
Bacterial origins of human cell-autonomous innate immune mechanisms
Tanita Wein et al.
NATURE REVIEWS IMMUNOLOGY (2022)
Rapid evolutionary turnover of mobile genetic elements drives bacterial resistance to phages
Fatima Aysha Hussain et al.
SCIENCE (2021)
Temporal shifts in antibiotic resistance elements govern phage-pathogen conflicts
Kristen N. LeGault et al.
SCIENCE (2021)
Diverse enzymatic activities mediate antiviral immunity in prokaryotes
Linyi Gao et al.
SCIENCE (2020)
Diversity and classification of cyclic-oligonucleotide-based anti-phage signalling systems
Adi Millman et al.
NATURE MICROBIOLOGY (2020)
Defining the core essential genome of Pseudomonas aeruginosa
Bradley E. Poulsen et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2019)
Cyclic GMP-AMP signalling protects bacteria against viral infection
Daniel Cohen et al.
NATURE (2019)
Systematic discovery of antiphage defense systems in the microbial pangenome
Shany Doron et al.
SCIENCE (2018)
MMseqs2 enables sensitive protein sequence searching for the analysis of massive data sets
Martin Steinegger et al.
NATURE BIOTECHNOLOGY (2017)
Integrative and conjugative elements and their hosts: composition, distribution and organization
Jean Cury et al.
NUCLEIC ACIDS RESEARCH (2017)
Flexible genomic islands as drivers of genome evolution
Francisco Rodriguez-Valera et al.
CURRENT OPINION IN MICROBIOLOGY (2016)
BREX is a novel phage resistance system widespread in microbial genomes
Tamara Goldfarb et al.
EMBO JOURNAL (2015)
REBASE-a database for DNA restriction and modification: enzymes, genes and genomes
Richard J. Roberts et al.
NUCLEIC ACIDS RESEARCH (2015)
MacSyFinder: A Program to Mine Genomes for Molecular Systems with an Application to CRISPR-Cas Systems
Sophie S. Abby et al.
PLOS ONE (2014)
Ter-dependent stress response systems: novel pathways related to metal sensing, production of a nucleoside-like metabolite, and DNA-processing
Vivek Anantharaman et al.
MOLECULAR BIOSYSTEMS (2012)
Divergently overlapping cis-encoded antisense RNA regulating toxin-antitoxin systems from E-coli hok/sok, ldr/rdl, symE/symR
Mitsuoki Kawano
RNA BIOLOGY (2012)
Defense Islands in Bacterial and Archaeal Genomes and Prediction of Novel Defense Systems
Kira S. Makarova et al.
JOURNAL OF BACTERIOLOGY (2011)
BLAST plus : architecture and applications
Christiam Camacho et al.
BMC BIOINFORMATICS (2009)
Genomic islands are dynamic, ancient integrative elements in bacterial evolution
E. Fidelma Boyd et al.
TRENDS IN MICROBIOLOGY (2009)
CRISPRFinder: a web tool to identify clustered regularly interspaced short palindromic repeats
Ibtissem Grissa et al.
NUCLEIC ACIDS RESEARCH (2007)
tDNA locus polymorphism and ecto-chromosomal DNA insertion hot-spots are related to the phylogenetic group of Escherichia coli strains
Pierre Germon et al.
MICROBIOLOGY-SGM (2007)
Cytoscape: A software environment for integrated models of biomolecular interaction networks
P Shannon et al.
GENOME RESEARCH (2003)
Integration sites for genetic elements in prokaryotic tRNA and tmRNA genes: sublocation preference of integrase subfamilies
KP Williams
NUCLEIC ACIDS RESEARCH (2002)