4.7 Article

Peptides for Coating TiO2 Implants: An In Silico Approach

Journal

Publisher

MDPI
DOI: 10.3390/ijms232214048

Keywords

TiO2 implants; osseointegration; titanium; molecular docking; molecular dynamics

Funding

  1. Fundacao de Amparo a Ciencia e Tecnologia do Estado de Pernambuco (FACEPE) [APQ-0516-9.25/19]
  2. Conselho Nacional de Desenvolvimento Cientifico e Tecnologico (CNPq) [442477/2019-8]
  3. Financiadora de Estudos e Projetos-FINEP (Materiais Avancados) [29401]
  4. Institute for Maternal and Child Health IRCCS Burlo Garofolo/Italian Ministry of Health [BioHub 03/20]

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The study focused on using in silico methods to identify peptides with potential for improving osseointegration of TiO2 implants, by docking analysis and MD simulations. 82 promising peptides were discovered, and three showed the highest binding stability during the simulations, offering a more efficient and time-saving approach for in vitro studies.
Titanium is usually used in the manufacturing of metal implants due to its biocompatibility and high resistance to corrosion. A structural and functional connection between the living bone and the surface of the implant, a process called osseointegration, is mandatory for avoiding prolonged healing, infections, and tissue loss. Therefore, osseointegration is crucial for the success of the implantation procedure. Osseointegration is a process mediated by bone-matrix progenitor cells' proteins, named integrins. In this study, we used an in silico approach to assemble and test peptides that can be strategically used in sensitizing TiO2 implants in order to improve osseointegration. To do so, we downloaded PDB structures of integrins alpha 5 beta 1, alpha v beta 3, and alpha IIb beta 3; their biological ligands; and low-cost proteins from the Protein Data Bank, and then we performed a primary (integrin-protein) docking analysis. Furthermore, we modeled complex peptides with the potential to bind to the TiO2 surface on the implant, as well as integrins in the bone-matrix progenitor cells. Then we performed a secondary (integrin-peptide) docking analysis. The ten most promising integrin-peptide docking results were further verified by molecular dynamics (MD) simulations. We recognized 82 peptides with great potential to bind the integrins, and therefore to be used in coating TiO2 implants. Among them, peptides 1 (GHTHYHAVRTQTTGR), 3 (RKLPDATGR), and 8 (GHTHYHAVRTQTLKA) showed the highest binding stability during the MD simulations. This bioinformatics approach saves time and more effectively directs in vitro studies.

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