Machine Learning Assisted Clustering of Nanoparticle Structures

We propose a scheme for the automatic separation (i.e., clustering) of data sets composed of several nanoparticle (NP) structures by means of Machine Learning techniques. These data sets originate from atomistic simulations, such as global optimizations searches and molecular dynamics simulations, which can produce large outputs that are often difficult to inspect by hand. By combining a description of NPs based on their local atomic environment with unsupervised learning algorithms, such as K-Means and Gaussian mixture model, we are able to distinguish between different structural motifs (e.g., icosahedra, decahedra, polyicosahedra, fcc fragments, twins, and so on). We show that this method is able to improve over the results obtained previously thanks to the successful implementa-tion of a more detailed description of NPs, especially for systems showing a large variety of structures, including disordered ones.

Automated summary

We propose a scheme for the automatic clustering of data sets composed of different nanoparticle structures using Machine Learning techniques. By combining a description of NPs based on their atomic environment with unsupervised learning algorithms, we are able to distinguish between different structural motifs. This method improves upon previous results by implementing a more detailed description of NPs, particularly for systems with diverse structures including disorder.