Related references
Note: Only part of the references are listed.Ghost Lineages Highly Influence the Interpretation of Introgression Tests
Theo Tricou et al.
SYSTEMATIC BIOLOGY (2022)
Ghost lineages can invalidate or even reverse findings regarding gene flow
Theo Tricou et al.
PLOS BIOLOGY (2022)
Isolating live cell clones from barcoded populations using CRISPRa-inducible reporters
Christian Umkehrer et al.
NATURE BIOTECHNOLOGY (2021)
Bidirectional Genetic Control of Phenotypic Heterogeneity and Its Implication for Cancer Drug Resistance
Ning Mo et al.
MOLECULAR BIOLOGY AND EVOLUTION (2021)
Single-cell lineages reveal the rates, routes, and drivers of metastasis in cancer xenografts
Jeffrey J. Quinn et al.
SCIENCE (2021)
Mapping single-cell-resolution cell phylogeny reveals cell population dynamics during organ development
Kehui Liu et al.
NATURE METHODS (2021)
ESTIMATION OF CELL LINEAGE TREES BY MAXIMUM-LIKELIHOOD PHYLOGENETICS
Jean Feng et al.
ANNALS OF APPLIED STATISTICS (2021)
Allele-specific single-cell RNA sequencing reveals different architectures of intrinsic and extrinsic gene expression noises
Mengyi Sun et al.
NUCLEIC ACIDS RESEARCH (2020)
Alignment of Cell Lineage Trees Elucidates Genetic Programs for the Development and Evolution of Cell Types
Meng Yuan et al.
ISCIENCE (2020)
Genome editing with CRISPR-Cas nucleases, base editors, transposases and prime editors
Andrew V. Anzalone et al.
NATURE BIOTECHNOLOGY (2020)
Contribution of RNA Degradation to Intrinsic and Extrinsic Noise in Gene Expression
Antoine Baudrimont et al.
CELL REPORTS (2019)
Atlas of Subcellular RNA Localization Revealed by APEX-Seq
Furqan M. Fazal et al.
CELL (2019)
Concepts and limitations for learning developmental trajectories from single cell genomics
Sophie Tritschler et al.
DEVELOPMENT (2019)
Empirical mean-noise fitness landscapes reveal the fitness impact of gene expression noise
Jorn M. Schmiedel et al.
NATURE COMMUNICATIONS (2019)
Chromosome-wide co-fluctuation of stochastic gene expression in mammalian cells
Mengyi Sun et al.
PLOS GENETICS (2019)
Comparative Analysis of Droplet-Based Ultra-High-Throughput Single-Cell RNA-Seq Systems
Xiannian Zhang et al.
MOLECULAR CELL (2019)
CORUM: the comprehensive resource of mammalian protein complexes2019
Madalina Giurgiu et al.
NUCLEIC ACIDS RESEARCH (2019)
Integrating single-cell transcriptomic data across different conditions, technologies, and species
Andrew Butler et al.
NATURE BIOTECHNOLOGY (2018)
Simultaneous single-cell profiling of lineages and cell types in the vertebrate brain
Bushra Raj et al.
NATURE BIOTECHNOLOGY (2018)
Division rate, cell size and proteome allocation: impact on gene expression noise and implications for the dynamics of genetic circuits
Francois Bertaux et al.
ROYAL SOCIETY OPEN SCIENCE (2018)
RNA velocity of single cells
Gioele La Manno et al.
NATURE (2018)
Large-scale reconstruction of cell lineages using single-cell readout of transcriptomes and CRISPR-Cas9 barcodes by scGESTALT
Bushra Raj et al.
NATURE PROTOCOLS (2018)
An efficient cumate-inducible system for procyclic and bloodstream form Trypanosoma brucei
Feng-Jun Li et al.
MOLECULAR AND BIOCHEMICAL PARASITOLOGY (2017)
Massively parallel digital transcriptional profiling of single cells
Grace X. Y. Zheng et al.
NATURE COMMUNICATIONS (2017)
Single-Cell RNA-Seq Reveals Lineage and X Chromosome Dynamics in Human Preimplantation Embryos
Sophie Petropoulos et al.
CELL (2016)
Grp94 Protein Delivers γ-Aminobutyric Acid Type A (GABAA) Receptors to Hrd1 Protein-mediated Endoplasmic Reticulum-associated Degradation
Xiao-Jing Di et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2016)
Optimized sgRNA design to maximize activity and minimize off-target effects of CRISPR-Cas9
John G. Doench et al.
NATURE BIOTECHNOLOGY (2016)
The origin and evolution of cell types
Detlev Arendt et al.
NATURE REVIEWS GENETICS (2016)
Whole-organism lineage tracing by combinatorial and cumulative genome editing
Aaron McKenna et al.
SCIENCE (2016)
A microfluidic platform enabling single-cell RNA-seq of multigenerational lineages
Robert J. Kimmerling et al.
NATURE COMMUNICATIONS (2016)
The Genomic Landscape of Position Effects on Protein Expression Level and Noise in Yeast
Xiaoshu Chen et al.
CELL SYSTEMS (2016)
Transcriptional Bursting Explains the Noise-Versus-Mean Relationship in mRNA and Protein Levels
Roy D. Dar et al.
PLOS ONE (2016)
The Regulatory Landscape of Lineage Differentiation in a Metazoan Embryo
Zhuo Du et al.
DEVELOPMENTAL CELL (2015)
Selection on noise constrains variation in a eukaryotic promoter
Brian P. H. Metzger et al.
NATURE (2015)
CD8+ T cell diversification by asymmetric cell division Response
Janilyn Arsenio et al.
NATURE IMMUNOLOGY (2015)
CD8+ T cell diversification by asymmetric cell division
Michael Flossdorf et al.
NATURE IMMUNOLOGY (2015)
The statistical geometry of transcriptome divergence in cell-type evolution and cancer
Cong Liang et al.
NATURE COMMUNICATIONS (2015)
De Novo Inference of Systems-Level Mechanistic Models of Development from Live-Imaging-Based Phenotype Analysis
Zhuo Du et al.
CELL (2014)
Characterization of the Grp94/OS-9 Chaperone-Lectin Complex
Paul M. Seidler et al.
JOURNAL OF MOLECULAR BIOLOGY (2014)
Early specification of CD8+ T lymphocyte fates during adaptive immunity revealed by single-cell gene-expression analyses
Janilyn Arsenio et al.
NATURE IMMUNOLOGY (2014)
Differential protein occupancy profiling of the mRNA transcriptome
Markus Schueler et al.
GENOME BIOLOGY (2014)
Biological Consequences and Advantages of Asymmetric Bacterial Growth
David T. Kysela et al.
ANNUAL REVIEW OF MICROBIOLOGY, VOL 67 (2013)
Cumate-Inducible Gene Expression System for Sphingomonads and Other Alphaproteobacteria
Andreas Kaczmarczyk et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2013)
Nothing in Biology Makes Sense Except in the Light of Evolution
Theodosius Dobzhansky
AMERICAN BIOLOGY TEACHER (2013)
Balancing noise and plasticity in eukaryotic gene expression
Djordje Bajic et al.
BMC GENOMICS (2012)
Fast gapped-read alignment with Bowtie 2
Ben Langmead et al.
NATURE METHODS (2012)
Using Gene Expression Noise to Understand Gene Regulation
Brian Munsky et al.
SCIENCE (2012)
phytools: an R package for phylogenetic comparative biology (and other things)
Liam J. Revell
METHODS IN ECOLOGY AND EVOLUTION (2012)
Mitochondrial Variability as a Source of Extrinsic Cellular Noise
Iain G. Johnston et al.
PLOS COMPUTATIONAL BIOLOGY (2012)
FLASH: fast length adjustment of short reads to improve genome assemblies
Tanja Magoc et al.
BIOINFORMATICS (2011)
Non-genetic heterogeneity from stochastic partitioning at cell division
Dann Huh et al.
NATURE GENETICS (2011)
The evolution of the worldwide leaf economics spectrum
Lisa A. Donovan et al.
TRENDS IN ECOLOGY & EVOLUTION (2011)
Functional roles for noise in genetic circuits
Avigdor Eldar et al.
NATURE (2010)
Quantifying E-coli Proteome and Transcriptome with Single-Molecule Sensitivity in Single Cells
Yuichi Taniguchi et al.
SCIENCE (2010)
Protein quality control in the ER: The recognition of misfolded proteins
Pekka Maattanen et al.
SEMINARS IN CELL & DEVELOPMENTAL BIOLOGY (2010)
Connecting Variability in Global Transcription Rate to Mitochondrial Variability
Ricardo Pires das Neves et al.
PLOS BIOLOGY (2010)
Nature, Nurture, or Chance: Stochastic Gene Expression and Its Consequences
Arjun Raj et al.
CELL (2008)
Transcriptome-wide noise controls lineage choice in mammalian progenitor cells
Hannah H. Chang et al.
NATURE (2008)
OS-9 and GRP94 deliver mutant α1-antitrypsin to the Hrd1-SEL1L ubiquitin ligase complex for ERAD
John C. Christianson et al.
NATURE CELL BIOLOGY (2008)
Increase in tracheal investment with beetle size supports hypothesis of oxygen limitation on insect gigantism
Alexander Kaiser et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2007)
Asymmetric T lymphocyte division in the initiation of adaptive immune responses
John T. Chang et al.
SCIENCE (2007)
Stochastic mRNA synthesis in mammalian cells
Arjun Raj et al.
PLOS BIOLOGY (2006)
Human cell type diversity, evolution, development, and classification with special reference to cells derived from the neural crest
Matthew K. Vickaryous et al.
BIOLOGICAL REVIEWS (2006)
A novel algorithm and web-based tool for comparing two alternative phylogenetic trees
TMW Nye et al.
BIOINFORMATICS (2006)
Real-time kinetics of gene activity in individual bacteria
I Golding et al.
CELL (2005)
BiNGO: a Cytoscape plugin to assess overrepresentation of Gene Ontology categories in Biological Networks
S Maere et al.
BIOINFORMATICS (2005)
MUSCLE: multiple sequence alignment with high accuracy and high throughput
RC Edgar
NUCLEIC ACIDS RESEARCH (2004)
Phylogenetic comparative analysis: A modeling approach for adaptive evolution
MA Butler et al.
AMERICAN NATURALIST (2004)
Control of stochasticity in eukaryotic gene expression
JM Raser et al.
SCIENCE (2004)
Noise minimization in eukaryotic gene expression
HB Fraser et al.
PLOS BIOLOGY (2004)
Cytoscape: A software environment for integrated models of biomolecular interaction networks
P Shannon et al.
GENOME RESEARCH (2003)
Intrinsic and extrinsic contributions to stochasticity in gene expression
PS Swain et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2002)
Share Paper
