Related references
Note: Only part of the references are listed.Recognition of tRNAIle with a UAU anticodon by isoleucyl-tRNA synthetase in lactic acid bacteria
Gakuto Uesugi et al.
FEBS JOURNAL (2022)
Commonality and diversity in tRNA substrate recognition in t6A biogenesis by eukaryotic KEOPSs
Jin-Tao Wang et al.
NUCLEIC ACIDS RESEARCH (2022)
MODOMICS: a database of RNA modification pathways. 2021 update
Pietro Boccaletto et al.
NUCLEIC ACIDS RESEARCH (2022)
Switching a conflicted bacterial DTD-tRNA code is essential for the emergence of mitochondria
Jotin Gogoi et al.
SCIENCE ADVANCES (2022)
Required Elements in tRNA for Methylation by the Eukaryotic tRNA (Guanine-N2-) Methyltransferase (Trm11-Trm112 Complex)
Yu Nishida et al.
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES (2022)
Evolutionary Adjustment of tRNA Identity Rules in Bacillariophyta for Recognition by an Aminoacyl-tRNA Synthetase Adds a Facet to the Origin of Diatoms
Gabor L. Igloi
JOURNAL OF MOLECULAR EVOLUTION (2022)
The tRNA discriminator base defines the mutual orthogonality of two distinct pyrrolysyl-tRNA synthetase/tRNA(Pyl) pairs in the same organism
Haolin Zhang et al.
NUCLEIC ACIDS RESEARCH (2022)
Eukaryotic tRNA sequences present conserved and amino acid-specific structural signatures
Eric Westhof et al.
NUCLEIC ACIDS RESEARCH (2022)
Chiral proofreading during protein biosynthesis and its evolutionary implications
Pradeep Kumar et al.
FEBS LETTERS (2022)
Crystal structure of the Ate1 arginyl-tRNA-protein transferase and arginylation of N-degron substrates
Bong Heon Kim et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2022)
Ancestral archaea expanded the genetic code with pyrrolysine
Li -Tao Guo et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2022)
PlantRNA 2.0: an updated database dedicated to tRNAs of photosynthetic eukaryotes
Valerie Cognat et al.
PLANT JOURNAL (2022)
Structural basis for shape-selective recognition and aminoacylation of a D-armless human mitochondrial tRNA
Bernhard Kuhle et al.
NATURE COMMUNICATIONS (2022)
Transfer RNAs: diversity in form and function
Matthew D. Berg et al.
RNA BIOLOGY (2021)
Structural diversity and phylogenetic distribution of valyl tRNA-like structures in viruses
Madeline E. Sherlock et al.
RNA (2021)
Coding triplets in the tRNA acceptor-TψC arm and their role in present and past tRNA recognition
Ilana Agmon et al.
FEBS LETTERS (2021)
RNA modifications as a common denominator between tRNA and mRNA
Ofri Levi et al.
CURRENT GENETICS (2021)
Human transfer RNA modopathies: diseases caused by aberrations in transfer RNA modifications
Takeshi Chujo et al.
FEBS JOURNAL (2021)
The molecular pathology of pathogenic mitochondrial tRNA variants
Uwe Richter et al.
FEBS LETTERS (2021)
Evolutionary repair reveals an unexpected role of the tRNA modification m1G37 in aminoacylation
Ben E. Clifton et al.
NUCLEIC ACIDS RESEARCH (2021)
The expanding world of tRNA modifications and their disease relevance
Tsutomu Suzuki
NATURE REVIEWS MOLECULAR CELL BIOLOGY (2021)
A viral RNA hijacks host machinery using dynamic conformational changes of a tRNA-like structure
Steve L. Bonilla et al.
SCIENCE (2021)
Molecular basis of glycyl-tRNAGly acetylation by TacT from Salmonella Typhimurium
Yuka Yashiro et al.
CELL REPORTS (2021)
An expanded class of histidine-accepting viral tRNA-like structures
Conner J. Langeberg et al.
RNA (2021)
New substrates and determinants for tRNA recognition of RNA methyltransferase DNMT2/TRDMT1
Huari Li et al.
RNA BIOLOGY (2021)
Novel Structural Variation and Evolutionary Characteristics of Chloroplast tRNA in Gossypium Plants
Ting-Ting Zhang et al.
GENES (2021)
Hopeful monsters: unintended sequencing of famously malformed mite mitochondrial tRNAs reveals widespread expression and processing of sense-antisense pairs
Jessica M. Warren et al.
NAR GENOMICS AND BIOINFORMATICS (2021)
Information theory unveils the evolution of tRNA identity elements in the three domains of life
Gabriel S. Zamudio et al.
THEORY IN BIOSCIENCES (2020)
Archaeosine Modification of Archaeal tRNA: Role in Structural Stabilization
Ben Turner et al.
JOURNAL OF BACTERIOLOGY (2020)
Crystal structures of an unmodified bacterial tRNA reveal intrinsic structural flexibility and plasticity as general properties of unbound tRNAs
Clarence W. Chan et al.
RNA (2020)
Relaxed sequence constraints favor mutational freedom in idiosyncratic metazoan mitochondrial tRNAs
Bernhard Kuhle et al.
NATURE COMMUNICATIONS (2020)
Aminoacyl-tRNA synthetases
Miguel Angel Rubio Gomez et al.
RNA (2020)
G:U-Independent RNA Minihelix Aminoacylation by Nanoarchaeum equitans Alanyl-tRNA Synthetase: An Insight into the Evolution of Aminoacyl-tRNA Synthetases
Misa Arutaki et al.
JOURNAL OF MOLECULAR EVOLUTION (2020)
Cross-editing by a tRNA synthetase allows vertebrates to abundantly express mischargeable tRNA without causing mistranslation
Meirong Chen et al.
NUCLEIC ACIDS RESEARCH (2020)
The tRNA-like small noncoding RNA mascRNA promotes global protein translation
Xinping Lu et al.
EMBO REPORTS (2020)
RNA abasic sites in yeast and human cells
Yaojuan Liu et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2020)
The challenge of Coccidae (Hemiptera: Coccoidea) mitochondrial genomes: The case of Saissetia coffeae with novel truncated tRNAs and gene rearrangements
Congcong Lu et al.
INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES (2020)
On the expanding roles of tRNA fragments in modulating cell behavior
Rogan Magee et al.
NUCLEIC ACIDS RESEARCH (2020)
Complete chemical structures of human mitochondrial tRNAs
Takeo Suzuki et al.
NATURE COMMUNICATIONS (2020)
Recent Advances in Archaeal Translation Initiation
Emmanuelle Schmitt et al.
FRONTIERS IN MICROBIOLOGY (2020)
Naturally Occurring tRNAs With Non-canonical Structures
Natalie Krahn et al.
FRONTIERS IN MICROBIOLOGY (2020)
Genomic and evolutionary aspects of chloroplast tRNA in monocot plants
Tapan Kumar Mohanta et al.
BMC PLANT BIOLOGY (2019)
The G3-U70-independent tRNA recognition by human mitochondrial alanyl-tRNA synthetase
Qi-Yu Zeng et al.
NUCLEIC ACIDS RESEARCH (2019)
Matching tRNA modifications in humans to their known and predicted enzymes
Valerie de Crecy-Lagard et al.
NUCLEIC ACIDS RESEARCH (2019)
Plasticity and Constraints of tRNA Aminoacylation Define Directed Evolution of Aminoacyl-tRNA Synthetases
Ana Crnkovic et al.
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES (2019)
tRNAviz: explore and visualize tRNA sequence features
Brian Y. Lin et al.
NUCLEIC ACIDS RESEARCH (2019)
Match fitness landscapes for macromolecular interaction networks: Selection for translational accuracy and rate can displace tRNA-binding interfaces of non-cognate aminoacyl-tRNA synthetases
Andrea I. Collins-Hed et al.
THEORETICAL POPULATION BIOLOGY (2019)
mRNA association by aminoacyl tRNA synthetase occurs at a putative anticodon mimic and autoregulates translation in response to tRNA levels
Ofri Levi et al.
PLOS BIOLOGY (2019)
Naturally occurring dual recognition of tRNAHis substrates with and without a universal identity element
Yi-Hsueh Lee et al.
RNA BIOLOGY (2019)
Arm-less mitochondrial tRNAs conserved for over 30 millions of years in spiders
Joan Pons et al.
BMC GENOMICS (2019)
Stereospecificity control in aminoacyl-tRNA-synthetases: new evidence of D-amino acids activation and editing
Mariia Yu Rybak et al.
NUCLEIC ACIDS RESEARCH (2019)
Principles of tRNAAla Selection by Alanyl-tRNA Synthetase Based on the Critical G3.U70 Base Pair
Amit Kumar et al.
ACS OMEGA (2019)
Chiral checkpoints during protein biosynthesis
Santosh Kumar Kuncha et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2019)
Pathways to disease from natural variations in human cytoplasmic tRNAs
Jeremy T. Lant et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2019)
Alanyl-tRNA Synthetase Quality Control Prevents Global Dysregulation of the Escherichia coli Proteome
Paul Kelly et al.
MBIO (2019)
Characterization of redundant tRNA(Ile)s with CAU and UAU anticodons in Lactobacillus plantarum
Chie Tomikawa et al.
JOURNAL OF BIOCHEMISTRY (2018)
The emerging complexity of the tRNA world: mammalian tRNAs beyond protein synthesis
Paul Schimmel
NATURE REVIEWS MOLECULAR CELL BIOLOGY (2018)
Editing activity for eliminating mischarged tRNAs is essential in mammalian mitochondria
Taru Hilander et al.
NUCLEIC ACIDS RESEARCH (2018)
Identity Elements of tRNA as Derived from Information Analysis
Gabriel S. Zamudio et al.
ORIGINS OF LIFE AND EVOLUTION OF BIOSPHERES (2018)
Quality control by trans-editing factor prevents global mistranslation of non-protein amino acid -aminobutyrate
Jo Marie Bacusmo et al.
RNA BIOLOGY (2018)
tRNAPyl: Structure, function, and applications
Jeffery M. Tharp et al.
RNA BIOLOGY (2018)
Transfer RNA-derived fragments target and regulate ribosome-associated aminoacyl-transfer RNA synthetases
Anna M. Mleczko et al.
BIOCHIMICA ET BIOPHYSICA ACTA-GENE REGULATORY MECHANISMS (2018)
Kinetic Origin of Substrate Specificity in Post-Transfer Editing by Leucyl-tRNA Synthetase
Morana Dulic et al.
JOURNAL OF MOLECULAR BIOLOGY (2018)
Structure of Escherichia coli Arginyl-tRNA Synthetase in Complex with tRNAArg: Pivotal Role of the D-loop
Preyesh Stephen et al.
JOURNAL OF MOLECULAR BIOLOGY (2018)
Small but large enough: structural properties of armless mitochondrial tRNAs from the nematode Romanomermis culicivorax
Tina Juehling et al.
NUCLEIC ACIDS RESEARCH (2018)
Conditional accumulation of toxic tRNAs to cause amino acid misincorporation
Stephanie M. Zimmerman et al.
NUCLEIC ACIDS RESEARCH (2018)
Distinct ways of G:U recognition by conserved tRNA binding motifs
Yeeting E. Chong et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2018)
Systematic Analysis of the Binding Surfaces between tRNAs and Their Respective Aminoacyl tRNA Synthetase Based on Structural and Evolutionary Data
Satoshi Tamaki et al.
FRONTIERS IN GENETICS (2018)
Repertoires of tRNAs: The Couplers of Genomics and Proteomics
Roni Rak et al.
ANNUAL REVIEW OF CELL AND DEVELOPMENTAL BIOLOGY, VOL 34 (2018)
Designing seryl-tRNA synthetase for improved serylation of selenocysteine tRNAs
Xian Fu et al.
FEBS LETTERS (2018)
Plasmodium apicoplast tyrosyl-tRNA synthetase recognizes an unusual, simplified identity set in cognate tRNATyr
Marta Cela et al.
PLOS ONE (2018)
Function and origin of mistranslation in distinct cellular contexts
Michael H. Schwartz et al.
CRITICAL REVIEWS IN BIOCHEMISTRY AND MOLECULAR BIOLOGY (2017)
GtRNAdb 2.0: an expanded database of transfer RNA genes identified in complete and draft genomes
Patricia P. Chan et al.
NUCLEIC ACIDS RESEARCH (2016)
A Human Disease-causing Point Mutation in Mitochondrial Threonyl-tRNA Synthetase Induces Both Structural and Functional Defects
Yong Wang et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2016)
Evolutionary Gain of Alanine Mischarging to Noncognate tRNAs with a G4:U69 Base Pair
Litao Sun et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2016)
Point mutation in mitochondrial tRNA gene is associated with polycystic ovary syndrome and insulin resistance
Yu Ding et al.
MOLECULAR MEDICINE REPORTS (2016)
An integrated, structure- and energy-based view of the genetic code
Henri Grosjean et al.
NUCLEIC ACIDS RESEARCH (2016)
The Enzymatic Paradox of Yeast Arginyl-tRNA Synthetase: Exclusive Arginine Transfer Controlled by a Flexible Mechanism of tRNA Recognition
Ariel McShane et al.
PLOS ONE (2016)
Translation quality control is critical for bacterial responses to amino acid stress
Tammy J. Bullwinkle et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2016)
Identifying the ligated amino acid of archaeal tRNAs based on positions outside the anticodon
Tal Galili et al.
RNA (2016)
Biogenesis and Function of Transfer RNA-Related Fragments (tRFs)
Pankaj Kumar et al.
TRENDS IN BIOCHEMICAL SCIENCES (2016)
Pathogenic mitochondrial mt-tRNAAla variants are uniquely associated with isolated myopathy
Diana Lehmann et al.
EUROPEAN JOURNAL OF HUMAN GENETICS (2015)
MD Simulations of tRNA and Aminoacyl-tRNA Synthetases: Dynamics, Folding, Binding, and Allostery
Rongzhong Li et al.
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES (2015)
Modulation of Aminoacylation and Editing Properties of Leucyl-tRNA Synthetase by a Conserved Structural Module
Wei Yan et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2015)
Functional Class I and II Amino Acid-activating Enzymes Can Be Coded by Opposite Strands of the Same Gene
Luis Martinez-Rodriguez et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2015)
Essentiality of threonylcarbamoyladenosine (t6A), a universal tRNA modification, in bacteria
Patrick C. Thiaville et al.
MOLECULAR MICROBIOLOGY (2015)
Structural basis for recognition of G-1-containing tRNA by histidyl-tRNA synthetase
Qingnan Tian et al.
NUCLEIC ACIDS RESEARCH (2015)
Homologous trans-editing factors with broad tRNA specificity prevent mistranslation caused by serine/threonine misactivation
Ziwei Liu et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2015)
Identification of determinants for tRNA substrate recognition by Escherichia coli C/U34 2′-O-methyltransferase
Mi Zhou et al.
RNA BIOLOGY (2015)
Cutting, dicing, healing and sealing: the molecular surgery of tRNA
Raphael R. S. Lopes et al.
WILEY INTERDISCIPLINARY REVIEWS-RNA (2015)
Cytosine methylation of tRNA-Asp by DNMT2 has a role in translation of proteins containing poly-Asp sequences
Raghuvaran Shanmugam et al.
CELL DISCOVERY (2015)
Life without post-transcriptional addition of G-1: two alternatives for tRNAHis identity in Eukarya
Bhalchandra S. Rao et al.
RNA (2015)
Novel and unique domains in aminoacyl-tRNA synthetases from human fungal pathogens Aspergillus niger, Candida albicans and Cryptococcus neoformans
Manish Datt et al.
BMC GENOMICS (2014)
Mistranslation of the genetic code
Adil Moghal et al.
FEBS LETTERS (2014)
Coevolution of Specificity Determinants in Eukaryotic Glutamyl- and Glutaminyl-tRNA Synthetases
Andrew Hadd et al.
JOURNAL OF MOLECULAR BIOLOGY (2014)
The structural basis of transfer RNA mimicry and conformational plasticity by a viral RNA
Timothy M. Colussi et al.
NATURE (2014)
Deficiencies in tRNA synthetase editing activity cause cardioproteinopathy
Ye Liu et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2014)
Identity elements for the aminoacylation of metazoan mitochondrial tRNAArg have been widely conserved throughout evolution and ensure the fidelity of the AGR codon reassignment
Gabor L. Igloi et al.
RNA BIOLOGY (2014)
A bridge between the aminoacylation and editing domains of leucyl-tRNA synthetase is crucial for its synthetic activity
Qian Huang et al.
RNA (2014)
tRNA anticodon shifts in eukaryotic genomes
Hubert H. Rogers et al.
RNA (2014)
Welcome to the new tRNA world!
Akio Kanai
FRONTIERS IN GENETICS (2014)
tRNAs as regulators of biological processes
Medha Raina et al.
FRONTIERS IN GENETICS (2014)
tRNADB-CE: tRNA gene database well-timed in the era of big sequence data
Takashi Abe et al.
Frontiers in Genetics (2014)
Adaptive Translation as a Mechanism of Stress Response and Adaptation
Tao Pan
ANNUAL REVIEW OF GENETICS, VOL 47 (2013)
Substrate recognition and fidelity of maize seryl-tRNA synthetases
Jasmina Rokov-Plavec et al.
ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS (2013)
Direction of aminoacylated transfer RNAs into antibiotic synthesis and peptidoglycan-mediated antibiotic resistance
Jennifer Shepherd et al.
FEBS LETTERS (2013)
Amino acid discrimination by the nuclear encoded mitochondrial arginyl-tRNA synthetase of the larva of a bruchid beetle (Caryedes brasiliensis) from northwestern Costa Rica
Anne-Katrin Leisinger et al.
INSECT BIOCHEMISTRY AND MOLECULAR BIOLOGY (2013)
Aminoacylation of Plasmodium falciparum tRNAAsn and Insights in the Synthesis of Asparagine Repeats
Denis Filisetti et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2013)
Thermodynamic properties distinguish human mitochondrial aspartyl-tRNA synthetase from bacterial homolog with same 3D architecture
Anne Neuenfeldt et al.
NUCLEIC ACIDS RESEARCH (2013)
The Yin and Yang of tRNA: proper binding of acceptor end determines the catalytic balance of editing and aminoacylation
Min Tan et al.
NUCLEIC ACIDS RESEARCH (2013)
Reversion of a fungal genetic code alteration links proteome instability with genomic and phenotypic diversification
Ana R. Bezerra et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2013)
An Incompatibility between a Mitochondrial tRNA and Its Nuclear-Encoded tRNA Synthetase Compromises Development and Fitness in Drosophila
Colin D. Meiklejohn et al.
PLOS GENETICS (2013)
Mapping Hidden Potential Identity Elements by Computing the Average Discriminating Power of Individual tRNA Positions
Aron Szenes et al.
DNA RESEARCH (2012)
The influence of identity elements on the aminoacylation of tRNAArg by plant and Escherichia coli arginyl-tRNA synthetases
Carolin A. Aldinger et al.
FEBS JOURNAL (2012)
Coordination of tRNA Synthetase Active Sites for Chemical Fidelity
Michal T. Boniecki et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2012)
Crystal Structure of Human Mitochondrial PheRS Complexed with tRNAPhe in the Active Open State
Liron Klipcan et al.
JOURNAL OF MOLECULAR BIOLOGY (2012)
tRNAHis-guanylyltransferase establishes tRNAHis identity
Ilka U. Heinemann et al.
NUCLEIC ACIDS RESEARCH (2012)
In vivo identification of essential nucleotides in tRNALeu to its functions by using a constructed yeast tRNALeu knockout strain
Qian Huang et al.
NUCLEIC ACIDS RESEARCH (2012)
Structure of transfer RNAs: similarity and variability
Richard Giege et al.
WILEY INTERDISCIPLINARY REVIEWS-RNA (2012)
Quality control in tRNA charging
Hieronim Jakubowski
WILEY INTERDISCIPLINARY REVIEWS-RNA (2012)
Human Mitochondrial tRNAs: Biogenesis, Function, Structural Aspects, and Diseases
Tsutomu Suzuki et al.
ANNUAL REVIEW OF GENETICS, VOL 45 (2011)
Allosteric Communication in Cysteinyl tRNA Synthetase A NETWORK OF DIRECT AND INDIRECT READOUT
Amit Ghosh et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2011)
Change of tRNA identity leads to a divergent orthogonal histidyl-tRNA synthetase/tRNAHis pair
Jing Yuan et al.
NUCLEIC ACIDS RESEARCH (2011)
Misacylation of specific nonmethionyl tRNAs by a bacterial methionyl-tRNA synthetase
Thomas E. Jones et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2011)
Naturally occurring aminoacyl-tRNA synthetases editing-domain mutations that cause mistranslation in Mycoplasma parasites
Li Li et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2011)
Tuning the affinity of aminoacyl-tRNA to elongation factor Tu for optimal decoding
Jared M. Schrader et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2011)
Heat Maps for Intramolecular Communication in an RNP Enzyme Encoding Glutamine
Annia Rodriguez-Hernandez et al.
STRUCTURE (2011)
Crystal structure of a transfer-ribonucleoprotein particle that promotes asparagine formation
Mickael Blaise et al.
EMBO JOURNAL (2010)
Computational analysis of tRNA identity
David H. Ardell
FEBS LETTERS (2010)
Diversity and similarity in the tRNA world: Overall view and case study on malaria-related tRNAs
Joern Puetz et al.
FEBS LETTERS (2010)
Two enzymes bound to one transfer RNA assume alternative conformations for consecutive reactions
Takuhiro Ito et al.
NATURE (2010)
Agmatine-conjugated cytidine in a tRNA anticodon is essential for AUA decoding in archaea
Yoshiho Ikeuchi et al.
NATURE CHEMICAL BIOLOGY (2010)
Viral tRNAs and tRNA-like structures
Theo W. Dreher
WILEY INTERDISCIPLINARY REVIEWS-RNA (2010)
How Nature Morphs Peptide Scaffolds into Antibiotics
Elizabeth M. Nolan et al.
CHEMBIOCHEM (2009)
Molecular Recognition of Tryptophan tRNA by Tryptophanyl-tRNA Synthetase from Aeropyrum pernix K1
Wataru Tsuchiya et al.
JOURNAL OF BIOCHEMISTRY (2009)
Pyrrolysyl-tRNA synthetase-tRNAPyl structure reveals the molecular basis of orthogonality
Kayo Nozawa et al.
NATURE (2009)
Recognition of tRNAGln by Helicobacter pylori GluRS2-a tRNAGln-specific glutamyl-tRNA synthetase
Keng-Ming Chang et al.
NUCLEIC ACIDS RESEARCH (2009)
tRNAdb 2009: compilation of tRNA sequences and tRNA genes
Frank Juehling et al.
NUCLEIC ACIDS RESEARCH (2009)
Pathology-related mutation A7526G (A9G) helps in the understanding of the 3D structural core of human mitochondrial tRNAAsp
Marie Messmer et al.
RNA (2009)
Unique residues crucial for optimal editing in yeast cytoplasmic leucyl-tRNA synthetase are revealed by using a novel knockout yeast strain
Peng Yao et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2008)
Redundant synthesis of cysteinyl-tRNACys in Methanosarcina mazei
Scott I. Hauenstein et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2008)
The homotetrameric phosphoseryl-tRNA synthetase from Methanosarcina mazei exhibits half-of-the-sites activity
Scott I. Hauenstein et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2008)
Toward a more complete view of tRNA biology
Richard Giege
NATURE STRUCTURAL & MOLECULAR BIOLOGY (2008)
Aminoacylation of tRNA with phosphoserine for synthesis of cysteinyl-tRNACys
Chun-Mei Zhang et al.
NATURE STRUCTURAL & MOLECULAR BIOLOGY (2008)
Evolution of acceptor stem tRNA recognition by class II prolyl-tRNA synthetase
Songon An et al.
NUCLEIC ACIDS RESEARCH (2008)
Recognition of tRNA(Leu) by Aquifex aeolicus leucyl-tRNA synthetase during the aminoacylation and editing steps
Peng Yao et al.
NUCLEIC ACIDS RESEARCH (2008)
Quality control despite mistranslation caused by an ambiguous genetic code
Benfang Ruan et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2008)
RNA-dependent lipid remodeling by bacterial multiple peptide resistance factors
Herve Roy et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2008)
Development of tRNA synthetases and connection to genetic code and disease
Paul Schimmel
PROTEIN SCIENCE (2008)
The transamidosome: A dynamic ribonucleoprotein particle dedicated to prokaryotic tRNA-Dependent asparagine biosynthesis
Marc Bailly et al.
MOLECULAR CELL (2007)
New computational methods reveal tRNA identity element divergence between proteobacteria and cyanobacteria
Eva Freyhult et al.
BIOCHIMIE (2007)
Mamit-tRNA, a database of mammalian mitochondrial tRNA primary and secondary structures
Joern Putz et al.
RNA (2007)
In silico detection of tRNA sequence features characteristics to aminoacyl-tRNA synthetase class membership
Eena Jako et al.
NUCLEIC ACIDS RESEARCH (2007)
The 51-63 base pair of tRNA confers specificity for binding by EF-Tu
Lee E. Sanderson et al.
RNA (2007)
Structural elements defining elongation factor Tu mediated suppression of codon ambiguity
Herve Roy et al.
NUCLEIC ACIDS RESEARCH (2007)
Pyrrolysine is not hardwired for cotranslational insertion at UAG codons
Alexandre Ambrogelly et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2007)
Kinetic discrimination of tRNA identity by the conserved motif 2 loop of a class II aminoacyl-tRNA synthetase
Ethan C. Guth et al.
MOLECULAR CELL (2007)
Functional association between three archaeal aminoacyl-tRNA synthetases
Mette Praetorius-Ibba et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2007)
Recognition of pyrrolysine tRNA by the Desulfitobacterium hafniense pyrrolysyl-tRNA synthetase
Stephanie Herring et al.
NUCLEIC ACIDS RESEARCH (2007)
Structural basis for recognition of cognate tRNA by tyrosyl-tRNA synthetase from three kingdoms
Masaru Tsunoda et al.
NUCLEIC ACIDS RESEARCH (2007)
RNA-dependent conversion of phosphoserine forms selenocysteine in eukaryotes and archaea
Jing Yuan et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2006)
A single tRNA base pair mediates bacterial tRNA-dependent biosynthesis of asparagine
Marc Bailly et al.
NUCLEIC ACIDS RESEARCH (2006)
Emergence of the universal genetic code imprinted in an RNA record
Michael J. Hohn et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2006)
Editing-defective tRNA synthetase causes protein misfolding and neurodegeneration
Jeong Woong Lee et al.
NATURE (2006)
The crystal structure of the ternary complex of phenylalanyl-tRNA synthetase with tRNAPhe and a phenylalanyl-adenylate analogue reveals a conformational switch of the CCA end
Nina Moor et al.
BIOCHEMISTRY (2006)
Identity elements for specific aminoacylation of a tRNA by mammalian lysyl-tRNA synthetase bearing a nonspecific tRNA-interacting factor
Mathilde Francin et al.
BIOCHEMISTRY (2006)
Shuffling of discrete tRNASer regions reveals differently utilized identity elements in yeast and methanogenic archaea
Ita Gruic-Sovulj et al.
JOURNAL OF MOLECULAR BIOLOGY (2006)
Loss of a primordial identity element for a mammalian mitochondrial aminoacylation system
Aurelie Fender et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2006)
Identity elements required for enzymatic formation of N2, N2-dimethylguanosine from N2-monomethylated derivative and its possible role in avoiding alternative conformations in archaeal tRNA
J Urbonavicius et al.
JOURNAL OF MOLECULAR BIOLOGY (2006)
Pure myopathy associated with a novel mitochondrial tRNA gene mutation
H Swalwell et al.
NEUROLOGY (2006)
Crystal structures of tyrosyl-tRNA synthetases from Archaea
M Kuratani et al.
JOURNAL OF MOLECULAR BIOLOGY (2006)
Visualizing bacterial tRNA identity determinants and antideterminants using function logos and inverse function logos
E Freyhult et al.
NUCLEIC ACIDS RESEARCH (2006)
A base pair at the bottom of the anticodon stem is reciprocally preferred for discrimination of cognate tRNAs by Escherichia coli lysyl- and glutaminyl-tRNA synthetases
Jun-ichi Fukunaga et al.
NUCLEIC ACIDS RESEARCH (2006)
TFAM detects co-evolution of tRNA identity rules with lateral transfer of histidyl-tRNA synthetase
DH Ardell et al.
NUCLEIC ACIDS RESEARCH (2006)
The evolutionary history of Cys-tRNACys formation
P O'Donoghue et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2005)
Determinants in tRNA for activation of arginyl-tRNA synthetase: Evidence that tRNA flexibility is required for the induced-fit mechanism
L Guigou et al.
BIOCHEMISTRY (2005)
An intricate RNA structure with two tRNA-derived motifs directs complex formation between yeast aspartyl-tRNA synthetase and its mRNA
M Ryckelynck et al.
JOURNAL OF MOLECULAR BIOLOGY (2005)
Dual-mode recognition of noncanonical tRNAsSer by seryl-tRNA synthetase in mammalian mitochondria
S Chimnaronk et al.
EMBO JOURNAL (2005)
Evolution of the tRNATYr/TyrRS aminoacylation systems
L Bonnefond et al.
BIOCHIMIE (2005)
Identity elements of archaeal tRNA
Bibekanand Mallick et al.
DNA RESEARCH (2005)
Association between archaeal prolyl- and leucyl-tRNA synthetases enhances tRNAPro aminoacylation
M Praetorius-Ibba et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2005)
Transfer RNA recognition by class I lysyl-tRNA synthetase from the Lyme disease pathogen Borrelia burgdorferi
A Arribrogelly et al.
FEBS LETTERS (2005)
Human mitochondrial TyrRS disobeys the tyrosine identity rules
L Bonnefond et al.
RNA (2005)
RNA-Dependent cysteine biosynthesis in archaea
A Sauerwald et al.
SCIENCE (2005)
Modification at position 9 with 1-methyladenosine is crucial for structure and function of nematode mitochondrial tRNAs lacking the entire T-arm
M Sakurai et al.
NUCLEIC ACIDS RESEARCH (2005)
Positional recognition of a tRNA determinant dependent on a peptide insertion
MA Lovato et al.
MOLECULAR CELL (2004)
Functional group recognition at the aminoacylation and editing sites of E-coli valyl-tRNA synthetase
KD Tardif et al.
RNA (2004)
Atypical archaeal tRNA pyrrolysine transcript behaves towards EF-Tu as a typical elongator tRNA
A Théobald-Dietrich et al.
NUCLEIC ACIDS RESEARCH (2004)
Recognition of G-1:C73 atomic groups by Escherichia coli histidyl-tRNA synthetase
AE Rosen et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2004)
A freestanding proofreading domain is required for protein synthesis quality control in Archaea
D Korencic et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2004)
Archaea recruited D-Tyr-tRNATyr deacylase for editing in Thr-tRNA synthetase
DJ Rigden
RNA (2004)
Differential modes of transfer RNASer recognition in Methanosarcina barkeri
D Korencic et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2004)
A yeast arginine specific tRNA is a remnant aspartate acceptor
A Fender et al.
NUCLEIC ACIDS RESEARCH (2004)
Shape-selective RNA recognition by cysteinyl-tRNA synthetase
S Hauenstein et al.
NATURE STRUCTURAL & MOLECULAR BIOLOGY (2004)
Recognition of human mitochondrial tRNA Leu(UUR) by its cognate leucyl-tRNA synthetase
N Sohm et al.
JOURNAL OF MOLECULAR BIOLOGY (2004)
The complete mitochondrial genome sequence of the spider Habronattus oregonensis reveals rearranged and extremely truncated tRNAs
SE Masta et al.
MOLECULAR BIOLOGY AND EVOLUTION (2004)
Trans-editing of mischarged tRNAs
I Ahel et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2003)
tRNAHis maturation:: An essential yeast protein catalyzes addition of a guanine nucleotide to the 5′ end of tRNAHis
WF Gu et al.
GENES & DEVELOPMENT (2003)
Coevolution of an aminoacyl-tRNA synthetase with its tRNA substrates
JC Salazar et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2003)
Human mitochondrial tRNAs in health and disease
C Florentz et al.
CELLULAR AND MOLECULAR LIFE SCIENCES (2003)
Tertiary structure base pairs between D- and TψC-loops of Escherichia coli tRNALeu play important roles in both aminoacylation and editing
X Du et al.
NUCLEIC ACIDS RESEARCH (2003)
Towards understanding human mitochondrial leucine aminoacylation identity
B Sohm et al.
JOURNAL OF MOLECULAR BIOLOGY (2003)
Amino acid discrimination by a class I aminoacyl-tRNA synthetase specified by negative determinants
TL Bullock et al.
JOURNAL OF MOLECULAR BIOLOGY (2003)
Yeast tRNAAsp charging accuracy is threatened by the N-terminal extension of aspartyl-tRNA synthetase
M Ryckelynck et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2003)
Leucyl-tRNA synthetase consisting of two subunits from hyperthermophilic bacteria Aquifex aeolicus
MG Xu et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2002)
Isolation of novel tRNAAla mutants by library selection in a tRNAAla knockout strain
H Choi et al.
BIOCHIMIE (2002)
Identification of essential domains for Escherichia coli tRNAleu aminoacylation and amino acid editing using minimalist RNA molecules
DC Larkin et al.
NUCLEIC ACIDS RESEARCH (2002)
Efficient aminoacylation of the tRNAAla acceptor stem:: Dependence on the 2:71 base pair
PJ Beuning et al.
RNA (2002)
Dual mode recognition of two isoacceptor tRNAs by mammalian mitochondrial seryl-tRNA synthetase
N Shimada et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2001)
Structural and mutational studies of the recognition of the arginine tRNA-specific major identity element, A20, by arginyl-tRNA synthetase
A Shimada et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2001)
Species-specific differences in the operational RNA code for aminoacylation of tRNATrp
F Xu et al.
NUCLEIC ACIDS RESEARCH (2001)
The structure of an AspRS-tRNAAsp complex reveals a tRNA-dependent control mechanism
L Moulinier et al.
EMBO JOURNAL (2001)
Translocation within the acceptor helix of a major tRNA identity determinant
MA Lovato et al.
EMBO JOURNAL (2001)
A succession of substrate induced conformational changes ensures the amino acid specificity of Thermus thermophilus prolyl-tRNA synthetase:: Comparison with histidyl-tRNA synthetase
A Yaremchuk et al.
JOURNAL OF MOLECULAR BIOLOGY (2001)
Nucleotides U28-A42 and A37 in unmodified yeast tRNATrp as negative identity elements for bovine tryptophanyl-tRNA synthetase
D Carnicelli et al.
FEBS LETTERS (2001)
Importance of the anticodon sequence in the aminoacylation of tRNAs by methionyl-tRNA synthetase and by Valyl-tRNA synthetase in an archaebacterium
V Ramesh et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2001)
Major tyrosine identity determinants in Methanococcus jannaschii and Saccharomyces cerevisiae tRNATyr conserved but expressed differently
P Fechter et al.
EUROPEAN JOURNAL OF BIOCHEMISTRY (2001)
tRNA aminoacylation by arginyl-tRNA synthetase: induced conformations during substrates binding
B Delagoutte et al.
EMBO JOURNAL (2000)
Search for characteristic structural features of mammalian mitochondrial tRNAs
M Helm et al.
RNA (2000)
Characterization and tRNA recognition of mammalian mitochondrial seryl-tRNA synthetase
T Yokogawa et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2000)
Aspartyl tRNA-synthetase from Escherichia coli:: Flexibility and adaptability to the substrates
B Rees et al.
JOURNAL OF MOLECULAR BIOLOGY (2000)
The free yeast aspartyl-tRNA synthetase differs from the tRNAAsp-complexed enzyme by structural changes in the catalytic site, hinge region, and anticodon-binding domain
C Sauter et al.
JOURNAL OF MOLECULAR BIOLOGY (2000)
Selection of viral RNA-derived tRNA-like structures with improved valylation activities?
J Wientges et al.
BIOCHEMISTRY (2000)
tRNA leucine identity and recognition sets
G Tocchini-Valentini et al.
JOURNAL OF MOLECULAR BIOLOGY (2000)
A domain in the N-terminal extension of class IIb eukaryotic aminoacyl-tRNA synthetases is important for tRNA binding
M Frugier et al.
EMBO JOURNAL (2000)
Identity of tRNA for yeast tyrosyl-tRNA synthetase:: Tyrosylation is more sensitive to identity nucleotides than to structural features
P Fechter et al.
BIOCHEMISTRY (2000)
Crystal structure of a eukaryote/archaeon-like prolyl-tRNA synthetase and its complex with tRNA(Pro)(CGG)
A Yaremchuk et al.
EMBO JOURNAL (2000)