4.7 Article

Development and Complex Application of Methods for the Identification of Mutations in the FAD3A and FAD3B Genes Resulting in the Reduced Content of Linolenic Acid in Flax Oil

Related references

Note: Only part of the references are listed.
Article Biology

Fine-mapping of a putative glutathione S-transferase (GST) gene responsible for yellow seed colour in flax (Linum usitatissimum)

Lester Young et al.

Summary: This study identified a mutated GST gene responsible for yellow seed color in flax through fine mapping analysis.

BMC RESEARCH NOTES (2022)

Article Biochemistry & Molecular Biology

Insights into the Genetic Architecture and Genomic Prediction of Powdery Mildew Resistance in Flax (Linum usitatissimum L.)

Frank M. You et al.

Summary: By sequencing a diverse flax core collection and conducting eight years of field evaluation, this study identified 349 quantitative trait nucleotides (QTNs) related to powdery mildew (PM) resistance in flax. These QTNs showed high stability over years, and the number of favorable alleles per accession was significantly correlated with PM resistance. Genomic selection models using all identified QTNs had a higher predictive ability compared to models using random SNPs, demonstrating the reliability of the QTNs and the additive nature of PM resistance in flax. The QTNs were mainly clustered on the distal ends of the 15 chromosomes, particularly on chromosome 5 and chromosome 13.

INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES (2022)

Article Biochemistry & Molecular Biology

Molecular sexual determinants in Pistacia genus by KASP assay

Zeynep Nur Sahin et al.

Summary: This study successfully developed markers for gender identification of Pistacia seedlings in the early stages without waiting for morphological characteristics to appear, using the KASP assay technology. The markers showed clear allelic discrimination between male and female plants, making them valuable tools for growers.

MOLECULAR BIOLOGY REPORTS (2022)

Article Genetics & Heredity

Genome-Wide Association Study of Salt Tolerance at the Seed Germination Stage in Flax (Linum usitatissimum L.)

Xiao Li et al.

Summary: This study evaluated the salt tolerance of 200 flax accessions during the germination stage and identified quantitative trait loci (QTLs) related to salt tolerance through a Genome-wide Association Study (GWAS). The results showed that oil flax had better salt tolerance than fiber flax. In addition, 268 candidate genes were identified.

GENES (2022)

Article Plant Sciences

Transcriptomic Analysis of Early Flowering Signals in 'Royal' Flax

Megan A. House et al.

Summary: Researchers identified 722 putative flax flowering genes and found that 30% of them showed differential expression. These findings are important for breeding and cultivating flax varieties adapted to the northern climate.

PLANTS-BASEL (2022)

Article Plant Sciences

Clarification of the Position of Linum stelleroides Planch. within the Phylogeny of the Genus Linum L.

Nadezhda L. Bolsheva et al.

Summary: The phylogenetic relationship between Linum stelleroides and other blue-flowered flax species in the Linaceae family has been controversial. Using genetic sequencing data, this study clarified the issue and found that Linum stelleroides forms a basal branch in the blue-flowered flax clade.

PLANTS-BASEL (2022)

Review Biochemistry & Molecular Biology

Plant Genome Sequencing: Modern Technologies and Novel Opportunities for Breeding

A. A. Dmitriev et al.

Summary: The investigation of plant genomes is of great importance for basic research and practical breeding. Advances in sequencing technologies have allowed for the determination of genome sequences for multiple species and have provided breakthroughs in plant genetic studies. Obtaining the pan-genome is crucial for assessing intraspecific polymorphism, identifying key genes, and developing molecular markers.

MOLECULAR BIOLOGY (2022)

Article Agronomy

Cleaved Amplified Polymorphic Sequences (CAPS) Markers for Characterization of the LuFAD3A Gene from Various Flax (Linum usitatissimum L.) Cultivars

Magdalena Walkowiak et al.

Summary: In our research, we used new markers specific to the LuFAD3A gene to differentiate between different varieties of flax. We also proved that the LuFAD3A gene mutation previously detected in low-linolenic flax was absent in the low-linolenic flax studied by us.

AGRONOMY-BASEL (2022)

Article Biochemistry & Molecular Biology

Isolating Linum usitatissimum L. Nuclear DNA Enabled Assembling High-Quality Genome

Ekaterina M. Dvorianinova et al.

Summary: High-quality genome sequences are crucial for understanding biological processes and species evolution. This article presents a scheme for obtaining a continuous assembly of flax using Nanopore data and demonstrates its feasibility through experimentation. The findings provide insights into the choice of genome construction strategy and its relevance for future genomic studies.

INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES (2022)

Review Plant Sciences

Recent advancement in OMICS approaches to enhance abiotic stress tolerance in legumes

Amjad Ali et al.

Summary: The world is facing rapid climate change and a growing global population. Breeding climate-resilient plants, especially legumes, is crucial for food security. Advances in OMICs technology have revolutionized plant breeding and helped develop climate-resilient legume cultivars. Genetic editing techniques have also shown promise in improving legume crops. This review highlights the contribution of OMICs approaches to addressing abiotic stresses in legumes and aims to assist the scientific community in developing climate-resilient legume cultivars.

FRONTIERS IN PLANT SCIENCE (2022)

Article Genetics & Heredity

Genome Sequencing of Fiber Flax Cultivar Atlant Using Oxford Nanopore and Illumina Platforms

Alexey A. Dmitriev et al.

FRONTIERS IN GENETICS (2021)

Article Plant Sciences

Genes Associated with the Flax Plant Type (Oil or Fiber) Identified Based on Genome and Transcriptome Sequencing Data

Liubov V. Povkhova et al.

Summary: Genes associated with different types of flax plants were identified using genome sequencing and transcriptome sequencing data, revealing their importance in shaping key traits of flax plants.

PLANTS-BASEL (2021)

Article Biochemistry & Molecular Biology

Genetic dissection of flowering time in flax (Linum usitatissimum L.) through single- and multi-locus genome-wide association studies

Braulio J. Soto-Cerda et al.

Summary: In a genome-wide association study on 200 flax accessions, 40 quantitative trait nucleotides associated with 27 quantitative trait loci for flowering time were identified, with significant correlation between positive-effect alleles in accessions and flowering time. The stable QTL identified in at least three environments harbored orthologous genes related to flowering time in Arabidopsis thaliana and Oryza sativa. In silico gene expression analysis suggested these genes may play roles in the transition from vegetative to reproductive phase, flower development, and fertilization.

MOLECULAR GENETICS AND GENOMICS (2021)

Article Genetics & Heredity

Nanopore and Illumina Genome Sequencing of Fusarium oxysporum f. sp. lini Strains of Different Virulence

Ekaterina M. Dvorianinova et al.

FRONTIERS IN GENETICS (2021)

Review Biotechnology & Applied Microbiology

Recent advancements in molecular marker-assisted selection and applications in plant breeding programmes

Nazarul Hasan et al.

Summary: The use of DNA markers in plant breeding through marker-assisted selection has significantly sped up the development and market release of new crop varieties. It has also contributed to advancements in genetic diversity and breeding tools for crop plants.

JOURNAL OF GENETIC ENGINEERING AND BIOTECHNOLOGY (2021)

Article Biochemistry & Molecular Biology

A High Resolution Melting Analysis-Based Genotyping Toolkit for the Peach (Prunus persica) Chilling Requirement

Lin Chou et al.

INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES (2020)

Article Biochemistry & Molecular Biology

Genomic Prediction Accuracy of Seven Breeding Selection Traits Improved by QTL Identification in Flax

Samuel Lan et al.

INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES (2020)

Review Biotechnology & Applied Microbiology

The Wheat 660K SNP array demonstrates great potential for marker-assisted selection in polyploid wheat

Congwei Sun et al.

PLANT BIOTECHNOLOGY JOURNAL (2020)

Article Biochemistry & Molecular Biology

Cleaved amplified polymorphic sequences (CAPS) marker for identification of two mutant alleles of the rapeseedBnaA.FAD2gene

Marcin Matuszczak et al.

MOLECULAR BIOLOGY REPORTS (2020)

Article Genetics & Heredity

Transcriptomes of Different Tissues of Flax (Linum usitatissimum L.) Cultivars With Diverse Characteristics

Alexey A. Dmitriev et al.

FRONTIERS IN GENETICS (2020)

Article Evolutionary Biology

Characterization of repeated DNA sequences in genomes of blue-flowered flax

Nadezhda L. Bolsheva et al.

BMC EVOLUTIONARY BIOLOGY (2019)

Article Plant Sciences

Flax (Linum usitatissimum L.) response to non-optimal soil acidity and zinc deficiency

Alexey A. Dmitriev et al.

BMC PLANT BIOLOGY (2019)

Article Biochemistry & Molecular Biology

Sex-specific polymorphism of MET1 and ARR17 genes in Populus x sibirica

Nataliya Melnikova et al.

BIOCHIMIE (2019)

Review Pharmacology & Pharmacy

Anticancer and antimetastatic potential of enterolactone: Clinical, preclinical and mechanistic perspectives

Aniket Mali et al.

EUROPEAN JOURNAL OF PHARMACOLOGY (2019)

Article Multidisciplinary Sciences

Comparison of TaqMan, KASP and rhAmp SNP genotyping platforms in hexaploid wheat

Habtamu Ayalew et al.

PLOS ONE (2019)

Review Biochemistry & Molecular Biology

Linseed Essential Oil - Source of Lipids as Active Ingredients for Pharmaceuticals and Nutraceuticals

Joana R. Campos et al.

CURRENT MEDICINAL CHEMISTRY (2019)

Review Cardiac & Cardiovascular Systems

Flaxseed: its bioactive components and their cardiovascular benefits

Mihir Parikh et al.

AMERICAN JOURNAL OF PHYSIOLOGY-HEART AND CIRCULATORY PHYSIOLOGY (2018)

Article Biochemical Research Methods

Comparison of three PCR-based assays for SNP genotyping in plants

Chiara Broccanello et al.

PLANT METHODS (2018)

Article Biochemistry & Molecular Biology

CAX3 Gene is Involved in Flax Response to High Soil Acidity and Aluminum Exposure

A. V. Zyablitsin et al.

MOLECULAR BIOLOGY (2018)

Article Agriculture, Multidisciplinary

Genetics polymorphism of poplars from Moscow region based on high-throughput sequencing of ITS

E. Borkhert et al.

VAVILOVSKII ZHURNAL GENETIKI I SELEKTSII (2018)

Review Biochemistry & Molecular Biology

Crop Breeding Chips and Genotyping Platforms: Progress, Challenges, and Perspectives

Awais Rasheed et al.

MOLECULAR PLANT (2017)

Article Chemistry, Multidisciplinary

Transcriptome Landscape at Different Developmental Stages of a Drought Tolerant Cultivar of Flax (Linum usitatissimum)

Prasanta K. Dash et al.

FRONTIERS IN CHEMISTRY (2017)

Article Multidisciplinary Sciences

High-throughput sequencing of multiple amplicons for barcoding and integrative taxonomy

Perrine Cruaud et al.

SCIENTIFIC REPORTS (2017)

Article Evolutionary Biology

Evolution of blue-flowered species of genus Linum based on high-throughput sequencing of ribosomal RNA genes

Nadezhda L. Bolsheva et al.

BMC EVOLUTIONARY BIOLOGY (2017)

Article Plant Sciences

Gene expression profiling of flax (Linum usitatissimum L.) under edaphic stress

Alexey A. Dmitriev et al.

BMC PLANT BIOLOGY (2016)

Article Agriculture, Multidisciplinary

Sequence characterization and in silico structure prediction of fatty acid desaturases in linseed varieties with differential fatty acid composition

Ashwini V. Rajwade et al.

JOURNAL OF THE SCIENCE OF FOOD AND AGRICULTURE (2016)

Article Biochemistry & Molecular Biology

Multiplexed shotgun sequencing reveals congruent three-genome phylogenetic signals for four botanical sections of the flax genus Linum

Yong-Bi Fu et al.

MOLECULAR PHYLOGENETICS AND EVOLUTION (2016)

Review Plant Sciences

High-Resolution DNA Melting Analysis in Plant Research

Ivan Simko

TRENDS IN PLANT SCIENCE (2016)

Article Plant Sciences

Glutathione S-transferases and UDP-glycosyltransferases Are Involved in Response to Aluminum Stress in Flax

Alexey A. Dmitriev et al.

FRONTIERS IN PLANT SCIENCE (2016)

Article Biochemistry & Molecular Biology

Excess fertilizer responsive miRNAs revealed in Linum usitatissimum L

Nataliya V. Melnikova et al.

BIOCHIMIE (2015)

Review Nutrition & Dietetics

Potential protective properties of flax lignan secoisolariciresinol diglucoside

Muhammad Imran et al.

NUTRITION JOURNAL (2015)

Article Biochemical Research Methods

Ion Torrent sequencing as a tool for mutation discovery in the flax (Linum usitatissimum L.) genome

Leonardo Galindo-Gonzalez et al.

PLANT METHODS (2015)

Review Plant Sciences

Next Generation Sequencing Technologies: The Doorway to the Unexplored Genomics of Non-Model Plants

Chibuikem I. N. Unamba et al.

FRONTIERS IN PLANT SCIENCE (2015)

Article Biochemical Research Methods

Trimmomatic: a flexible trimmer for Illumina sequence data

Anthony M. Bolger et al.

BIOINFORMATICS (2014)

Review Biotechnology & Applied Microbiology

Genomics and molecular breeding in lesser explored pulse crops: Current trends and future opportunities

Abhishek Bohra et al.

BIOTECHNOLOGY ADVANCES (2014)

Review Food Science & Technology

Flax and flaxseed oil: an ancient medicine & modern functional food

Ankit Goyal et al.

JOURNAL OF FOOD SCIENCE AND TECHNOLOGY-MYSORE (2014)

News Item Biochemistry & Molecular Biology

Next-generation phylogenetics takes root

John E. Mccormack et al.

MOLECULAR ECOLOGY (2013)

Review Biochemistry & Molecular Biology

Applications of next-generation sequencing to phylogeography and phylogenetics

John E. McCormack et al.

MOLECULAR PHYLOGENETICS AND EVOLUTION (2013)

Article Agronomy

Genetic variation of six desaturase genes in flax and their impact on fatty acid composition

Dinushika Thambugala et al.

THEORETICAL AND APPLIED GENETICS (2013)

Article Biotechnology & Applied Microbiology

Genome wide SNP discovery in flax through next generation sequencing of reduced representation libraries

Santosh Kumar et al.

BMC GENOMICS (2012)

Article Biotechnology & Applied Microbiology

NGS technologies for analyzing germplasm diversity in genebanks*

Benjamin Kilian et al.

BRIEFINGS IN FUNCTIONAL GENOMICS (2012)

Article Biochemistry & Molecular Biology

Developing genomic resources in two Linum species via 454 pyrosequencing and genomic reduction

Yong-Bi Fu et al.

MOLECULAR ECOLOGY RESOURCES (2012)

Review Food Science & Technology

Flaxseed: A Potential Source of Food, Feed and Fiber

K. K. Singh et al.

CRITICAL REVIEWS IN FOOD SCIENCE AND NUTRITION (2011)

Review Pathology

High-resolution DNA melting analysis in clinical research and diagnostics

Jesse L. Montgomery et al.

EXPERT REVIEW OF MOLECULAR DIAGNOSTICS (2010)

Review Pharmacology & Pharmacy

High-resolution DNA melting analysis for simple and efficient molecular diagnostics

Gudrun H. Reed et al.

PHARMACOGENOMICS (2007)

Article Plant Sciences

Two FAD3 desaturase genes control the level of linolenic acid in flax seed

P Vrinten et al.

PLANT PHYSIOLOGY (2005)