4.4 Article

Complete genome of Sphingomonas paucimobilis ZJSH1, an endophytic bacterium from Dendrobium officinale with stress resistance and growth promotion potential

Related references

Note: Only part of the references are listed.
Review Biochemistry & Molecular Biology

Plant-Growth-Promoting Rhizobacteria Emerging as an Effective Bioinoculant to Improve the Growth, Production, and Stress Tolerance of Vegetable Crops

Manoj Kumar et al.

Summary: Vegetable cultivation is economically promising and important for human health. PGPR play a vital role in enhancing vegetable crop production and resilience against various stresses and detrimental effects.

INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES (2021)

Review Microbiology

Plant growth promoting bacteria for combating salinity stress in plants - Recent developments and prospects: A review

Priya Mishra et al.

Summary: Soil salinity poses a major threat to agricultural ecosystems worldwide, with human activities accelerating the process. Salt-tolerant plant growth promoting bacteria (PGPB) show promise in improving plant survival under salinity, offering potential for enhancing agricultural productivity.

MICROBIOLOGICAL RESEARCH (2021)

Review Plant Sciences

Harnessing Bacterial Endophytes for Promotion of Plant Growth and Biotechnological Applications: An Overview

Ahmed M. Eid et al.

Summary: Endophytic bacteria form symbiotic relationships with plants, enhancing plant physiology, growth, and stress tolerance while also producing beneficial metabolites. They have a wide range of applications including bioremediation, disease control, and the production of nanoparticles.

PLANTS-BASEL (2021)

Review Plant Sciences

Bacterial Endophytes: The Hidden Actor in Plant Immune Responses against Biotic Stress

Nadira Oukala et al.

Summary: Bacterial endophytes play a crucial role in promoting plant health through different mechanisms and interacting closely with the plant to induce significant physiological changes. Despite using similar entrance strategies as bacterial pathogens, beneficial bacteria are selectively allowed entrance by the host, and may adapt or avoid host defense mechanisms through genomic modifications. The review provides an overview of endophytic bacteria inhabiting the phytosphere, their diversity, and their interactions with the host, emphasizing the importance of plant-endophyte symbionts in enhancing plant defenses against biotic stress.

PLANTS-BASEL (2021)

Review Biochemistry & Molecular Biology

The Effects of Plant-Associated Bacterial Exopolysaccharides on Plant Abiotic Stress Tolerance

Rafael J. L. Morcillo et al.

Summary: Plant growth-promoting rhizobacteria (PGPR) enhance plant tolerance to abiotic stresses by secreting exopolysaccharides (EPS), including salinity, drought, temperature, and heavy metal toxicity. Studying the mechanisms of EPS action and the impact of abiotic stresses on bacterial EPS production can provide a better understanding of the interactions between plants and microbes.

METABOLITES (2021)

Article Environmental Sciences

Seaweed extract: biostimulator of plant defense and plant productivity

A. Mukherjee et al.

INTERNATIONAL JOURNAL OF ENVIRONMENTAL SCIENCE AND TECHNOLOGY (2020)

Review Biotechnology & Applied Microbiology

Sphingomonas: from diversity and genomics to functional role in environmental remediation and plant growth

Sajjad Asaf et al.

CRITICAL REVIEWS IN BIOTECHNOLOGY (2020)

Review Plant Sciences

How Does Proline Treatment Promote Salt Stress Tolerance During Crop Plant Development?

Ahmed El Moukhtari et al.

FRONTIERS IN PLANT SCIENCE (2020)

Review Microbiology

Roles of two-component regulatory systems in antibiotic resistance

Aimee R. P. Tierney et al.

FUTURE MICROBIOLOGY (2019)

Review Biochemistry & Molecular Biology

Defining the Genetic Basis of Plant-Endophytic Bacteria Interactions

Artur Pinski et al.

INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES (2019)

Article Microbiology

PGAweb: A Web Server for Bacterial Pan-Genome Analysis

Xinyu Chen et al.

FRONTIERS IN MICROBIOLOGY (2018)

Article Biochemistry & Molecular Biology

Canu: scalable and accurate long-read assembly via adaptive k-mer weighting and repeat separation

Sergey Koren et al.

GENOME RESEARCH (2017)

Article Microbiology

Bacterial selection for biological control of plant disease: criterion determination and validation

Monalize Salete Moto et al.

BRAZILIAN JOURNAL OF MICROBIOLOGY (2017)

Review Microbiology

Plant growth-promoting bacterial endophytes

Gustavo Santoyo et al.

MICROBIOLOGICAL RESEARCH (2016)

Review Soil Science

Assessment of gross and net mineralization rates of soil organic phosphorus - A review

Else Katrin Buenemann

SOIL BIOLOGY & BIOCHEMISTRY (2015)

Article Biochemistry & Molecular Biology

Rfam 12.0: updates to the RNA families database

Eric P. Nawrocki et al.

NUCLEIC ACIDS RESEARCH (2015)

Article Biochemistry & Molecular Biology

The SEED and the Rapid Annotation of microbial genomes using Subsystems Technology (RAST)

Ross Overbeek et al.

NUCLEIC ACIDS RESEARCH (2014)

Review Biochemistry & Molecular Biology

Structure and Function of the Bi-Directional Bacterial Flagellar Motor

Yusuke V. Morimoto et al.

BIOMOLECULES (2014)

Article Biochemical Research Methods

Infernal 1.1: 100-fold faster RNA homology searches

Eric P. Nawrocki et al.

BIOINFORMATICS (2013)

Article Biochemistry & Molecular Biology

Structure and Activity of the Flagellar Rotor Protein FliY A MEMBER OF THE CheC PHOSPHATASE FAMILY

Ria Sircar et al.

JOURNAL OF BIOLOGICAL CHEMISTRY (2013)

Review Biotechnology & Applied Microbiology

Plant growth-promoting rhizobacteria (PGPR): emergence in agriculture

P. N. Bhattacharyya et al.

WORLD JOURNAL OF MICROBIOLOGY & BIOTECHNOLOGY (2012)

Article Biochemical Research Methods

Mauve Assembly Metrics

Aaron E. Darling et al.

BIOINFORMATICS (2011)

Review Plant Sciences

Living inside plants: bacterial endophytes

Barbara Reinhold-Hurek et al.

CURRENT OPINION IN PLANT BIOLOGY (2011)

Article Biochemistry & Molecular Biology

genBlastA: Enabling BLAST to identify homologous gene sequences

Rong She et al.

GENOME RESEARCH (2009)

Review Biotechnology & Applied Microbiology

Occurrence, production, and applications of gellan:: current state and perspectives

Arsenio M. Fialho et al.

APPLIED MICROBIOLOGY AND BIOTECHNOLOGY (2008)

Article Biochemical Research Methods

Evaluation of genomic island predictors using a comparative genomics approach

Morgan G. I. Langille et al.

BMC BIOINFORMATICS (2008)

Article Microbiology

PhyR is involved in the general stress response of Methylobacterium extorquens AM1

Benjamin Gourion et al.

JOURNAL OF BACTERIOLOGY (2008)

Article Biochemistry & Molecular Biology

The KEGG resource for deciphering the genome

M Kanehisa et al.

NUCLEIC ACIDS RESEARCH (2004)

Article Biochemistry & Molecular Biology

GeneWise and genomewise

E Birney et al.

GENOME RESEARCH (2004)

Article Biochemistry & Molecular Biology

The SWISS-PROT protein knowledgebase and its supplement TrEMBL in 2003

B Boeckmann et al.

NUCLEIC ACIDS RESEARCH (2003)

Article Biochemistry & Molecular Biology

CheW binding interactions with CheA and Tar -: Importance for chemotaxis signaling in Escherichia coli

MS Boukhvalova et al.

JOURNAL OF BIOLOGICAL CHEMISTRY (2002)

Article Biochemistry & Molecular Biology

The COG database: a tool for genome-scale analysis of protein functions and evolution

RL Tatusov et al.

NUCLEIC ACIDS RESEARCH (2000)