Related references
Note: Only part of the references are listed.CFTR mRNAs with nonsense codons are degraded by the SMG6-mediated endonucleolytic decay pathway
Edward J. Sanderlin et al.
NATURE COMMUNICATIONS (2022)
Molecular profiling of individual FDA-approved clinical drugs identifies modulators of nonsense-mediated mRNA decay
Jingrong Zhao et al.
MOLECULAR THERAPY-NUCLEIC ACIDS (2022)
Targeting AURKA in Cancer: molecular mechanisms and opportunities for Cancer therapy
Ruijuan Du et al.
MOLECULAR CANCER (2021)
ISRIB Blunts the Integrated Stress Response by Allosterically Antagonising the Inhibitory Effect of Phosphorylated eIF2 on eIF2B
Alisa F. Zyryanova et al.
MOLECULAR CELL (2021)
A peptide encoded within a 5′ untranslated region promotes pain sensitization in mice
Paulino Barragan-Iglesias et al.
PAIN (2021)
ATF4 selectively regulates heat nociception and contributes to kinesin-mediated TRPM3 trafficking
Man-Xiu Xie et al.
NATURE COMMUNICATIONS (2021)
eIF2B conformation and assembly state regulate the integrated stress response
Michael Schoof et al.
ELIFE (2021)
scMC learns biological variation through the alignment of multiple single-cell genomics datasets
Lihua Zhang et al.
GENOME BIOLOGY (2021)
Structure-Mediated RNA Decay by UPF1 and G3BP1
Joseph W. Fischer et al.
MOLECULAR CELL (2020)
Screening Readthrough Compounds to Suppress Nonsense Mutations: Possible Application to β-Thalassemia
Monica Borgatti et al.
JOURNAL OF CLINICAL MEDICINE (2020)
Principles of mRNA control by human PUM proteins elucidated from multimodal experiments and integrative data analysis
Michael B. Wolfe et al.
RNA (2020)
Activation of the integrated stress response in nociceptors drives methylglyoxal-induced pain
Paulino Barragan-Iglesias et al.
PAIN (2019)
Reactivation of nonsense-mediated mRNA decay protects against C9orf72 dipeptide-repeat neurotoxicity
Wangchao Xu et al.
BRAIN (2019)
Structural basis for the inhibition of translation through eIF2α phosphorylation
Yuliya Gordiyenko et al.
NATURE COMMUNICATIONS (2019)
Inhibition of Upf2-Dependent Nonsense-Mediated Decay Leads to Behavioral and Neurophysiological Abnormalities by Activating the Immune Response
Jennifer L. Johnson et al.
NEURON (2019)
hnRNP L-dependent protection of normal mRNAs from NMD subverts quality control in B cell lymphoma
Aparna Kishor et al.
EMBO JOURNAL (2019)
GENCODE reference annotation for the human and mouse genomes
Adam Frankish et al.
NUCLEIC ACIDS RESEARCH (2019)
Expression of a novel versican variant in dorsal root ganglia from spared nerve injury rats
Oliver Bogen et al.
MOLECULAR PAIN (2019)
Database resources of the National Center for Biotechnology Information
Richa Agarwala et al.
NUCLEIC ACIDS RESEARCH (2018)
UPF1 silenced cellular model systems for screening of read-through agents active on β039 thalassemia point mutation
Francesca Salvatori et al.
BMC BIOTECHNOLOGY (2018)
Inhibition of Poly(A)-binding protein with a synthetic RNA mimic reduces pain sensitization in mice
Paulino Barragan-Iglesias et al.
NATURE COMMUNICATIONS (2018)
Abnormal RNA stability in amyotrophic lateral sclerosis
E. M. Tank et al.
NATURE COMMUNICATIONS (2018)
Lrig1 is a haploinsufficient tumor suppressor gene in malignant glioma
Feng Mao et al.
ONCOGENESIS (2018)
QuantSeq 3′ mRNA sequencing for RNA quantification
Pamela Moll et al.
NATURE METHODS (2018)
Axonal G3BP1 stress granule protein limits axonal mRNA translation and nerve regeneration
Pabitra K. Sahoo et al.
NATURE COMMUNICATIONS (2018)
mRNA Stability Assay Using Transcription Inhibition by Actinomycin D in Mouse Pluripotent Stem Cells
Madara Ratnadiwakara et al.
BIO-PROTOCOL (2018)
A GC-rich sequence feature in the 3′ UTR directs UPF1-dependent mRNA decay in mammalian cells
Naoto Imamachi et al.
GENOME RESEARCH (2017)
Thiol-linked alkylation of RNA to assess expression dynamics
Veronika A. Herzog et al.
NATURE METHODS (2017)
Human nonsense-mediated RNA decay regulates EMT by targeting the TGF-ss signaling pathway in lung adenocarcinoma
Lu Cao et al.
CANCER LETTERS (2017)
Upstream ORFs are prevalent translational repressors in vertebrates
Timothy G. Johnstone et al.
EMBO JOURNAL (2016)
The integrated stress response
Karolina Pakos-Zebrucka et al.
EMBO REPORTS (2016)
Nonsense-mediated mRNA decay in humans at a glance
Tatsuaki Kurosaki et al.
JOURNAL OF CELL SCIENCE (2016)
The human RNA surveillance factor UPF1 regulates tumorigenesis by targeting Smad7 in hepatocellular carcinoma
Lei Chang et al.
JOURNAL OF EXPERIMENTAL & CLINICAL CANCER RESEARCH (2016)
Polypyrimidine tract binding protein 1 protects mRNAs from recognition by the nonsense-mediated mRNA decay pathway
Zhiyun Ge et al.
ELIFE (2016)
G3BP1 promotes stress-induced RNA granule interactions to preserve polyadenylated mRNA
Anais Aulas et al.
JOURNAL OF CELL BIOLOGY (2015)
Amelioration of toxicity in neuronal models of amyotrophic lateral sclerosis by hUPF1
Sami J. Barmada et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2015)
Conservation of transcription factor binding specificities across 600 million years of bilateria evolution
Kazuhiro R. Nitta et al.
ELIFE (2015)
Preservation of forelimb function by UPF1 gene therapy in a rat model of TDP-43-induced motor paralysis
K. L. Jackson et al.
GENE THERAPY (2015)
Modeling pain in vitro using nociceptor neurons reprogrammed from fibroblasts
Brian J. Wainger et al.
NATURE NEUROSCIENCE (2015)
Unbiased classification of sensory neuron types by large-scale single-cell RNA sequencing
Dmitry Usoskin et al.
NATURE NEUROSCIENCE (2015)
Subcellular Transcriptomics-Dissection of the mRNA Composition in the Axonal Compartment of Sensory Neurons
Adi Minis et al.
DEVELOPMENTAL NEUROBIOLOGY (2014)
Use of Bru-Seq and BruChase-Seq for genome-wide assessment of the synthesis and stability of RNA
Michelle T. Paulsen et al.
METHODS (2014)
Organizing Principles of Mammalian Nonsense-Mediated mRNA Decay
Maximilian Wei-Lin Popp et al.
ANNUAL REVIEW OF GENETICS, VOL 47 (2013)
The eIF2α kinases: their structures and functions
Neysan Donnelly et al.
CELLULAR AND MOLECULAR LIFE SCIENCES (2013)
Inhibition of Nonsense-Mediated RNA Decay Activates Autophagy
Jordan Wengrod et al.
MOLECULAR AND CELLULAR BIOLOGY (2013)
Gene Expression Regulation by Upstream Open Reading Frames and Human Disease
Cristina Barbosa et al.
PLOS GENETICS (2013)
Identification of pyrimidine derivatives as hSMG-1 inhibitors
Ariamala Gopalsamy et al.
BIOORGANIC & MEDICINAL CHEMISTRY LETTERS (2012)
Generation of a Pain Memory in the Primary Afferent Nociceptor Triggered by PKCε Activation of CPEB
Oliver Bogen et al.
JOURNAL OF NEUROSCIENCE (2012)
Structure of the ternary initiation complex aIF2-GDPNP-methionylated initiator tRNA
Emmanuelle Schmitt et al.
NATURE STRUCTURAL & MOLECULAR BIOLOGY (2012)
Evidence that the Upf1-related molecular motor scans the 3'-UTR to ensure mRNA integrity
Toshiaki Shigeoka et al.
NUCLEIC ACIDS RESEARCH (2012)
ViennaRNA Package 2.0
Ronny Lorenz et al.
ALGORITHMS FOR MOLECULAR BIOLOGY (2011)
Ribosome Profiling of Mouse Embryonic Stem Cells Reveals the Complexity and Dynamics of Mammalian Proteomes
Nicholas T. Ingolia et al.
CELL (2011)
ATF4 and the integrated stress response are induced by ethanol and cytochrome P450 2E1 in human hepatocytes
Laurent Magne et al.
JOURNAL OF HEPATOLOGY (2011)
Inhibition of Nonsense-Mediated RNA Decay by the Tumor Microenvironment Promotes Tumorigenesis
Ding Wang et al.
MOLECULAR AND CELLULAR BIOLOGY (2011)
mRNA-specific regulation of translation by poly(A)-binding proteins
Hannah M. Burgess et al.
BIOCHEMICAL SOCIETY TRANSACTIONS (2010)
Upf1 Senses 3′UTR Length to Potentiate mRNA Decay
J. Robert Hogg et al.
CELL (2010)
Small RNAs Control Sodium Channel Expression, Nociceptor Excitability, and Pain Thresholds
Jing Zhao et al.
JOURNAL OF NEUROSCIENCE (2010)
Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation
Cole Trapnell et al.
NATURE BIOTECHNOLOGY (2010)
TopHat: discovering splice junctions with RNA-Seq
Cole Trapnell et al.
BIOINFORMATICS (2009)
Mapping identifiers for the integration of genomic datasets with the R/Bioconductor package biomaRt
Steffen Durinck et al.
NATURE PROTOCOLS (2009)
Translational Control of Long-Lasting Synaptic Plasticity and Memory
Mauro Costa-Mattioli et al.
NEURON (2009)
Long 3-UTRs target wild-type mRNAs for nonsense-mediated mRNA decay in Saccharomyces cerevisiae
Bessie W. Kebaara et al.
NUCLEIC ACIDS RESEARCH (2009)
Ppp1r15 gene knockout reveals an essential role for translation initiation factor 2 alpha (eIF2α) dephosphorylation in mammalian development
Heather P. Harding et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2009)
Critical role of nociceptor plasticity in chronic pain
David B. Reichling et al.
TRENDS IN NEUROSCIENCES (2009)
Ultrafast and memory-efficient alignment of short DNA sequences to the human genome
Ben Langmead et al.
GENOME BIOLOGY (2009)
Conditional variable importance for random forests
Carolin Strobl et al.
BMC BIOINFORMATICS (2008)
Activating transcription factor 4
Kurosh Ameri et al.
INTERNATIONAL JOURNAL OF BIOCHEMISTRY & CELL BIOLOGY (2008)
Neuronal intermediate filament expression in rat dorsal root ganglia sensory neurons:: an in vivo and in vitro study
M. Fornaro et al.
NEUROSCIENCE (2008)
The NMD mRNA surveillance pathway downregulates aberrant E-cadherin transcripts in gastric cancer cells and in CDH1 mutation carriers
R. Karam et al.
ONCOGENE (2008)
Bias in random forest variable importance measures: Illustrations, sources and a solution
Carolin Strobl et al.
BMC BIOINFORMATICS (2007)
EJC-independent degradation of nonsense immunoglobulin-μ mRNA depends on 3′ UTR length
M Bühler et al.
NATURE STRUCTURAL & MOLECULAR BIOLOGY (2006)
Exon-junction complex components specify distinct routes of nonsense-mediated mRNA decay with differential cofactor requirements
NH Gehring et al.
MOLECULAR CELL (2005)
BioMart and Bioconductor: a powerful link between biological databases and microarray data analysis
S Durinck et al.
BIOINFORMATICS (2005)
Mechanistic links between nonsense-mediated mRNA decay and pre-mRNA splicing in mammalian cells
F Lejeune et al.
CURRENT OPINION IN CELL BIOLOGY (2005)
Nonsense-mediated mRNA decay: molecular insights and mechanistic variations across species
E Conti et al.
CURRENT OPINION IN CELL BIOLOGY (2005)
A faux 3′-UTR promotes aberrant termination and triggers nonsense-mediated mRNA decay
N Amrani et al.
NATURE (2004)
Correction of ATM gene function by aminoglycoside-induced read-through of premature termination codons
CH Lai et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2004)
Cytoplasmic polyadenylation element binding protein-dependent protein synthesis is regulated by calcium/calmodulin-cependent protein kinase II
CM Atkins et al.
JOURNAL OF NEUROSCIENCE (2004)
Translation reinitiation at alternative open reading frames regulates gene expression in an integrated stress response
PD Lu et al.
JOURNAL OF CELL BIOLOGY (2004)
Nonsense-mediated mRNA decay in mammalian cells involves decapping, deadenylating, and exonucleolytic activities
F Lejeune et al.
MOLECULAR CELL (2003)
Analysis of relative gene expression data using real-time quantitative PCR and the 2-ΔΔCT method
KJ Livak et al.
METHODS (2001)
Human SMG-1, a novel phosphatidylinositol 3-kinase-related protein kinase, associates with components of the mRNA surveillance complex and is involved in the regulation of nonsense-mediated mRNA decay
A Yamashita et al.
GENES & DEVELOPMENT (2001)
Share Paper
