Related references
Note: Only part of the references are listed.Variability for cell-wall and yield components in commercial sugarcane (Saccharum spp.) progeny: contrasts with parental lines and energy cane
Jose M. Garcia et al.
JOURNAL OF CROP IMPROVEMENT (2022)
Genomic insights into the recent chromosome reduction of autopolyploid sugarcane Saccharum spontaneum
Qing Zhang et al.
NATURE GENETICS (2022)
Sugarcane Breeding, Germplasm Development and Supporting Genetic Research in Argentina
Santiago Ostengo et al.
SUGAR TECH (2022)
rMVP: A Memory-efficient, Visualization-enhanced, and Parallel-accelerated Tool for Genome-wide Association Study
Lilin Yin et al.
GENOMICS PROTEOMICS & BIOINFORMATICS (2021)
Fine-tuning the performance of ddRAD-seq in the peach genome
Maximiliano Martin Aballay et al.
SCIENTIFIC REPORTS (2021)
Development of novel SSR molecular markers using a Next-Generation Sequencing approach (ddRADseq) in Stetsonia coryne (Cactaceae)
Angela Veronica Gutierrez et al.
ANAIS DA ACADEMIA BRASILEIRA DE CIENCIAS (2021)
Role of NGS and SNP genotyping methods in sugarcane improvement programs
Ramaswamy Manimekalai et al.
CRITICAL REVIEWS IN BIOTECHNOLOGY (2020)
Optimizing ddRADseq in Non-Model Species: A Case Study in Eucalyptus dunnii Maiden
Natalia Cristina Aguirre et al.
AGRONOMY-BASEL (2019)
Genome-wide association mapping identifies markers associated with cane yield components and sucrose traits in the Louisiana sugarcane core collection
Nathanael Fickett et al.
GENOMICS (2019)
The Sorghum bicolor reference genome: improved assembly, gene annotations, a transcriptome atlas, and signatures of genome organization
Ryan F. McCormick et al.
PLANT JOURNAL (2018)
A mosaic monoploid reference sequence for the highly complex genome of sugarcane
Olivier Garsmeur et al.
NATURE COMMUNICATIONS (2018)
Tools for Genetic Studies in Experimental Populations of Polyploids
Peter M. Bourke et al.
FRONTIERS IN PLANT SCIENCE (2018)
Revisiting Meiosis in Sugarcane: Chromosomal Irregularities and the Prevalence of Bivalent Configurations
Maria Lucia C. Vieira et al.
FRONTIERS IN GENETICS (2018)
VCFR: a package to manipulate and visualize variant call format data in R
Brian J. Knaus et al.
MOLECULAR ECOLOGY RESOURCES (2017)
Pedigree comparison highlights genetic similarities and potential industrial values of sugarcane cultivars
A. Acevedo et al.
EUPHYTICA (2017)
Deriving genotypes from RAD-seq short-read data using Stacks
Nicolas C. Rochette et al.
NATURE PROTOCOLS (2017)
Mining sequence variations in representative polyploid sugarcane germplasm accessions
Xiping Yang et al.
BMC GENOMICS (2017)
GBS-based single dosage markers for linkage and QTL mapping allow gene mining for yield-related traits in sugarcane
Thiago Willian Almeida Balsalobre et al.
BMC GENOMICS (2017)
SWEEP: A Tool for Filtering High-Quality SNPs in Polyploid Crops
Josh P. Clevenger et al.
G3-GENES GENOMES GENETICS (2015)
Stacks: an analysis tool set for population genomics
Julian Catchen et al.
MOLECULAR ECOLOGY (2013)
Lignification in Sugarcane: Biochemical Characterization, Gene Discovery, and Expression Analysis in Two Genotypes Contrasting for Lignin Content
Alexandra Bottcher et al.
PLANT PHYSIOLOGY (2013)
SNP genotyping allows an in-depth characterisation of the genome of sugarcane and other complex autopolyploids
Antonio A. F. Garcia et al.
SCIENTIFIC REPORTS (2013)
Fast gapped-read alignment with Bowtie 2
Ben Langmead et al.
NATURE METHODS (2012)
Efficient Exact Maximum a Posteriori Computation for Bayesian SNP Genotyping in Polyploids
Oliver Serang et al.
PLOS ONE (2012)
Double Digest RADseq: An Inexpensive Method for De Novo SNP Discovery and Genotyping in Model and Non-Model Species
Brant K. Peterson et al.
PLOS ONE (2012)
The variant call format and VCFtools
Petr Danecek et al.
BIOINFORMATICS (2011)
pegas: an R package for population genetics with an integrated-modular approach
Emmanuel Paradis
BIOINFORMATICS (2010)
TASSEL: software for association mapping of complex traits in diverse samples
Peter J. Bradbury et al.
BIOINFORMATICS (2007)
Share Paper
