Related references
Note: Only part of the references are listed.Crop wild phylorelatives (CWPs): phylogenetic distance, cytogenetic compatibility and breeding system data enable estimation of crop wild relative gene pool classification
Juan Viruel et al.
BOTANICAL JOURNAL OF THE LINNEAN SOCIETY (2021)
Macaronesia as a Fruitful Arena for Ecology, Evolution, and Conservation Biology
Margarita Florencio et al.
FRONTIERS IN ECOLOGY AND EVOLUTION (2021)
A strong east-west Mediterranean divergence supports a new phylogeographic history of the carob tree (Ceratonia siliqua, Leguminosae) and multiple domestications from native populations
Juan Viruel et al.
JOURNAL OF BIOGEOGRAPHY (2020)
StructuRly: A novel shiny app to produce comprehensive, detailed and interactive plots for population genetic analysis
Nicola G. Criscuolo et al.
PLOS ONE (2020)
Subspecies differentiation in an enigmatic chaparral shrub species
Yi Huang et al.
AMERICAN JOURNAL OF BOTANY (2020)
Museomics Unveil the Phylogeny and Biogeography of the Neglected Juan Fernandez ArchipelagoMegalachneandPodophorusEndemic Grasses and Their Connection With Relict Pampean-Ventanian Fescues
Maria Fernanda Moreno-Aguilar et al.
FRONTIERS IN PLANT SCIENCE (2020)
Editorial: Phylogenomic Approaches to Deal With Particularly Challenging Plant Lineages
Marcial Escudero et al.
FRONTIERS IN PLANT SCIENCE (2020)
Different species or genetically divergent populations? Integrative species delimitation of the Primulina hochiensis complex from isolated karst habitats
Lihua Yang et al.
MOLECULAR PHYLOGENETICS AND EVOLUTION (2019)
RAxML-NG: a fast, scalable and user-friendly tool for maximum likelihood phylogenetic inference
Alexey M. Kozlov et al.
BIOINFORMATICS (2019)
The application of high-throughput sequencing for taxonomy: The case of Plantago subg. Plantago (Plantaginaceae)
Gustavo Hassemer et al.
MOLECULAR PHYLOGENETICS AND EVOLUTION (2019)
A customized nuclear target enrichment approach for developing a phylogenomic baseline for Dioscorea yams (Dioscoreaceae)
Marybel Soto Gomez et al.
APPLICATIONS IN PLANT SCIENCES (2019)
A Target Capture-Based Method to Estimate Ploidy From Herbarium Specimens
Juan Viruel et al.
FRONTIERS IN PLANT SCIENCE (2019)
Factors Affecting Targeted Sequencing of 353 Nuclear Genes From Herbarium Specimens Spanning the Diversity of Angiosperms
Grace E. Brewer et al.
FRONTIERS IN PLANT SCIENCE (2019)
The present and future for population genetics, species boundaries, biogeography and conservation
Michael F. Fay et al.
BOTANICAL JOURNAL OF THE LINNEAN SOCIETY (2019)
Integrating phylogenomics, phylogenetics, morphometrics, relative genome size and ecological niche modelling disentangles the diversification of Eurasian Euphorbia seguieriana s.l. (Euphorbiaceae)
Bozo Frajman et al.
MOLECULAR PHYLOGENETICS AND EVOLUTION (2019)
A Universal Probe Set for Targeted Sequencing of 353 Nuclear Genes from Any Flowering Plant Designed Using k-Medoids Clustering
Matthew G. Johnson et al.
SYSTEMATIC BIOLOGY (2019)
Correlates of hybridization in plants
Nora Mitchell et al.
EVOLUTION LETTERS (2019)
nQuire: a statistical framework for ploidy estimation using next generation sequencing
Clemens L. Weiss et al.
BMC BIOINFORMATICS (2018)
ASTRAL-III: polynomial time species tree reconstruction from partially resolved gene trees
Chao Zhang et al.
BMC BIOINFORMATICS (2018)
A nuclear Xdh phylogenetic analysis of yams (Dioscorea: Dioscoreaceae) congruent with plastid trees reveals a new Neotropical lineage
Juan Viruel et al.
BOTANICAL JOURNAL OF THE LINNEAN SOCIETY (2018)
The long and short of doubling down: polyploidy, epigenetics, and the temporal dynamics of genome fractionation
Jonathan F. Wendel et al.
CURRENT OPINION IN GENETICS & DEVELOPMENT (2018)
Anchored hybrid enrichment generated nuclear, plastid and mitochondrial markers resolve the Lepanthes horrida (Orchidaceae: Pleurothallidinae) species complex
Diego Bogarin et al.
MOLECULAR PHYLOGENETICS AND EVOLUTION (2018)
Bridging the micro- and macroevolutionary levels in phylogenomics: Hyb-Seq solves relationships from populations to species and above
Tamara Villaverde et al.
NEW PHYTOLOGIST (2018)
Species concept and speciation
Amal Y. Aldhebiani
SAUDI JOURNAL OF BIOLOGICAL SCIENCES (2018)
Evolutionary history and biogeography of Mandragora L. (Solanaceae)
Sergei Volis et al.
MOLECULAR PHYLOGENETICS AND EVOLUTION (2018)
Integrative taxonomy improves delimitation in Hypericum subspecies
Cleusa Vogel Ely et al.
PERSPECTIVES IN PLANT ECOLOGY EVOLUTION AND SYSTEMATICS (2018)
Transcriptome analysis of Dioscorea zingiberensis identifies genes involved in diosgenin biosynthesis
Wenping Hua et al.
GENES & GENOMICS (2017)
Complementary Roles of Phenotype and Genotype in Subspecies Delimitation
Michael A. Patten et al.
JOURNAL OF HEREDITY (2017)
Opening the black box: an open-source release of Maxent
Steven J. Phillips et al.
ECOGRAPHY (2017)
Does infraspecific taxonomy match species evolutionary history? A phylogeographic study of Arundo formosana (Poaceae)
Laurent Hardion et al.
BOTANICAL JOURNAL OF THE LINNEAN SOCIETY (2017)
Late Cretaceous-Early Eocene origin of yams (Dioscorea, Dioscoreaceae) in the Laurasian Palaearctic and their subsequent Oligocene-Miocene diversification
Juan Viruel et al.
JOURNAL OF BIOGEOGRAPHY (2016)
Phylogenetic evidence for cladogenetic polyploidization in land plants
Shing H. Zhan et al.
AMERICAN JOURNAL OF BOTANY (2016)
Diversification into novel habitats in the Africa clade of Dioscorea (Dioscoreaceae): erect habit and elephant's foot tubers
Olivier Maurin et al.
BMC EVOLUTIONARY BIOLOGY (2016)
Typification of Dioscorea communis and its synonym Tamus communis var. subtriloba (Dioscoreaceae)
P. Pablo Ferrer-Gallego et al.
PHYTOTAXA (2016)
HYBPIPER: EXTRACTING CODING SEQUENCE AND INTRONS FOR PHYLOGENETICS FROM HIGH-THROUGHP UT SEQUENCING READS USING TARGET ENRICHMENT
Matthew G. Johnson et al.
APPLICATIONS IN PLANT SCIENCES (2016)
Cryptic Species Due to Hybridization: A Combined Approach to Describe a New Species (Carex: Cyperaceae)
Enrique Maguilla et al.
PLOS ONE (2016)
Metabolite profiling of Dioscorea (yam) species reveals underutilised biodiversity and renewable sources for high-value compounds
Elliott J. Price et al.
SCIENTIFIC REPORTS (2016)
POPART: full-feature software for haplotype network construction
Jessica W. Leigh et al.
METHODS IN ECOLOGY AND EVOLUTION (2015)
IQ-TREE: A Fast and Effective Stochastic Algorithm for Estimating Maximum-Likelihood Phylogenies
Lam-Tung Nguyen et al.
MOLECULAR BIOLOGY AND EVOLUTION (2015)
Trimmomatic: a flexible trimmer for Illumina sequence data
Anthony M. Bolger et al.
BIOINFORMATICS (2014)
Patterns and processes in plant phylogeography in the Mediterranean Basin. A review
Gonzalo Nieto Feliner
PERSPECTIVES IN PLANT ECOLOGY EVOLUTION AND SYSTEMATICS (2014)
The carnivorous plant described as Sarracenia alata contains two cryptic species
Bryan C. Carstens et al.
BIOLOGICAL JOURNAL OF THE LINNEAN SOCIETY (2013)
treePL: divergence time estimation using penalized likelihood for large phylogenies
Stephen A. Smith et al.
BIOINFORMATICS (2012)
NIH Image to ImageJ: 25 years of image analysis
Caroline A. Schneider et al.
NATURE METHODS (2012)
Extreme Reproduction and Survival of a True Cliffhanger: The Endangered Plant Borderea chouardii (Dioscoreaceae)
Maria B. Garcia et al.
PLOS ONE (2012)
Mining the Biodiversity of Plants: A Revolution in the Making
Vincenzo De Luca et al.
SCIENCE (2012)
STRUCTURE HARVESTER: a website and program for visualizing STRUCTURE output and implementing the Evanno method
Dent A. Earl et al.
CONSERVATION GENETICS RESOURCES (2012)
The Community Climate System Model Version 4
Peter R. Gent et al.
JOURNAL OF CLIMATE (2011)
Systematic Revision of the Epipetrum Group of Dioscorea (Dioscoreaceae) Endemic to Chile
Juan Viruel et al.
SYSTEMATIC BOTANY (2010)
Crops that feed the World 1. Yams Yams for income and food security
Robert Asiedu et al.
FOOD SECURITY (2010)
trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses
Salvador Capella-Gutierrez et al.
BIOINFORMATICS (2009)
Glacial refugia influence plant diversity patterns in the Mediterranean Basin
Frederic Medail et al.
JOURNAL OF BIOGEOGRAPHY (2009)
The frequency of polyploid speciation in vascular plants
Troy E. Wood et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2009)
Microcnemum coralloides (Chenopodiaceae- Salicornioideae): an example of intraspecific East-West disjunctions in the Mediterranean region
Gudrun Kadereit et al.
ANALES DEL JARDIN BOTANICO DE MADRID (2008)
ENVIRONMENTAL NICHE EQUIVALENCY VERSUS CONSERVATISM: QUANTITATIVE APPROACHES TO NICHE EVOLUTION
Dan L. Warren et al.
EVOLUTION (2008)
Inferring dispersal:: a Bayesian approach to phylogeny-based island biogeography, with special reference to the Canary Islands
Isabel Sanmartin et al.
JOURNAL OF BIOGEOGRAPHY (2008)
The diploid nature of the Chilean Epipetrum and a new base number in the Dioscoreaceae
Juan Viruel et al.
NEW ZEALAND JOURNAL OF BOTANY (2008)
Glacial survival, phylogeography, and a comparison of microsatellite evolution models for resolving population structure in two species of dwarf yams (Borderea, Dioscoreaceae) endemic to the central Pyrenees
Jose G. Segarra-Moragues et al.
PLANT ECOLOGY & DIVERSITY (2008)
Species concepts and species delimitation
Kevin De Queiroz
SYSTEMATIC BIOLOGY (2007)
Results of PMIP2 coupled simulations of the Mid-Holocene and Last Glacial Maximum -: Part 1:: experiments and large-scale features
P. Braconnot et al.
CLIMATE OF THE PAST (2007)
Simulating arctic climate warmth and icefield retreat in the last interglaciation
BL Otto-Bliesner et al.
SCIENCE (2006)
A Bayesian approach for discriminating among alternative inheritance hypotheses in plant polyploids:: The allotetraploid origin of genus borderea (Dioscoreaceae)
P Catalán et al.
GENETICS (2006)
A plastid gene phylogeny of the yam genus, Dioscorea:: Roots, fruits and Madagascar
P Wilkin et al.
SYSTEMATIC BOTANY (2005)
Rangewide phylogeography of a bird-dispersed Eurasian shrub: contrasting Mediterranean and temperate glacial refugia
A Hampe et al.
MOLECULAR ECOLOGY (2003)
Characterization of 10 trinucleotide microsatellite loci in the Critically Endangered Pyrenean yam Borderea chouardii (Dioscoreaceae)
JG Segarra-Moragues et al.
MOLECULAR ECOLOGY NOTES (2003)
Phylogeographical variation of chloroplast DNA in holm oak (Quercus ilex L.)
R Lumaret et al.
MOLECULAR ECOLOGY (2002)
MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform
K Katoh et al.
NUCLEIC ACIDS RESEARCH (2002)
Yams reclassified: a recircumscription of Dioscoreaceae and Dioscoreales
LR Caddick et al.
TAXON (2002)