☆ 4.7 Review

In vitro and ex vivo modeling of enteric bacterial infections

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Muhammad Shoaib et al.

RSC ADVANCES (2019)

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Review Microbiology

Listeria monocytogenes: towards a complete picture of its physiology and pathogenesis

Lilliana Radoshevich et al.

NATURE REVIEWS MICROBIOLOGY (2018)

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Article Biochemistry & Molecular Biology

Cytidine Diphosphoramidate Kinase: An Enzyme Required for the Biosynthesis of the ⁢O⁢-Methyl Phosphoramidate Modification in the Capsular Polysaccharides of ⁢Campylobacter jejuni⁢

Zane W. Taylor et al.

BIOCHEMISTRY (2018)

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Article Multidisciplinary Sciences

Patients with familial adenomatous polyposis harbor colonic biofilms containing tumorigenic bacteria

Christine M. Dejea et al.

SCIENCE (2018)

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Review Immunology

The Intestinal Epithelium: Central Coordinator of Mucosal Immunity

Joannie M. Allaire et al.

TRENDS IN IMMUNOLOGY (2018)

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Article Microbiology

Novel Segment- and Host-Specific Patterns of Enteroaggregative Escherichia coli Adherence to Human Intestinal Enteroids

Anubama Rajan et al.

MBIO (2018)

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Article Multidisciplinary Sciences

Vibrio cholerae accessory colonisation factor AcfC: a chemotactic protein with a role in hyperinfectivity

Esmeralda Valiente et al.

SCIENTIFIC REPORTS (2018)

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Article Microbiology

Modelling Cryptosporidium infection in human small intestinal and lung organoids

Inha Heo et al.

NATURE MICROBIOLOGY (2018)

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Article Medicine, General & Internal

Salmonella Typhi Colonization Provokes Extensive Transcriptional Changes Aimed at Evading Host Mucosal Immune Defense During Early Infection of Human Intestinal Tissue

K. P. Nickerson et al.

EBIOMEDICINE (2018)

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Article Immunology

A Map of Toll-like Receptor Expression in the Intestinal Epithelium Reveals Distinct Spatial, Cell Type-Specific, and Temporal Patterns

April E. Price et al.

IMMUNITY (2018)

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Article Infectious Diseases

Estimates of the global, regional, and national morbidity, mortality, and aetiologies of diarrhoea in 195 countries: a systematic analysis for the Global Burden of Disease Study 2016

Christopher Troeger et al.

LANCET INFECTIOUS DISEASES (2018)

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Article Multidisciplinary Sciences

Alpha-kinase 1 is a cytosolic innate immune receptor for bacterial ADP-heptose

Ping Zhou et al.

NATURE (2018)

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Article Multidisciplinary Sciences

Interleukin-22 promotes phagolysosomal fusion to induce protection against Salmonella enterica Typhimurium in human epithelial cells

Jessica L. Forbester et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2018)

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Article Multidisciplinary Sciences

Development of a primary human Small Intestine-on-a-Chip using biopsy-derived organoids

Magdalena Kasendra et al.

SCIENTIFIC REPORTS (2018)

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Article Nanoscience & Nanotechnology

Intestinal Villi Model with Blood Capillaries Fabricated Using Collagen-Based Bioink and Dual-Cell-Printing Process

WonJin Kim et al.

ACS APPLIED MATERIALS & INTERFACES (2018)

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Article Multidisciplinary Sciences

Salmonella persisters undermine host immune defenses during antibiotic treatment

Daphne A. C. Stapels et al.

SCIENCE (2018)

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Article Gastroenterology & Hepatology

A High-Throughput Organoid Microinjection Platform to Study Gastrointestinal Microbiota and Luminal Physiology

Ian A. Williamson et al.

CELLULAR AND MOLECULAR GASTROENTEROLOGY AND HEPATOLOGY (2018)

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Article Immunology

CX(3)CR1(+) Cell-Mediated Salmonella Exclusion Protects the Intestinal Mucosa during the Initial Stage of Infection

Angela L. Man et al.

JOURNAL OF IMMUNOLOGY (2017)

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Article Microbiology

Single-cell RNA-seq ties macrophage polarization to growth rate of intracellular Salmonella

Antoine-Emmanuel Saliba et al.

NATURE MICROBIOLOGY (2017)

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Review Immunology

Gut microbiota: Role in pathogen colonization, immune responses, and inflammatory disease

Joseph M. Pickard et al.

IMMUNOLOGICAL REVIEWS (2017)

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Review Pediatrics

Non-typhoidal Salmonella infections in children: Review of literature and recommendations for management

Sophie C. H. Wen et al.

JOURNAL OF PAEDIATRICS AND CHILD HEALTH (2017)

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Article Multidisciplinary Sciences

A single-cell survey of the small intestinal epithelium

Adam L. Haber et al.

NATURE (2017)

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Article Multidisciplinary Sciences

Ubiquitination and degradation of GBPs by a Shigella effector to suppress host defence

Peng Li et al.

NATURE (2017)

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Review Biochemistry & Molecular Biology

Rules of Engagement: The Type VI Secretion System in Vibrio cholerae

Avatar Joshi et al.

TRENDS IN MICROBIOLOGY (2017)

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Article Microbiology

Respiration of Microbiota-Derived 1,2-propanediol Drives Salmonella Expansion during Colitis

Franziska Faber et al.

PLOS PATHOGENS (2017)

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Bacterial colonization stimulates a complex physiological response in the immature human intestinal epithelium

David R. Hill et al.

ELIFE (2017)

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Review Immunology

How Do the Virulence Factors of Shigella Work Together to Cause Disease ?

Emily Mattock et al.

FRONTIERS IN CELLULAR AND INFECTION MICROBIOLOGY (2017)

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Article Cell & Tissue Engineering

Development and Characterization of a Human and Mouse Intestinal Epithelial Cell Monolayer Platform

Kenji Kozuka et al.

STEM CELL REPORTS (2017)

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Article Biochemistry & Molecular Biology

Intestinal Epithelial and Intraepithelial T Cell Crosstalk Mediates a Dynamic Response to Infection

David P. Hoytema van Konijnenburg et al.

CELL (2017)

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A microengineered collagen scaffold for generating a polarized crypt-villus architecture of human small intestinal epithelium

Yuli Wang et al.

BIOMATERIALS (2017)

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Article Cell Biology

Host cell binding of the flagellar tip protein of Campylobacterjejuni

Claudia M. Freitag et al.

CELLULAR MICROBIOLOGY (2017)

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Article Virology

Human Intestinal Enteroids: a New Model To Study Human Rotavirus Infection, Host Restriction, and Pathophysiology

Kapil Saxena et al.

JOURNAL OF VIROLOGY (2016)

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Article Multidisciplinary Sciences

Contributions of microbiome and mechanical deformation to intestinal bacterial overgrowth and inflammation in a human gut-on-a-chip

Hyun Jung Kim et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2016)

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Article Gastroenterology & Hepatology

An organotypic slice model for ex vivo study of neural, immune, and microbial interactions of mouse intestine

Luke A. Schwerdtfeger et al.

AMERICAN JOURNAL OF PHYSIOLOGY-GASTROINTESTINAL AND LIVER PHYSIOLOGY (2016)

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Article Microbiology

Clostridium difficile-mediated effects on human intestinal epithelia: Modelling host-pathogen interactions in a vertical diffusion chamber

Nazila V. Jafari et al.

ANAEROBE (2016)

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Article Biochemistry & Molecular Biology

Variation in Microbiome LPS Immunogenicity Contributes to Autoimmunity in Humans

Tommi Vatanen et al.

CELL (2016)

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Review Developmental Biology

Modeling infectious diseases and host-microbe interactions in gastrointestinal organoids

Sina Bartfeld

DEVELOPMENTAL BIOLOGY (2016)

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Review Biochemistry & Molecular Biology

Precision-cut intestinal slices: alternative model for drug transport, metabolism, and toxicology research

Ming Li et al.

EXPERT OPINION ON DRUG METABOLISM & TOXICOLOGY (2016)

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Adherence to Intestinal Cells Promotes Biofilm Formation in Vibrio cholerae

Chirantana Sengupta et al.

JOURNAL OF INFECTIOUS DISEASES (2016)

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Article Multidisciplinary Sciences

Dual RNA-seq unveils noncoding RNA functions in host-pathogen interactions

Alexander J. Westermann et al.

NATURE (2016)

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Article Multidisciplinary Sciences

Replication of human noroviruses in stem cell-derived human enteroids

Khalil Ettayebi et al.

SCIENCE (2016)

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A Simple, Reproducible, Inexpensive, Yet Old-Fashioned Method for Determining Phagocytic and Bactericidal Activities of Macrophages

Masakazu Kaneko et al.

YONSEI MEDICAL JOURNAL (2016)

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Article Immunology

Molecular and Cellular Mechanisms of Shigella flexneri Dissemination

Herve Agaisse

FRONTIERS IN CELLULAR AND INFECTION MICROBIOLOGY (2016)

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Development of Functional Microfold (M) Cells from Intestinal Stem Cells in Primary Human Enteroids

Joshua D. Rouch et al.

PLOS ONE (2016)

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Article Gastroenterology & Hepatology

Human Clostridium difficile infection: altered mucus production and composition

Melinda A. Engevik et al.

AMERICAN JOURNAL OF PHYSIOLOGY-GASTROINTESTINAL AND LIVER PHYSIOLOGY (2015)

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Article Biochemical Research Methods

Intravital two-photon imaging of the gastrointestinal tract

Masha Kolesnikov et al.

JOURNAL OF IMMUNOLOGICAL METHODS (2015)

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Review Immunology

No Vacancy: How Beneficial Microbes Cooperate with Immunity To Provide Colonization Resistance to Pathogens

Martina Sassone-Corsi et al.

JOURNAL OF IMMUNOLOGY (2015)

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Article Multidisciplinary Sciences

Glycan:glycan interactions: High affinity biomolecular interactions that can mediate binding of pathogenic bacteria to host cells

Christopher J. Day et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2015)

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Article Multidisciplinary Sciences

Salmonella promotes virulence by repressing cellulose production

Mauricio H. Pontes et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2015)

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Article Microbiology

Identification of Mammalian Proteins That Collaborate with Type III Secretion System Function: Involvement of a Chemokine Receptor in Supporting Translocon Activity

Kerri-Lynn Sheahan et al.

MBIO (2015)

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Article Microbiology

Escape of Actively Secreting Shigella flexneri from ATG8/LC3-Positive Vacuoles Formed during Cell-To-Cell Spread Is Facilitated by IcsB and VirA

Francois-Xavier Campbell-Valois et al.

MBIO (2015)

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Article Cell Biology

The Evolution of Campylobacter jejuni and Campylobacter coli

Samuel K. Sheppard et al.

COLD SPRING HARBOR PERSPECTIVES IN BIOLOGY (2015)

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Article Infectious Diseases

Bile Salts Modulate the Mucin-Activated Type VI Secretion System of Pandemic Vibrio cholerae

Verena Bachmann et al.

PLOS NEGLECTED TROPICAL DISEASES (2015)

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THE NATURAL HISTORY OF MODEL ORGANISMS The unexhausted potential of E. coli

Zachary D. Blount

ELIFE (2015)

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Salmonella: A review on pathogenesis, epidemiology and antibiotic resistance

Shu-Kee Eng et al.

FRONTIERS IN LIFE SCIENCE (2015)

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Development of an enhanced human gastrointestinal epithelial culture system to facilitate patient-based assays

Kelli L. VanDussen et al.

GUT (2015)

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Adhesion as a weapon in microbial competition

Jonas Schluter et al.

ISME JOURNAL (2015)

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Review Biochemistry & Molecular Biology

Bacterial Genotoxins: Merging the DNA Damage Response into Infection Biology

Francesca Grasso et al.

BIOMOLECULES (2015)

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The unexhausted potential of E. coli

Zachary D. Blount

ELIFE (2015)

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Gastrointestinal Microbiota-Mediated Control of Enteric Pathogens

Sophie Yurist-Doutsch et al.

ANNUAL REVIEW OF GENETICS, VOL 48 (2014)

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Article Biotechnology & Applied Microbiology

Synthetic Small Intestinal Scaffolds for Improved Studies of Intestinal Differentiation

Cait M. Costello et al.

BIOTECHNOLOGY AND BIOENGINEERING (2014)

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Article Microbiology

Noncanonical Inflammasome Activation of Caspase-4/Caspase-11 Mediates Epithelial Defenses against Enteric Bacterial Pathogens

Leigh A. Knodler et al.

CELL HOST & MICROBE (2014)

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Article Cell Biology

Three-dimensional intestinal villi epithelium enhances protection of human intestinal cells from bacterial infection by inducing mucin expression

Si Hyun Kim et al.

INTEGRATIVE BIOLOGY (2014)

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Article Medicine, Research & Experimental

3-D Intestinal Scaffolds for Evaluating the Therapeutic Potential of Probiotics

Cait M. Costello et al.

MOLECULAR PHARMACEUTICS (2014)

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Shigella IpaH7.8 E3 ubiquitin ligase targets glomulin and activates inflammasomes to demolish macrophages

Shiho Suzuki et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2014)

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Article Biotechnology & Applied Microbiology

Growth Media Simulating Ileal and Colonic Environments Affect the Intracellular Proteome and Carbon Fluxes of Enterohemorrhagic Escherichia coli O157:H7 Strain EDL933

Sabrina Polzin et al.

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2013)

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Article Microbiology

Cholera Toxin Disrupts Barrier Function by Inhibiting Exocyst-Mediated Trafficking of Host Proteins to Intestinal Cell Junctions

Annabel Guichard et al.

CELL HOST & MICROBE (2013)

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Article Microbiology

The Shigella OspC3 Effector Inhibits Caspase-4, Antagonizes Inflammatory Cell Death, and Promotes Epithelial Infection

Taira Kobayashi et al.

CELL HOST & MICROBE (2013)

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Article Pharmacology & Pharmacy

Establishment of a triple co-culture in vitro cell models to study intestinal absorption of peptide drugs

Filipa Antunes et al.

EUROPEAN JOURNAL OF PHARMACEUTICS AND BIOPHARMACEUTICS (2013)

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Article Immunology

Luminal Bacteria Recruit CD103+ Dendritic Cells into the Intestinal Epithelium to Sample Bacterial Antigens for Presentation

Julia Farache et al.

IMMUNITY (2013)

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Article Cell Biology

Gut-on-a-Chip microenvironment induces human intestinal cells to undergo villus differentiation

Hyun Jung Kim et al.

INTEGRATIVE BIOLOGY (2013)

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Article Microbiology

Host Cell Contact Induces Expression of Virulence Factors and VieA, a Cyclic di-GMP Phosphodiesterase, in Vibrio cholerae

Amit K. Dey et al.

JOURNAL OF BACTERIOLOGY (2013)

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Article Multidisciplinary Sciences

Structure and function of the Salmonella Typhi chimaeric A2B5 typhoid toxin

Jeongmin Song et al.

NATURE (2013)

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Review Immunology

Control of pathogens and pathobionts by the gut microbiota

Nobuhiko Kamada et al.

NATURE IMMUNOLOGY (2013)

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Cyclic di-GMP: the First 25 Years of a Universal Bacterial Second Messenger

Ute Romling et al.

MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS (2013)

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Automated Filtering of Intrinsic Movement Artifacts during Two-Photon Intravital Microscopy

Denis Soulet et al.

PLOS ONE (2013)

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Salmonella Uses Energy Taxis to Benefit from Intestinal Inflammation

Fabian Rivera-Chavez et al.

PLOS PATHOGENS (2013)

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Article Biochemical Research Methods

Human gut-on-a-chip inhabited by microbial flora that experiences intestinal peristalsis-like motions and flow

Hyun Jung Kim et al.

LAB ON A CHIP (2012)

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Article Multidisciplinary Sciences

Chromosomal and Plasmid-Encoded Factors of Shigella flexneri Induce Secretogenic Activity Ex Vivo

Christina Faherty et al.

PLOS ONE (2012)

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Article Gastroenterology & Hepatology

Rapid paracellular transmigration of Campylobacter jejuni across polarized epithelial cells without affecting TER: role of proteolytic-active HtrA cleaving E-cadherin but not fibronectin

Manja Boehm et al.

GUT PATHOGENS (2012)

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Host-Pathogen Interaction in Invasive Salmonellosis

Hanna K. de Jong et al.

PLOS PATHOGENS (2012)

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Article Gastroenterology & Hepatology

Enteric glia protect against Shigella flexneri invasion in intestinal epithelial cells: a role for S-nitrosoglutathione

Mathurin Flamant et al.

GUT (2011)

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Regulation of Tight Junction Permeability by Intestinal Bacteria and Dietary Components

Dulantha Ulluwishewa et al.

JOURNAL OF NUTRITION (2011)

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Complex c-di-GMP Signaling Networks Mediate Transition between Virulence Properties and Biofilm Formation in Salmonella enterica Serovar Typhimurium

Irfan Ahmad et al.

PLOS ONE (2011)

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Article Microbiology

Cyclic di-GMP signalling controls virulence properties of Salmonella enterica serovar Typhimurium at the mucosal lining

Agaristi Lamprokostopoulou et al.

ENVIRONMENTAL MICROBIOLOGY (2010)

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Review Biochemistry & Molecular Biology

Tight junctions as targets of infectious agents

Julian A. Guttman et al.

BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES (2009)

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Genetics of susceptibility to infection with enteric pathogens

Jose Flores et al.

CURRENT OPINION IN INFECTIOUS DISEASES (2009)

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Article Biochemistry & Molecular Biology

Epidemic multiple drug resistant Salmonella Typhimurium causing invasive disease in sub-Saharan Africa have a distinct genotype

Robert A. Kingsley et al.

GENOME RESEARCH (2009)

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Review Biochemistry & Molecular Biology

Cholera toxin structure, gene regulation and pathophysiological and immunological aspects

J. Sanchez et al.

CELLULAR AND MOLECULAR LIFE SCIENCES (2008)

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Article Immunology

Intestinal Adherence of Vibrio cholerae Involves a Coordinated Interaction between Colonization Factor GbpA and Mucin

Rudra Bhowmick et al.

INFECTION AND IMMUNITY (2008)

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Article Immunology

Campylobacter-induced interleukin-8 secretion in polarized human intestinal epithelial cells requires Campylobacter-secreted cytolethal distending toxin- and toll-like receptor-mediated activation of NF-κB

Jie Zheng et al.

INFECTION AND IMMUNITY (2008)

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Article Immunology

Comparison of carbon nutrition for pathogenic and commensal Escherichia coli strains in the mouse intestine

Andrew J. Fabich et al.

INFECTION AND IMMUNITY (2008)

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Review Infectious Diseases

Salmonella infections in immunocompromised adults

Melita A. Gordon

JOURNAL OF INFECTION (2008)

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Article Biochemical Research Methods

An integrated microfluidic system for long-term perfusion culture and on-line monitoring of intestinal tissue models

Hiroshi Kimura et al.

LAB ON A CHIP (2008)

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Article Gastroenterology & Hepatology

Disruption of colonic barrier function and induction of mediator release by strains of Campylobacter jejuni that invade epithelial cells

Johannes Beltinger et al.

WORLD JOURNAL OF GASTROENTEROLOGY (2008)

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Article Immunology

Bacterial c-di-GMP is an immunostimulatory molecule

David K. R. Karaolis et al.

JOURNAL OF IMMUNOLOGY (2007)

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Article Multidisciplinary Sciences

Identification of a conserved bacterial protein secretion system in Vibrio cholerae using the Dictyostelium host model system

S Pukatzki et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2006)

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Article Multidisciplinary Sciences

Real-time imaging of type III secretion:: Salmonella SipA injection into host cells

MC Schlumberger et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2005)

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Review Cell Biology

The Caco-2 cell line as a model of the intestinal barrier: influence of cell and culture-related factors on Caco-2 cell functional characteristics

Y Sambuy et al.

CELL BIOLOGY AND TOXICOLOGY (2005)

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Article Immunology

Salmonella typhimurium persists within macrophages in the mesenteric lymph nodes of chronically infected Nramp1+/+ mice and can be reactivated by IFN γ neutralization

DM Monack et al.

JOURNAL OF EXPERIMENTAL MEDICINE (2004)

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Article Multidisciplinary Sciences

Vi polysaccharide of Salmonella typhi targets the prohibitin family of molecules in intestinal epithelial cells and suppresses early inflammatory responses

A Sharma et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2004)

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Article Chemistry, Medicinal

HT29-MTX and Caco-2/TC7 monolayers as predictive models for human intestinal absorption: Role of the mucus layer

C Pontier et al.

JOURNAL OF PHARMACEUTICAL SCIENCES (2001)

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Article Medicine, Research & Experimental

Salmonella typhimurium translocates flagellin across intestinal epithelia, inducing a proinflammatory response

AT Gewirtz et al.

JOURNAL OF CLINICAL INVESTIGATION (2001)

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Article Biochemistry & Molecular Biology

Expression of specific markers and particle transport in a new human intestinal M-cell model

E Gullberg et al.

BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS (2000)

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Article Surgery

Aggregation substance promotes colonic mucosal invasion of Enterococcus faecalis in an ex vivo model

R Isenmann et al.

JOURNAL OF SURGICAL RESEARCH (2000)

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