Related references
Note: Only part of the references are listed.Convergent consequences of parthenogenesis on stick insect genomes
Kamil S. Jaron et al.
SCIENCE ADVANCES (2022)
X chromosomes show relaxed selection and complete somatic dosage compensation across Timema stick insect species
Darren J. Parker et al.
JOURNAL OF EVOLUTIONARY BIOLOGY (2022)
Phylomitogenomics provides new perspectives on the Euphasmatodea radiation (Insecta: Phasmatodea)
Giobbe Forni et al.
MOLECULAR PHYLOGENETICS AND EVOLUTION (2021)
OrthoDB in 2020: evolutionary and functional annotations of orthologs
Evgeny M. Zdobnov et al.
NUCLEIC ACIDS RESEARCH (2021)
BUSCO Update: Novel and Streamlined Workflows along with Broader and Deeper Phylogenetic Coverage for Scoring of Eukaryotic, Prokaryotic, and Viral Genomes
Mose Manni et al.
MOLECULAR BIOLOGY AND EVOLUTION (2021)
Identifying and removing haplotypic duplication in primary genome assemblies
Dengfeng Guan et al.
BIOINFORMATICS (2020)
IQ-TREE 2: New Models and Efficient Methods for Phylogenetic Inference in the Genomic Era
Bui Quang Minh et al.
MOLECULAR BIOLOGY AND EVOLUTION (2020)
Fast and accurate long-read assembly with wtdbg2
Jue Ruan et al.
NATURE METHODS (2020)
Taming the Turmoil Within: New Insights on the Containment of Transposable Elements
Erin S. Kelleher et al.
TRENDS IN GENETICS (2020)
ape 5.0: an environment for modern phylogenetics and evolutionary analyses in R
Emmanuel Paradis et al.
BIOINFORMATICS (2019)
Old World and New World Phasmatodea: Phylogenomics Resolve the Evolutionary History of Stick and Leaf Insects
Sabrina Simon et al.
FRONTIERS IN ECOLOGY AND EVOLUTION (2019)
Errors in long-read assemblies can critically affect protein prediction
Mick Watson et al.
NATURE BIOTECHNOLOGY (2019)
UFBoot2: Improving the Ultrafast Bootstrap Approximation
Diep Thi Hoang et al.
MOLECULAR BIOLOGY AND EVOLUTION (2018)
Minimap2: pairwise alignment for nucleotide sequences
Heng Li
BIOINFORMATICS (2018)
Nanopore sequencing and assembly of a human genome with ultra-long reads
Miten Jain et al.
NATURE BIOTECHNOLOGY (2018)
The Draft Genome of the Invasive Walking Stick, Medauroidea extradendata, Reveals Extensive Lineage-Specific Gene Family Expansions of Cell Wall Degrading Enzymes in Phasmatodea
Philipp Brand et al.
G3-GENES GENOMES GENETICS (2018)
Mosdepth: quick coverage calculation for genomes and exomes
Brent S. Pedersen et al.
BIOINFORMATICS (2018)
ModelFinder: fast model selection for accurate phylogenetic estimates
Subha Kalyaanamoorthy et al.
NATURE METHODS (2017)
Assembling large genomes: analysis of the stick insect (Clitarchus hookeri) genome reveals a high repeat content and sex-biased genes associated with reproduction
Chen Wu et al.
BMC GENOMICS (2017)
Museum Genomics Confirms that the Lord Howe Island Stick Insect Survived Extinction
Alexander S. Mikheyev et al.
CURRENT BIOLOGY (2017)
Orthograph: a versatile tool for mapping coding nucleotide sequences to clusters of orthologous genes
Malte Petersen et al.
BMC BIOINFORMATICS (2017)
Chromosome-scale shotgun assembly using an in vitro method for long-range linkage
Nicholas H. Putnam et al.
GENOME RESEARCH (2016)
Terrace Aware Data Structure for Phylogenomic Inference from Supermatrices
Olga Chernomor et al.
SYSTEMATIC BIOLOGY (2016)
IQ-TREE: A Fast and Effective Stochastic Algorithm for Estimating Maximum-Likelihood Phylogenies
Lam-Tung Nguyen et al.
MOLECULAR BIOLOGY AND EVOLUTION (2015)
Stick Insect Genomes Reveal Natural Selection's Role in Parallel Speciation
Victor Soria-Carrasco et al.
SCIENCE (2014)
The locust genome provides insight into swarm formation and long-distance flight
Xianhui Wang et al.
NATURE COMMUNICATIONS (2014)
STAR: ultrafast universal RNA-seq aligner
Alexander Dobin et al.
BIOINFORMATICS (2013)
MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability
Kazutaka Katoh et al.
MOLECULAR BIOLOGY AND EVOLUTION (2013)
PartitionFinder: Combined Selection of Partitioning Schemes and Substitution Models for Phylogenetic Analyses
Robert Lanfear et al.
MOLECULAR BIOLOGY AND EVOLUTION (2012)
The phylogenetic placement and biogeographical origins of the New Zealand stick insects (Phasmatodea)
Thomas R. Buckley et al.
SYSTEMATIC ENTOMOLOGY (2010)
trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses
Salvador Capella-Gutierrez et al.
BIOINFORMATICS (2009)
Extreme convergence in stick insect evolution: phylogenetic placement of the Lord Howe Island tree lobster
Thomas R. Buckley et al.
PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2009)
The recovery programme for the Lord Howe Island Phasmid (Dryococelus australis) following its rediscovery
Nicholas Carlile et al.
ECOLOGICAL MANAGEMENT & RESTORATION (2009)
Using native and syntenically mapped cDNA alignments to improve de novo gene finding
Mario Stanke et al.
BIOINFORMATICS (2008)
Notes on the biology, captive management and conservation status of the Lord Howe Island Stick Insect (Dryococelus australis) (Phasmatodea)
Patrick Honan
JOURNAL OF INSECT CONSERVATION (2008)
Demography and weak selection drive patterns of transposable element diversity in natural populations of Arabidopsis lyrata
Steven Lockton et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2008)
Cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences
Weizhong Li et al.
BIOINFORMATICS (2006)
Rediscovery of the 'extinct' Lord Howe Island stick-insect (Dryococelus australis (Montrouzier)) (Phasmatodea) and recommendations for its conservation
D Priddel et al.
BIODIVERSITY AND CONSERVATION (2003)
Transposable elements and the evolution of genome size in eukaryotes
MG Kidwell
GENETICA (2002)
The genome sequence of Drosophila melanogaster
MD Adams et al.
SCIENCE (2000)