4.7 Review

The F-bZIP-regulated Zn deficiency response in land plants

Related references

Note: Only part of the references are listed.
Review Plant Sciences

The cell biology of zinc

Stephan Clemens

Summary: Nearly 10% of plant proteins belong to the zinc proteome and require zinc as a catalyst or structural element, with the majority of protein-bound zinc in eukaryotic cells found in the cytosol. Various metabolites and peptides serve as zinc buffers to supply zinc to enzymes, transporters, or sensor proteins, with zinc acquisition mediated by specific proteins and zinc transportation controlled by different mechanisms. Recent studies in mammalian cells have revealed the regulatory roles of zinc in modulating cellular zinc pools and influencing protein interactions and signaling cascade activities.

JOURNAL OF EXPERIMENTAL BOTANY (2022)

Review Plant Sciences

Zinc deficiency responses: bridging the gap between Arabidopsis and dicotyledonous crops

Noemie Thiebaut et al.

Summary: Zinc deficiency in agricultural soils is widespread and has significant impacts on crop yield, quality, human nutrition, and health. This article focuses on the investigation of zinc deficiency response mechanisms in dicotyledonous crops, such as Phaseolus vulgaris, Glycine max, Brassica oleracea, and Solanum lycopersicum, and highlights the importance of translating knowledge from Arabidopsis to improve zinc biofortification strategies in dicotyledonous crops. The article also discusses the function and regulation of zinc transporters and chelators, zinc-sensing mechanisms, and the role of hormones in the zinc deficiency response.

JOURNAL OF EXPERIMENTAL BOTANY (2022)

Review Plant Sciences

Micronutrient homeostasis in plants for more sustainable agriculture and healthier human nutrition

Ana G. L. Assuncao et al.

Summary: This review highlights the importance of plant micronutrient homeostasis for healthy nutrition and sustainable agriculture. Providing sustainable and nutritious food for the growing population is a major challenge. Micronutrient deficiencies adversely affect crop production, nutritional value, and human health. The review calls for awareness on the relevance of micronutrients in crop production and quality, emphasizing the need for better micronutrient nutrition in human populations.

JOURNAL OF EXPERIMENTAL BOTANY (2022)

Review Plant Sciences

How Plants Recalibrate Cellular Iron Homeostasis

Isabel Cristina Velez-Bermudez et al.

Summary: Insufficient iron supply affects plant growth and agricultural ecosystems, as well as poses a threat to human health. Research has revealed the complexity of how plants regulate cellular iron homeostasis, involving various environmental cues.

PLANT AND CELL PHYSIOLOGY (2022)

Article Plant Sciences

Regulation of the Zinc Deficiency Response in the Legume Model Medicago truncatula

Feixue Liao et al.

Summary: This study investigates the regulatory mechanism and evolutionary conservation of zinc deficiency response in legume plants, focusing on the F-bZIP transcription factors. The results provide insights into the functional roles of F-bZIPs and related genes in legume crops, contributing to the development of strategies for improving zinc content.

FRONTIERS IN PLANT SCIENCE (2022)

Review Biochemistry & Molecular Biology

Tools and techniques for illuminating the cell biology of zinc

Evan P. S. Pratt et al.

Summary: Zinc (Zn2+) is an essential micronutrient that plays key roles in cellular processes. Recent developments in fluorescent sensors, chelators, and proteomics methods have been instrumental in understanding the diverse functions of zinc in cells, particularly in regulating cell function and signaling pathways.

BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH (2021)

Review Biochemistry & Molecular Biology

Toward unzipping the ZIP metal transporters: structure, evolution, and implications on drug discovery against cancer

Jian Hu

Summary: The ZIP protein family plays a crucial role in the uptake and homeostasis of essential trace elements, with some members also responsible for toxic metal absorption. Research has made rapid progress in areas such as structural biology, evolution, and drug discovery related to this family. Future studies aim to address prominent issues associated with transport and regulation mechanisms.

FEBS JOURNAL (2021)

Review Plant Sciences

Transcriptional integration of plant responses to iron availability

Fei Gao et al.

Summary: Plants tightly control iron uptake, translocation, assimilation, and storage through complex transcriptional regulatory networks, with the bHLH family of transcription factors playing a vital role. Research also involves other classes of transcription factors and post-translational mechanisms. Future research aims to further understand how plants precisely regulate iron homeostasis.

JOURNAL OF EXPERIMENTAL BOTANY (2021)

Article Plant Sciences

Redundant roles of four ZIP family members in zinc homeostasis and seed development in Arabidopsis thaliana

Sichul Lee et al.

Summary: The study demonstrated that IRT3, ZIP4, ZIP6, and ZIP9 in Arabidopsis thaliana function redundantly in maintaining zinc homeostasis and seed development, with single and higher-order mutants showing impaired growth to varying degrees.

PLANT JOURNAL (2021)

Review Biochemistry & Molecular Biology

Interactions of zinc- and redox-signaling pathways

Christopher Hubner et al.

Summary: Zinc and ROS play roles in various physiological functions and are connected through their interaction with sulfur, forming a triad. Zinc can translate redox signals into zinc signals by binding to and releasing from thiols, affecting thiol oxidation and protein activity. The reciprocal interaction between zinc and redox-signaling involves shared molecular targets like active site cysteine thiols in PTP, showcasing their complex interplay on multiple levels.

REDOX BIOLOGY (2021)

Article Biochemistry & Molecular Biology

Structural basis for zinc-induced activation of a zinc uptake transcriptional regulator

Fenmei Liu et al.

Summary: This study reports the structure and activation mechanism of the zinc uptake regulator in Xanthomonas campestris pv. campestris, highlighting the essential role of zinc atom binding in driving conformational changes.

NUCLEIC ACIDS RESEARCH (2021)

Article Plant Sciences

Transcriptional regulation of ZIP genes is independent of local zinc status in Brachypodium shoots upon zinc deficiency and resupply

Sahand Amini et al.

Summary: Study on the molecular events underlying zinc homeostasis in Brachypodium plants under varying zinc supply and resupply conditions revealed the key roles of zinc-responsive genes and transporter proteins. Root-to-shoot signals may mediate the overall plant responses to zinc resupply.

PLANT CELL AND ENVIRONMENT (2021)

Article Plant Sciences

Arabidopsis bZIP19 and bZIP23 act as zinc sensors to control plant zinc status

Grmay H. Lilay et al.

Summary: Zinc (Zn) is an essential micronutrient for plants and animals, but how plants sense zinc is poorly understood. Two Arabidopsis bZIP transcription factors previously shown to modulate plant responses to zinc deficiency are now identified as zinc sensors in this study.

NATURE PLANTS (2021)

Article Plant Sciences

Rice F-bZIP transcription factors regulate the zinc deficiency response

Grmay H. Lilay et al.

JOURNAL OF EXPERIMENTAL BOTANY (2020)

Review Plant Sciences

Chloroplast Transition Metal Regulation for Efficient Photosynthesis

Sidsel Birkelund Schmidt et al.

TRENDS IN PLANT SCIENCE (2020)

Review Biochemistry & Molecular Biology

Transcription factors and transporters in zinc homeostasis: lessons learned from fungi

David J. Eide

CRITICAL REVIEWS IN BIOCHEMISTRY AND MOLECULAR BIOLOGY (2020)

Review Plant Sciences

Metal ligands in micronutrient acquisition and homeostasis

Stephan Clemens

PLANT CELL AND ENVIRONMENT (2019)

Review Plant Sciences

FIT-Binding Proteins and Their Functions in the Regulation of Fe Homeostasis

Huilan Wu et al.

FRONTIERS IN PLANT SCIENCE (2019)

Review Plant Sciences

The Arabidopsis bZIP transcription factor family - an update

Wolfgang Droege-Laser et al.

CURRENT OPINION IN PLANT BIOLOGY (2018)

Article Biochemistry & Molecular Biology

Metal Sensing by the IRT1 Transporter-Receptor Orchestrates Its Own Degradation and Plant Metal Nutrition

Guillaume Dubeaux et al.

MOLECULAR CELL (2018)

Article Plant Sciences

A FIT-binding protein is involved in modulating iron and zinc homeostasis in Arabidopsis

Chun-Lin Chen et al.

PLANT CELL AND ENVIRONMENT (2018)

Review Biochemistry & Molecular Biology

Bacterial zinc uptake regulator proteins and their regulons

Alevtina Mikhaylina et al.

BIOCHEMICAL SOCIETY TRANSACTIONS (2018)

Article Biochemistry & Molecular Biology

The cellular economy of the Saccharomyces cerevisiae zinc proteome

Yirong Wang et al.

METALLOMICS (2018)

Article Plant Sciences

F-group bZIPs in barley-a role in Zn deficiency

Ahmad Zulhilmi Nazri et al.

PLANT CELL AND ENVIRONMENT (2017)

Article Biology

Combinatorial bZIP dimers display complex DNA-binding specificity landscapes

José A Rodríguez-Martínez et al.

eLife (2017)

Review Food Science & Technology

Improving nutrition through biofortification: A review of evidence from HarvestPlus, 2003 through 2016

Howarth E. Bouis et al.

GLOBAL FOOD SECURITY-AGRICULTURE POLICY ECONOMICS AND ENVIRONMENT (2017)

Article Biochemistry & Molecular Biology

The biological inorganic chemistry of zinc ions

Artur Krezel et al.

ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS (2016)

Review Biochemistry & Molecular Biology

Plant Ionomics: From Elemental Profiling to Environmental Adaptation

Xin-Yuan Huang et al.

MOLECULAR PLANT (2016)

Article Biochemistry & Molecular Biology

Metal binding to the N-terminal cytoplasmic domain of the PIB ATPase HMA4 is required for metal transport in Arabidopsis

Clementine Laurent et al.

PLANT MOLECULAR BIOLOGY (2016)

Article Chemistry, Multidisciplinary

Advances in the molecular understanding of biological zinc transport

Claudia A. Blindauer

CHEMICAL COMMUNICATIONS (2015)

Review Biochemistry & Molecular Biology

Cellular sensing and transport of metal ions: implications in micronutrient homeostasis

Amanda J. Bird

JOURNAL OF NUTRITIONAL BIOCHEMISTRY (2015)

Review Biochemistry & Molecular Biology

Metal Preferences and Metallation

Andrew W. Foster et al.

JOURNAL OF BIOLOGICAL CHEMISTRY (2014)

Review Plant Sciences

bZIPs and WRKYs: two large transcription factor families executing two different functional strategies

Carles M. Llorca et al.

FRONTIERS IN PLANT SCIENCE (2014)

Article Biochemistry & Molecular Biology

Nicotianamine is a major player in plant Zn homeostasis

Stephan Clemens et al.

BIOMETALS (2013)

Article Plant Sciences

Transport properties of members of the ZIP family in plants and their role in Zn and Mn homeostasis

Matthew J. Milner et al.

JOURNAL OF EXPERIMENTAL BOTANY (2013)

Review Biochemistry & Molecular Biology

The SLC39 family of zinc transporters

Jeeyon Jeong et al.

MOLECULAR ASPECTS OF MEDICINE (2013)

Review Biochemistry & Molecular Biology

Model of how plants sense zinc deficiency

Ana G. L. Assuncao et al.

METALLOMICS (2013)

Article Genetics & Heredity

MYB10 and MYB72 Are Required for Growth under Iron-Limiting Conditions

Christine M. Palmer et al.

PLOS GENETICS (2013)

Review Plant Sciences

Iron Uptake, Translocation, and Regulation in Higher Plants

Takanori Kobayashi et al.

ANNUAL REVIEW OF PLANT BIOLOGY, VOL 63 (2012)

Review Biochemistry & Molecular Biology

The zinc homeostasis network of land plants

Scott Aleksander Sinclair et al.

BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH (2012)

Review Biophysics

P-Type ATPases

Michael G. Palmgren et al.

ANNUAL REVIEW OF BIOPHYSICS, VOL 40 (2011)

Article Evolutionary Biology

Origin of land plants: Do conjugating green algae hold the key?

Sabina Wodniok et al.

BMC EVOLUTIONARY BIOLOGY (2011)

Article Biochemistry & Molecular Biology

A Combined Zinc/Cadmium Sensor and Zinc/Cadmium Export Regulator in a Heavy Metal Pump

Lone Baekgaard et al.

JOURNAL OF BIOLOGICAL CHEMISTRY (2010)

Review Biochemistry & Molecular Biology

Cytosolic zinc buffering and muffling: Their role in intracellular zinc homeostasis

Robert A. Colvin et al.

METALLOMICS (2010)

Article Biochemistry & Molecular Biology

The CRR1 Nutritional Copper Sensor in Chlamydomonas Contains Two Distinct Metal-Responsive Domains

Frederik Sommer et al.

PLANT CELL (2010)

Article Multidisciplinary Sciences

Arabidopsis thaliana transcription factors bZIP19 and bZIP23 regulate the adaptation to zinc deficiency

Ana G. L. Assuncao et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2010)

Review Chemistry, Multidisciplinary

Metalloproteomes: A Bioinformatic Approach

Claudia Andreini et al.

ACCOUNTS OF CHEMICAL RESEARCH (2009)

Review Chemistry, Multidisciplinary

Coordination Dynamics of Zinc in Proteins

Wolfgang Maret et al.

CHEMICAL REVIEWS (2009)

Review Biochemistry & Molecular Biology

Homeostatic and Adaptive Responses to Zinc Deficiency in Saccharomyces cerevisiae

David J. Eide

JOURNAL OF BIOLOGICAL CHEMISTRY (2009)

Review Multidisciplinary Sciences

Metalloproteins and metal sensing

Kevin J. Waldron et al.

NATURE (2009)

Review Plant Sciences

Copper homeostasis

Jason L. Burkhead et al.

NEW PHYTOLOGIST (2009)

Review Plant Sciences

Molecular mechanisms of metal hyperaccumulation in plants

Nathalie Verbruggen et al.

NEW PHYTOLOGIST (2009)

Article Biochemistry & Molecular Biology

SQUAMOSA Promoter Binding Protein-Like7 Is a Central Regulator for Copper Homeostasis in Arabidopsis

Hiroaki Yamasaki et al.

PLANT CELL (2009)

Review Plant Sciences

Post-translational regulation of plant bZIP factors

Katia Schuetze et al.

TRENDS IN PLANT SCIENCE (2008)

Article Biochemistry & Molecular Biology

One billion years of bZIP transcription factor evolution: Conservation and change in dimerization and DNA-binding site specificity

G. D. Amoutzias et al.

MOLECULAR BIOLOGY AND EVOLUTION (2007)

Review Plant Sciences

Zinc in plants

Martin R. Broadley et al.

NEW PHYTOLOGIST (2007)

Review Plant Sciences

Transporters of ligands for essential metal ions in plants

Michael J. Haydon et al.

NEW PHYTOLOGIST (2007)

Article Biochemical Research Methods

Zinc through the three domains of life

Claudia Andreini et al.

JOURNAL OF PROTEOME RESEARCH (2006)

Review Biochemistry & Molecular Biology

Deciphering B-ZIP transcription factor interactions in vitro and in vivo

Charles Vinson et al.

BIOCHIMICA ET BIOPHYSICA ACTA-GENE STRUCTURE AND EXPRESSION (2006)

Review Plant Sciences

MTP1 mops up excess zinc in Arabidopsis cells

U Krämer

TRENDS IN PLANT SCIENCE (2005)

Article Biochemistry & Molecular Biology

P-type ATPase heavy metal transporters with roles in essential zinc homeostasis in Arabidopsis

D Hussain et al.

PLANT CELL (2004)

Review Biochemistry & Molecular Biology

The ZIP family of metal transporters

ML Guerinot

BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES (2000)